KEGG   Oncorhynchus mykiss (rainbow trout): 110534024
Entry
110534024         CDS       T07259                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110534024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110534024
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110534024
 Complex B
    110534024
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 110534024
NCBI-ProteinID: XP_021474332
Ensembl: ENSOMYG00000012979
UniProt: A0A8C7PUA7
LinkDB
Position
10:complement(45003241..45010947)
AA seq 899 aa
MCSISMADKNGKKGKPVGVKRTLTKREQEDLKKKEQEKAADVFEEFLASFDSNDKSGVKT
FVRGGIVNATKEEEAAEVKKSKLYRPNTKFTSVSQNVSPAHSSEVRRPIVKKKTEEKKKS
NLELFKEELKQIQEEREERHKKKKNEPGGGYGELDIPLTRRSIFDDDPATPNTTNLYIGC
INPKMNEEMLCKEFGKYGPLASVKIMWPRSDEERTRVTNRGFVAFMTRKDAERALAALDG
KTVLGFEMKLGWGKAVRIPPQPLYTPIGVLKISTPPPPSGLPFNAQPRDRFRNDFTKPWG
RSKEEFDKTLSEAVVKVVIPTERNLLGLIHRMIEFVVREGPMFEAIIMSKEKNNPDFRFL
FDNKSQEQVYYRWKLYSILQGEPPSEWRTADFRMFRGGSIWRPPLLNPYLHGDEEAGEEE
QSPSQEEELKKGQLKTEHRERLETLLRGLTPRREDVGDAMLFCLERAEAAEEVVGCIAES
LSLLQTPLQKKIARLYLVSDILYNSCAKVANASYYRKYFEAKLPQIFGDISDAYRNIQAR
LQAEQFKQKIMGCFRVWEDWAVYPEPYLIQLQNIFLGLVKAGDEVIERVEVASPDLDGAP
LDGAPLDGAPLDDLDGSPLAWDPASLDGVPVDDIDGVPLGAPMDDIDGMPLDDLAHSKVA
LSKWERVDDAEALPQANTESKWDSVGERYSGDNMNVSTNTKEGDGESEGDSSDDDSPSKY
DSADFKSSLSSFEMSESKRSRLRELEVKVMQFQDELETGKRPRKSGMNMQKQVEHYRNKL
LQKEFDKDDQEKKERSTPKSKDRSKKEERRDKTEESSKGREKEKSKRSQDRDRSRDRGRS
RDTEERTQKYRGHSPSKTKSKSPKKSKRSRSPSPARKTWRRSSSRSPHRSHKKTKKSKH
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgtgcagtatcagcatggcagacaaaaatggcaagaaagggaaacctgtaggtgttaag
agaacattgaccaagagagaacaagaagatctgaagaaaaaggaacaagaaaaagcagct
gacgtttttgaagagtttttagcatcttttgacagtaacgacaaaagtggggtgaaaacg
tttgttcgtggggggatcgtgaatgcaactaaagaagaggaagcagcagaggtcaaaaag
agcaagctttaccgaccgaacacgaagtttacttcagtgtcccagaatgtctcaccagca
cactcttcggaagtcagaaggccgattgttaaaaagaagacagaagagaagaagaagagc
aaccttgaacttttcaaagaggagctaaagcaaatacaggaggaacgtgaagaaaggcac
aaaaaaaagaagaatgagcctggaggagggtatggagaattggacataccactaacacga
cgatcaatatttgatgatgacccagcaacaccgaacacaacgaacctgtacattggctgc
attaacccaaagatgaatgaagaaatgctttgcaaagagtttggcaagtatggtcccctg
gcaagcgtgaagatcatgtggccccgtagtgacgaggaacgtaccagggtcacaaacaga
ggcttcgtggcctttatgaccaggaaagatgcagagagggccttggctgctctagacggt
aaaacagttttgggttttgaaatgaagctgggatgggggaaagctgttcgcatccctccc
cagcctctctatacacccataggggtactgaaaatctccactcccccacccccctctggc
ctgcccttcaatgctcagccccgagaccgcttccgtaatgactttaccaagccatggggc
aggtctaaggaggagtttgacaagactctgtccgaagccgtagtcaaagtggttatccca
acagaaaggaatctgttgggcctcatccacaggatgatagagtttgtggtgcgtgaggga
cccatgtttgaagccatcattatgagcaaagagaagaacaaccctgacttcaggttcctg
tttgacaacaaaagccaggagcaggtgtactaccgctggaaactctactccattctccag
ggcgagccccccagtgagtggaggacggcagacttccggatgttccgtgggggctccatc
tggaggccgcccctcctgaacccctacctccatggagacgaggaggcgggagaggaggaa
cagtctccctctcaggaggaggagctgaaaaagggccagctgaagacagagcacagagag
agactggagacactgctgagagggctcacccctcgtagggaggatgttggtgatgccatg
ctgttctgtctggagagagccgaggcagcggaggaggtggtggggtgcatcgcggagtcc
ctgtctctccttcagacaccactgcagaaaaagattgccagactgtacctggtatccgac
atcttgtacaactcctgtgccaaagttgccaatgcatcttattatcgcaagtattttgaa
gcaaaattgccccagatatttggtgacattagtgatgcatatcgaaacatacaagcaaga
ctacaagcggaacaattcaagcaaaagataatgggctgtttcagggtctgggaagactgg
gccgtctacccagagccctacctgatccagctgcagaatatctttctgggtcttgtcaag
gcaggagatgaagtgatcgagagggtagaggtggcgtctccagacctggatggagcccca
ttggacggggcaccgttagatggagctccgctggacgaccttgacggctcgcccctggcc
tgggaccctgcctccctggatggggtgcctgttgacgacatcgacggagttcccctgggc
gctcccatggatgacatcgacggaatgcctttggatgatctggcccactccaaagtggct
ctgtctaaatgggagagggtggacgatgctgaagctctcccacaagctaacactgaatcc
aaatgggacagtgtgggagagcgatattctggggacaacatgaatgtaagtactaacact
aaggaaggagatggcgaatcagagggtgacagcagcgatgatgacagcccatctaagtac
gacagtgctgacttcaagagctccctcagtagttttgagatgtctgagagcaagaggagc
cggctgagagagctggaggtgaaggtgatgcagttccaggatgagctggagactgggaag
aggcccaggaagtccggaatgaacatgcagaaacaggtggagcactacaggaacaagctg
ctacagaaggagtttgataaggatgaccaggagaagaaagagcgatccacgccgaagtca
aaagacagatcaaagaaagaggagaggagagacaagacagaggagagcagtaaaggacgg
gagaaggaaaagagcaaaaggagtcaagaccgggataggagcagggacaggggacgtagt
agagacacagaggaacggacacagaaatacagaggacattctccctcaaaaacaaagtca
aagtctcccaagaagtccaagcggtcccggtcgccctcgccagccaggaagacgtggaga
aggtctagctcccggtcaccacaccgctcccacaaaaagacaaagaagagcaaacactga

DBGET integrated database retrieval system