Oncorhynchus mykiss (rainbow trout): 110534032
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Entry
110534032 CDS
T07259
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110534032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110534032
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
110534032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
110534032
NCBI-ProteinID:
XP_036846340
Ensembl:
ENSOMYG00000013751
UniProt:
A0A8K9UDQ9
LinkDB
All DBs
Position
10:45724817..45740843
Genome browser
AA seq
1253 aa
AA seq
DB search
MDVLDHMLTDPLDSEKANDGHITEECMLGDCRVSLPEDLLEDPEIFFTVLSESTWSKVLT
DEQRQHLRQLLPQFPDDNTSEQDCTISDLFNNQNFCFGNPLHLAQKLFGDGHFNPEVVMY
RELCAKSQKKCQLYSLQQYYHKLLKQILVSRKELLELAVRSGPDIAVKRKCPARTPGEMQ
EQRFRGRVCWILREVKTECGDRYPSSDDDASSLPTPRPPSSPTPTVFVRVLPSLSTQDMK
TTAKPELGEKDMRAMLRRHREKRRRQPDHPDLMTSDIHLGDMMSRVDVGRKGAMMALFEL
GRPKRKMRRKKMRRIKVESEDPCQALMPSEAPALSLDTPAALPDTPVPPLPSVKEEPLGE
VQNSPVMAEEIAVTFFNLLENILRLEGLASTAMLEEKVRQWQTSPASSRNPRFSSASCWS
EMVLPALHFLAGETKVGMMALPSGFTPCVVFRESSQQWKWIGPSENGEKDLSALCQLWVD
SKGLVVVKAECEELAEMTSPTPRASWTDYVVRSSTGDERHVFQVQEQQRYDQPHKAFTFR
MHGFESPVGPVKGVFDKEMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNGEGTRAE
ICELLKDSQFLAPDVTSAQVNMVVSGALDRLHYEKDPCVKYDIVRKLWNYLHRDRGQEEF
EKIHQAQAAAAKARKTLQQKPKLASKPSGSKEGGGKTSGGLEASHMGGPMSPTPSTLGTP
KSPLAPVATTPTKAGIPDSVKTGPGVLLVSPPPIPQLGTLLSSSQCGPQVSQPATSQHSA
RVVGHQSGSPPQVRVVSAQTARGQQAMLVHQTPRQIRVPVTVGAKGITQTVVSLPLRTLS
FGSPIQGQVARGQTTLSMSGLTTAQTGFPGSPAHHTASPAVLQGVTSQNIIQQVAITGQM
GVKAQGGAAISIAATDLRIQGKDVLHLPPYSKGQTVLRITPEMMATLTKSPVTTTKLTPD
MLGTATTKSISATLHLTPPQHSSPCSPASSSGGVLTNKASAGTTTLLKAAGDAMRLMPTL
AVAMAEQKDQTFSTVSSSDSKSGTTIRIMPGLGVIPQKRAKAITVTTATSSKPVSTGAAT
VPKATSGLAVAEGVTIGPSASGSLTLGTATDTVRQVPVTATVVSTQPGKLPARIPVPLSV
LSQPLKSKSGMTTPILKGNISTNISSLGRNIILTTMPAGTKLIAGNKPVSFVTAHQLQQL
QQQGQTTQVRIQTVPALQLQQLSAAGSPKSVSAAVVTTAPSPKRTPDPPPPAQ
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccttgatcacatgctgacagaccccctggactcagagaaggccaatgatggg
cacatcactgaagagtgtatgttgggagactgtcgagtgagccttccagaagacctgctt
gaggatcctgaaatcttcttcactgtgctgagtgaaagcacatggtctaaagtactgacc
gatgaacagaggcagcatctccgtcaattgttacctcagtttcccgacgacaacacctct
gaacaggactgcaccatcagcgacctcttcaacaaccagaacttctgcttcggaaacccc
ttgcaccttgcacagaaactgttcggagatggccattttaatccagaagtggtcatgtac
agagagctgtgtgccaagtcccagaaaaaatgccagctctactctttgcagcagtactac
cacaaactcctcaaacagatcctggtctctagaaaggaactactggagttggcggtccgc
agtggccctgacatcgcggtaaagagaaagtgccccgcccggacgcctggtgagatgcag
gaacagaggttcagaggaagagtctgctggatactaagggaagttaaaacggagtgtgga
gaccgatacccatcatctgacgatgatgcctcttcgctgccaacacctcggcctccttcc
tctcccacacctactgtctttgtcagggttctgcccagtctctccacccaggacatgaag
accacagctaaaccagagctgggagagaaggacatgagagccatgctacggagacataga
gaaaagaggagacgacaaccggatcatccagatttgatgacctctgacatccacttgggc
gacatgatgtctagagtggacgtgggtcgtaaaggagccatgatggcactgtttgaactg
ggtcggcccaagaggaagatgaggagaaaaaagatgaggagaattaaagtggagtccgag
gatccctgtcaggctctgatgccttcagaagctccagctctatcacttgacaccccagct
gctcttcctgacaccccagtccctccactgcccagtgtcaaggaagagccgttgggggag
gtgcagaacagccctgtcatggcagaggagattgctgtgaccttcttcaacctgctggag
aatatcctgagactagaggggctcgccagcacagccatgttggaggagaaggtccgacag
tggcagacatctccagctagttcccggaacccccggttctcctcggcctcctgctggtca
gagatggtgctgccggccctgcacttcctggctggggagactaaagttggtatgatggct
cttcccagtggcttcaccccttgtgttgtgttcagggaaagctcacagcaatggaaatgg
attggtccaagtgagaatggagagaaggatttgagtgctctgtgtcagctgtgggtcgac
tccaagggcctggttgtggtcaaggcagaatgtgaagaactagcagagatgacttctccc
acccctagagccagttggacagactacgtggtgcggtccagcactggagacgagaggcat
gtttttcaagtgcaggagcaacagcggtatgaccagccacacaaagccttcaccttcaga
atgcatggctttgagtctccggtggggcctgttaaaggggtctttgacaaggagatgtct
ctcaacaaagccagagagcacactctgctgcgctcggaccgcccagcctatgtcaccatc
ctctccctggtgcgggacgcagcagcccggctgcccaacggagaggggaccagggctgag
atctgtgagctgctcaaggactctcagttcttggcgccagatgtcaccagtgctcaggtg
aacatggttgtgagtggggctctggacaggctgcactatgagaaggacccctgtgtgaag
tatgacatcgtccgcaagctgtggaactacctgcaccgcgaccgcggtcaggaggagttt
gagaaaattcaccaggctcaagctgccgctgccaaggccagaaagacacttcagcagaaa
cctaaacttgcatccaagccttctggcagtaaggagggcggtggtaagacctctggaggc
ctggaagctagtcatatggggggtcccatgtccccaactcccagcacccttggaaccccc
aaatcacccctagcccctgtagccacaacccccaccaaagctgggatcccagattcagtc
aagaccggtcctggtgttctcttagtgtctcctccccccattcctcaactggggaccctg
ttgtccagcagccagtgtggcccacaggtctctcagccagctacctcccagcactcagcc
agggtagtgggccatcagtctggctctccgcctcaggtaagagtggtctctgcccagaca
gcaagaggacagcaggccatgttggtgcaccagacccctcgacagatcagagtgccagtc
actgtgggtgctaagggcatcacacagaccgtggtgtcgttaccactaaggaccctgtct
tttggtagccccatccaggggcaggtagccagagggcagacgaccctgtcgatgtcaggc
ctgaccactgctcagactggcttccctggcagccctgcacaccacacagcctcccccgct
gtcctacagggagtcaccagccagaacatcatccaacaggtggccatcacaggccagatg
ggcgtgaaggctcaaggtggagcagctatttcaatagccgctacggatctccgcatccag
ggcaaagatgtgctccacctgcccccctactccaaaggacagacggtgctgcggatcaca
cctgaaatgatggccaccctcaccaagtcccccgtcaccaccaccaaactcacccccgac
atgttaggcaccgccaccaccaagagcatatctgctactctccatttgaccccaccccaa
cactcctccccctgcagcccagcctcctcctcgggtggcgttctgacgaacaaagcctcc
gctggcaccaccaccctgctgaaggctgcaggggacgctatgcgcctgatgcccaccctg
gcggtcgctatggccgagcagaaggaccaaaccttctccaccgtctcctcgtctgactcc
aagagtggcaccaccatacgaataatgcccggactcggggtcatcccacagaaacgggcc
aaagccatcaccgtgacaacggccaccagcagcaaaccagtctccactggggctgcgact
gtccccaaagccaccagcggcttggccgtagctgaaggggtgacgattggcccttctgcc
tcaggctccctgactctgggaacagccacagatactgtccgccaggtccccgtcacagcc
acagtggtgtccacacaaccagggaagctaccagctcggatcccagtgcctctgtctgtc
ctcagccaaccacttaaaagcaagagtgggatgaccacgcccatactgaaaggaaacatc
agtacgaatatcagcagtctgggcaggaacatcatcctcaccaccatgcctgcaggcacc
aagctgatagctgggaacaagccagtcagctttgtcacggcgcaccagttacagcagctg
cagcaacaagggcagaccactcaggtgcgtatccagacggtgcctgccctgcagctccag
cagctctctgcagcaggctcccccaagtctgtgtccgctgccgtagtcaccaccgcaccc
tcacccaaacgaaccccggacccgccaccgccggcacagtga
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