Oncorhynchus mykiss (rainbow trout): 110534049
Help
Entry
110534049 CDS
T07259
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110534049
04121 Ubiquitin system [BR:
omy04121
]
110534049
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
110534049
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110534049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF7477
Motif
Other DBs
NCBI-GeneID:
110534049
NCBI-ProteinID:
XP_021474364
Ensembl:
ENSOMYG00000013849
UniProt:
A0A8C7VKI0
LinkDB
All DBs
Position
10:complement(45773830..45778106)
Genome browser
AA seq
873 aa
AA seq
DB search
MDFRGNMDFRGYPLSSSLAPNLRRRGERGATGLVLDRRKSTVWNYYIQLNEMYVECNICK
RQLSFHNSTTTMREHLVRKHNIRDNAPPVLDNTAVAGAPIPATSLQPRAQPGFPCNISTT
SATANTCMFQTDLHIVVKEEQQDADLSPEQGMAKRARITCAPPLDVGGGANAIPVTSHSG
ITTKESNGKRTGVLTYLILEMVYRDFQPLSVVEERGFRLLLSYLEPQYPVPSPSQLGSLL
WHHYDVLKRHLQQYLQSGLAPRCITLCTEYWQSVAGCAVGAGGRLFFTVSAHFVDKDWRL
ARCVLQTCPMPDIREKICERGFIQFGDTLKAVLSEFHLPQSSVFCVVHDTPRISEAKGTE
NMGVPKEKVNRTAGPHQSPQDLPEGWVALHCAGEALKLCIQDGLWMEPVRQALAEARRII
SHFQHDAPAAAALIHKAEAANKAGACLVLDDPGRWATAIDMCESLLELKWVVSSVLEEQK
AAPNLADHQWRLLQELVPVLKTVRIAASFLSEDINLSISALMPCLHGVSRVLEQHIAETS
CPVARGVMETVRSGMERQWRLGEEEALLDSPAVLSSFLDPRFKELRFLSPHARSRLHDKV
KELLSAQAQIEVEEMSRECDKGGEDEDGEEGREKEVRNRGLDHSQSTIAPLDSPVSCESN
EEGDIIVLQQQLKGLSQTAPSQVSGEGLGEGSRCSAGNGPRRVAGLSSLLKGDLQPPAYR
QVSHVPKSMYDILLGEDPTERMPEIHQQLGNYIAEPLCKRSLSPLHWWRSKEHRFPAVAR
LARTFLAIPATAVPADRAFAPRETTVAQRRAILGPQHLDHILFLHQNSDYVEKLMGGSTG
HEERGSDRNGAKQTLYQSLVSYESKAWVGGEKL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggatttccgagggaacatggatttccgagggtaccccctgtccagcagtctggcccca
aatttgaggagaaggggcgaacggggagcaacaggactggttctggataggcgcaagtca
accgtttggaattactacatccagcttaatgagatgtatgttgagtgtaatatatgcaag
aggcagttgtcttttcacaacagcactacgactatgagggagcaccttgtccgcaaacat
aatatacgcgacaacgcgccacctgtacttgataacacagcagtggccggggccccgatt
ccagctacatcactccagccaagggcccagcccggattcccctgcaacatctctactaca
tctgccacagccaacacatgtatgttccagacagatttgcacatagttgtaaaagaggag
cagcaggatgctgacttatctcctgaacaagggatggccaaacgtgcccgaatcacatgt
gctcctcccctagatgtaggaggcggtgccaatgcaatccctgtcaccagccatagtggt
atcaccaccaaagaatccaatggcaagcgtactggggttctgacttacctaatattggaa
atggtgtacagggactttcagccactgtctgtggtggaggagaggggatttcgtcttcta
ttgagctacttagaaccacagtacccagtgccgtctccctctcagcttggcagcctcctt
tggcatcactatgatgttctgaaacggcacctgcagcagtatcttcagtctggcctggct
ccacgttgcataacactttgcactgagtactggcagtccgtagcaggttgtgcggtggga
gcaggcggtcgcctcttcttcactgtaagtgcacattttgttgacaaagactggcgcttg
gcccgttgtgtgctgcagacctgtcccatgcccgatatcagggagaagatttgtgaaaga
gggttcattcaatttggggacacgctgaaggcagttctctctgaattccatcttccccag
agctctgttttctgtgttgtacatgacactcccaggatctcggaggccaaagggactgag
aatatgggagttccgaaagaaaaagttaatcgtactgctggaccacaccaatcacctcag
gatctcccagaaggctgggtagcgttacactgtgcaggggaagccctcaaactctgcatc
caggacggactatggatggaacctgtcagacaggctcttgcggaggcccgcaggattatc
tcacatttccagcatgatgcacctgctgccgccgctctgatccacaaggcagaagcggcg
aataaggcaggcgcttgtctagtgctggatgacccagggcgctgggcgactgctatcgac
atgtgtgagagtctgctcgagctgaagtgggtggtgagctccgttctcgaggagcagaaa
gctgctccaaatttagcggaccaccagtggcgcctcctccaggaactggtgccagtactt
aagaccgtgcgcatcgctgcctccttcttgagcgaggacatcaatttgtccatctccgcc
cttatgccgtgcctgcatggtgtatctcgtgtcctagagcaacatatcgcagagaccagc
tgccctgtggctcggggagtaatggagacggtgcggtcagggatggagcgacagtggaga
ctgggtgaagaggaagccttactggacagccctgccgtcctctcctcattcctggaccca
aggtttaaggagctgcgcttcctcagcccacatgcacgtagtaggctgcacgacaaggtc
aaggaactattatctgcccaagcacaaatagaggtggaggaaatgagcagagagtgtgac
aaaggaggcgaggatgaggatggcgaagagggaagggaaaaggaagtgaggaatcgggga
ttggatcactcacagtcaaccattgctcctctggattcacctgtgtcctgtgaatcaaat
gaagagggggacattattgtgctgcagcaacagttaaaggggctgtcccagactgccccg
tcacaggtcagtggagagggactgggtgaaggctcgcgctgcagtgctggaaatggtccc
aggagagtagcaggactgtctagcctgttaaaaggagacctgcagccccctgcttatagg
caagtgagtcatgtgcccaaaagcatgtacgacatactgcttggagaggatcccactgag
cgaatgcctgagatccaccaacagctggggaactacattgcagagccgctgtgcaaacgc
agcctgtcacctctccactggtggcgctctaaggagcatcgcttccctgccgtggccaga
cttgcccgcacatttctggctatccctgctactgctgtgcctgcagacagggcctttgct
cctagagagactactgttgctcaacgcagggccattctggggccccagcatttagatcat
attctattccttcaccagaacagtgactatgtggagaaactgatgggagggtctacaggg
catgaagagaggggcagtgacaggaatggagccaagcagactctgtatcagtctttagtg
tcctatgagagcaaggcttgggtgggaggggagaagttgtga
DBGET
integrated database retrieval system
