Oncorhynchus mykiss (rainbow trout): 110534143
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Entry
110534143 CDS
T07259
Name
(RefSeq) meckelin isoform X1
KO
K19348
meckelin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110534143
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
MKS complex
110534143
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Paralog
GFIT
Motif
Pfam:
Meckelin
Motif
Other DBs
NCBI-GeneID:
110534143
NCBI-ProteinID:
XP_036822827
Ensembl:
ENSOMYG00000016116
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Position
3:6259904..6277154
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AA seq
985 aa
AA seq
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MATGMLLVCGLALFLTIKSNLLHSQQFTISFQRPSDCSVEQFYDISSQSCVKCGPNQSTS
ATGLSCECVTGFRVLATNGASITCQQCPLEKTAVTEDGYGCILCPGSLTEQGTCQCPSGS
ILVERDVQGNPLEEARCEVCNGAEPALSAPNSYGDRCQRCQASLINTSQSCMCGSNILAG
GMCFPPNNLPTTVNPNVNYAELSLPVQSAWFSTNLYSSAAACLVYTNLTACQALGNMCVM
NMHSFSSVANDACGLYNTIFRATAALGSTQDISYWRANLPWLYYGDQPGLANRVLQTEPL
PTGFSFKGRNRNTDINLVAAVYNARGDFLQWEKVGGNNLQLCPDTARRQEAAYTFGTAYQ
ETCVLSVADLLRVYAEPLFYDVFVDLSRGEDRRLLPLPTRNLNQEYNRKFINQGNLNDWY
LSRRVLLVDTLSGREKSLGSLPKVIRIASSVRIGFQLVPGTQKGQVFPPLLSMTYSDVLI
TAPNTQTVSVSFAVDYEMDQAEAHMKTDIALGVLGGVSVLYSLVKTASWKRRIGSPLIDM
ETVLKFLLFYAGDLANVFFFITVGTGLYWLIFYKTVEAQHFVSVLLPLPGLQEERFVAYV
GCAFALKTVQFLHKLIQQLSVDIFFIDWERPRGKANKTIQGNGNGEAKHSPSPVSIWRTY
FVANEWNEIQTIRKISPTFQIMAVLFLLEVVGFSSLALRDPWSDLQRPPQSYSPPYSLTL
RYGLAATLWLCIGLLQIIFFTAFHERFVEDKIRQFVDLCSISNISVLLLSHRCFGYYIHG
RSVHGHADTNMEEMNINLKREAESLCGQRGLLPNTDTQTFQISITSRLRLQYDRILEPLS
RRNGPSRLVDAASGHPFDQSTKAYHTMNRFLGSVIDHAHRDMEYVVRDKLFFERVIGMEF
LEPMDKSIFYNDESHSFSDVLFYGNEATLLIFDTLFFCVVDLGAQSFILAGVLTYVQQMI
FRLIRNGIGQRNLANKTLVDKRFLI
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggggatgctacttgtgtgcgggttggcactatttctaacaataaaatcaaac
ctacttcactcccagcagtttacgatttcgtttcagcgtccttcagactgcagcgtggaa
cagttctacgacatctccagtcagtcctgtgtgaaatgcggaccgaaccagagtacgagt
gcaactggtctgtcttgtgaatgtgtgactgggttcagagttctcgccaccaatggagct
tccatcacctgtcagcagtgtccactagaaaaaacggcagtaacagaggatggctatggg
tgtatcctctgtccgggcagtctgactgagcagggaacctgtcagtgcccgtctgggagt
atactggtggagcgggatgtccaggggaaccctctggaagaggccaggtgtgaggtgtgt
aacggagctgaacctgccctctcagcccctaacagctacggagacaggtgtcagagatgc
caggcttccctcatcaacacctctcagtcctgtatgtgtggttccaacatcctggctgga
ggtatgtgtttccctcccaacaacctccctacaactgtgaaccctaatgtcaactatgcc
gagctgtcccttcctgtgcaatcagcatggttctccacaaacctctactcttcagcagct
gcctgcttggtgtatactaacctgacagcatgccaggcattggggaacatgtgtgtgatg
aacatgcactccttcagcagcgtggccaacgatgcctgtggtctctacaacactatcttc
agagctaccgcagccctgggatctacacaggacatatcctactggagagccaatctccca
tggctttactacggggaccagccgggtctggccaaccgcgtgctgcaaacagagccactt
cccactggattcagcttcaagggacgcaacaggaatacagacatcaacctagtggctgct
gtctacaacgccagaggagacttcctccaatgggagaaagtgggaggaaacaacctgcag
ctctgtccagacaccgccaggagacaggaggcagcttacacctttggcacggcctaccag
gagacttgtgttctctccgtagcagacctgttgcgtgtttatgctgagcctttattctac
gatgtgtttgtggatctgagccgaggagaggacaggagactgctcccccttcccacacgc
aacctcaaccaagaatacaacaggaagttcatcaaccaaggtaacttgaacgactggtac
ctatcgagacgtgtgttactggtggacactctgagtgggagagagaagagcctcggctct
ctgccaaaagtcatacgcattgcaagcagcgtcaggattgggtttcagctggtgccaggg
actcagaagggacaggtgttccctcctctcctctctatgacctactcagacgtcctcatc
actgccccaaacacacagactgtctctgtgtcgtttgctgtggactatgagatggaccag
gctgaggctcacatgaagactgatatcgccctaggtgtgttgggtggcgtttctgttctg
tattccctggtgaagacagccagctggaagaggaggattggctctcctctcattgacatg
gagaccgtattgaagttcctgttgttttacgctggtgatctggctaacgtcttcttcttc
atcaccgtgggaacaggcctgtactggctcatcttctataagacggtggaggcccagcat
tttgtgtcagtgctgctaccgttaccaggtctgcaggaggagaggtttgtggcgtatgtg
ggctgtgcctttgctctcaagactgtgcagtttctccataagctgatccagcagttgtca
gtggatatcttcttcatagactgggagagaccgcgcggcaaagccaacaagaccatccag
ggcaatggcaacggtgaggcgaagcacagcccttctcctgtcagcatctggaggacctac
tttgtggccaacgagtggaatgagattcaaaccatacgcaagatcagccccaccttccag
atcatggcagtgcttttcctactggaggtggttggcttctctagtctggcccttagggac
ccctggtcagatcttcagcgcccccctcagtcctactcccctccctacagcctgacgctg
cgctatggcctggccgccacactctggctctgcattggactgctgcagatcattttcttc
actgctttccatgagcgttttgtggaggataagatccgtcagtttgtggacctatgctct
atcagcaacatttcggtgctgctgctgtcccacaggtgttttggttactacatccacggg
cgctccgtccacggccacgctgacaccaacatggaggagatgaacatcaacctcaagaga
gaggccgagtctctgtgtggtcagagaggtctccttcccaacacagacactcagaccttc
cagatctccatcaccagccgcctacgcctgcagtacgaccgcatcctggagcccctcagc
aggagaaatggaccgtcgcggttggtggacgcagcatcgggacacccctttgaccagagc
accaaagcctaccacacaatgaaccgtttcctaggatcggtcatagaccatgcccatcgg
gacatggaatacgttgtgagagacaaactgttttttgagagagtcatagggatggagttc
ttggagcctatggacaagagcatcttctacaacgatgagtcccattcgttcagtgacgtg
ctgttctacgggaacgaagccactctgttgatctttgacacgctcttcttctgtgtggtc
gacctgggagcacagagcttcatactggcaggcgtactcacatacgtacagcaaatgatc
tttcggttaatccgtaacggtattgggcagagaaacctggccaacaaaacattggtggac
aagagattcctgatatag
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