Oncorhynchus mykiss (rainbow trout): 110534223
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Entry
110534223 CDS
T07259
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110534223
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110534223
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
110534223
NCBI-ProteinID:
XP_021474622
Ensembl:
ENSOMYG00000023781
UniProt:
A0A060VUT3
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Position
10:50582305..50584800
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AA seq
319 aa
AA seq
DB search
MYNIIEHQLKSSVPSHHPGTGMPPANGVGGHEGGHTGSKLPTIQPDPMDKVKRPMNAFMV
WSRGERRKMAQENPKMHNSEISKRLGVAWKSLTDAEKRPFIDEAKRLRAVHMKDYPDYKY
KPRRKTKPMPKNNTLAAQYQMSAGNHLLSASAAQGQVGNPRMDAYGWGHTGGYTAAMQSE
ALGYSQQLHRYDLSALQYQSSMAQAQAYMNGANAYSPMSYNSSPQQVSPVMSMMKQQSDG
HSMSPSPTGPHSPLQQHHHQAHQQHQTQRGIQVQGDHLRDMISMYMPGGDASEAQRGYSV
SAANIQQHYLGGSAPLTHL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtataacattatagagcaccaactcaagtcctctgttccttcacatcatcctggaaca
ggaatgccacctgcgaacggagtaggggggcacgagggcggccacacaggttccaaatta
ccgacaatccaacctgacccaatggacaaagtcaagcggcccatgaatgccttcatggtc
tggtctcgcggtgagcgacgaaaaatggctcaggaaaatcccaaaatgcacaattctgag
atatccaaacggctgggtgtcgcgtggaaatctctaacagacgccgagaaaaggcccttc
attgacgaggctaagcgcctccgcgcggtgcacatgaaggattatccggactacaaatac
aaaccccgtcgtaaaaccaaaccgatgccgaagaacaatactctagccgcccagtatcag
atgtcggccggtaaccacctgctgagtgcgtccgcggctcagggacaagttggaaacccc
agaatggacgcatatggctggggccacacagggggctacactgcggcgatgcagagcgag
gcgctcggctacagccagcagcttcaccgctatgacctgtcagcacttcagtatcagtcc
agcatggcccaggcccaagcctacatgaatggtgccaacgcatacagccccatgtcctac
aacagcagcccccagcaggtcagcccagtgatgtccatgatgaagcagcagtctgatggc
cacagcatgtccccatcccccaccgggccccacagccccctccagcagcaccaccaccag
gcccaccagcagcaccagacccagcgtggtatccaggtccagggagaccatctcagggac
atgatcagcatgtacatgcctgggggagatgcctcagaggcccagagagggtactccgtc
tctgcagcaaacatccagcagcattacctgggagggtcagctccactcacccacctttga
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integrated database retrieval system
