KEGG   Oncorhynchus mykiss (rainbow trout): 110534143
Entry
110534143         CDS       T07259                                 
Name
(RefSeq) meckelin isoform X1
  KO
K19348  meckelin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:omy03037]
    110534143
Cilium and associated proteins [BR:omy03037]
 Primary cilia and associated proteins
  MKS complex
   110534143
SSDB
Motif
Pfam: Meckelin
Other DBs
NCBI-GeneID: 110534143
NCBI-ProteinID: XP_036822827
Ensembl: ENSOMYG00000016116
LinkDB
Position
3:6259904..6277154
AA seq 985 aa
MATGMLLVCGLALFLTIKSNLLHSQQFTISFQRPSDCSVEQFYDISSQSCVKCGPNQSTS
ATGLSCECVTGFRVLATNGASITCQQCPLEKTAVTEDGYGCILCPGSLTEQGTCQCPSGS
ILVERDVQGNPLEEARCEVCNGAEPALSAPNSYGDRCQRCQASLINTSQSCMCGSNILAG
GMCFPPNNLPTTVNPNVNYAELSLPVQSAWFSTNLYSSAAACLVYTNLTACQALGNMCVM
NMHSFSSVANDACGLYNTIFRATAALGSTQDISYWRANLPWLYYGDQPGLANRVLQTEPL
PTGFSFKGRNRNTDINLVAAVYNARGDFLQWEKVGGNNLQLCPDTARRQEAAYTFGTAYQ
ETCVLSVADLLRVYAEPLFYDVFVDLSRGEDRRLLPLPTRNLNQEYNRKFINQGNLNDWY
LSRRVLLVDTLSGREKSLGSLPKVIRIASSVRIGFQLVPGTQKGQVFPPLLSMTYSDVLI
TAPNTQTVSVSFAVDYEMDQAEAHMKTDIALGVLGGVSVLYSLVKTASWKRRIGSPLIDM
ETVLKFLLFYAGDLANVFFFITVGTGLYWLIFYKTVEAQHFVSVLLPLPGLQEERFVAYV
GCAFALKTVQFLHKLIQQLSVDIFFIDWERPRGKANKTIQGNGNGEAKHSPSPVSIWRTY
FVANEWNEIQTIRKISPTFQIMAVLFLLEVVGFSSLALRDPWSDLQRPPQSYSPPYSLTL
RYGLAATLWLCIGLLQIIFFTAFHERFVEDKIRQFVDLCSISNISVLLLSHRCFGYYIHG
RSVHGHADTNMEEMNINLKREAESLCGQRGLLPNTDTQTFQISITSRLRLQYDRILEPLS
RRNGPSRLVDAASGHPFDQSTKAYHTMNRFLGSVIDHAHRDMEYVVRDKLFFERVIGMEF
LEPMDKSIFYNDESHSFSDVLFYGNEATLLIFDTLFFCVVDLGAQSFILAGVLTYVQQMI
FRLIRNGIGQRNLANKTLVDKRFLI
NT seq 2958 nt   +upstreamnt  +downstreamnt
atggcaacggggatgctacttgtgtgcgggttggcactatttctaacaataaaatcaaac
ctacttcactcccagcagtttacgatttcgtttcagcgtccttcagactgcagcgtggaa
cagttctacgacatctccagtcagtcctgtgtgaaatgcggaccgaaccagagtacgagt
gcaactggtctgtcttgtgaatgtgtgactgggttcagagttctcgccaccaatggagct
tccatcacctgtcagcagtgtccactagaaaaaacggcagtaacagaggatggctatggg
tgtatcctctgtccgggcagtctgactgagcagggaacctgtcagtgcccgtctgggagt
atactggtggagcgggatgtccaggggaaccctctggaagaggccaggtgtgaggtgtgt
aacggagctgaacctgccctctcagcccctaacagctacggagacaggtgtcagagatgc
caggcttccctcatcaacacctctcagtcctgtatgtgtggttccaacatcctggctgga
ggtatgtgtttccctcccaacaacctccctacaactgtgaaccctaatgtcaactatgcc
gagctgtcccttcctgtgcaatcagcatggttctccacaaacctctactcttcagcagct
gcctgcttggtgtatactaacctgacagcatgccaggcattggggaacatgtgtgtgatg
aacatgcactccttcagcagcgtggccaacgatgcctgtggtctctacaacactatcttc
agagctaccgcagccctgggatctacacaggacatatcctactggagagccaatctccca
tggctttactacggggaccagccgggtctggccaaccgcgtgctgcaaacagagccactt
cccactggattcagcttcaagggacgcaacaggaatacagacatcaacctagtggctgct
gtctacaacgccagaggagacttcctccaatgggagaaagtgggaggaaacaacctgcag
ctctgtccagacaccgccaggagacaggaggcagcttacacctttggcacggcctaccag
gagacttgtgttctctccgtagcagacctgttgcgtgtttatgctgagcctttattctac
gatgtgtttgtggatctgagccgaggagaggacaggagactgctcccccttcccacacgc
aacctcaaccaagaatacaacaggaagttcatcaaccaaggtaacttgaacgactggtac
ctatcgagacgtgtgttactggtggacactctgagtgggagagagaagagcctcggctct
ctgccaaaagtcatacgcattgcaagcagcgtcaggattgggtttcagctggtgccaggg
actcagaagggacaggtgttccctcctctcctctctatgacctactcagacgtcctcatc
actgccccaaacacacagactgtctctgtgtcgtttgctgtggactatgagatggaccag
gctgaggctcacatgaagactgatatcgccctaggtgtgttgggtggcgtttctgttctg
tattccctggtgaagacagccagctggaagaggaggattggctctcctctcattgacatg
gagaccgtattgaagttcctgttgttttacgctggtgatctggctaacgtcttcttcttc
atcaccgtgggaacaggcctgtactggctcatcttctataagacggtggaggcccagcat
tttgtgtcagtgctgctaccgttaccaggtctgcaggaggagaggtttgtggcgtatgtg
ggctgtgcctttgctctcaagactgtgcagtttctccataagctgatccagcagttgtca
gtggatatcttcttcatagactgggagagaccgcgcggcaaagccaacaagaccatccag
ggcaatggcaacggtgaggcgaagcacagcccttctcctgtcagcatctggaggacctac
tttgtggccaacgagtggaatgagattcaaaccatacgcaagatcagccccaccttccag
atcatggcagtgcttttcctactggaggtggttggcttctctagtctggcccttagggac
ccctggtcagatcttcagcgcccccctcagtcctactcccctccctacagcctgacgctg
cgctatggcctggccgccacactctggctctgcattggactgctgcagatcattttcttc
actgctttccatgagcgttttgtggaggataagatccgtcagtttgtggacctatgctct
atcagcaacatttcggtgctgctgctgtcccacaggtgttttggttactacatccacggg
cgctccgtccacggccacgctgacaccaacatggaggagatgaacatcaacctcaagaga
gaggccgagtctctgtgtggtcagagaggtctccttcccaacacagacactcagaccttc
cagatctccatcaccagccgcctacgcctgcagtacgaccgcatcctggagcccctcagc
aggagaaatggaccgtcgcggttggtggacgcagcatcgggacacccctttgaccagagc
accaaagcctaccacacaatgaaccgtttcctaggatcggtcatagaccatgcccatcgg
gacatggaatacgttgtgagagacaaactgttttttgagagagtcatagggatggagttc
ttggagcctatggacaagagcatcttctacaacgatgagtcccattcgttcagtgacgtg
ctgttctacgggaacgaagccactctgttgatctttgacacgctcttcttctgtgtggtc
gacctgggagcacagagcttcatactggcaggcgtactcacatacgtacagcaaatgatc
tttcggttaatccgtaacggtattgggcagagaaacctggccaacaaaacattggtggac
aagagattcctgatatag

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