KEGG   Oncorhynchus mykiss (rainbow trout): 110534284
Entry
110534284         CDS       T07259                                 
Symbol
primpol
Name
(RefSeq) DNA-directed primase/polymerase protein isoform X1
  KO
K22761  DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110534284 (primpol)
   03029 Mitochondrial biogenesis [BR:omy03029]
    110534284 (primpol)
Enzymes [BR:omy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110534284 (primpol)
    2.7.7.102  DNA primase AEP
     110534284 (primpol)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    110534284 (primpol)
Mitochondrial biogenesis [BR:omy03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA polymerase
    110534284 (primpol)
SSDB
Motif
Pfam: Herpes_UL52 DNA_primase_S
Other DBs
NCBI-GeneID: 110534284
NCBI-ProteinID: XP_021474723
Ensembl: ENSOMYG00000032187
LinkDB
Position
10:53878887..53902069
AA seq 548 aa
MNKGDWENRLKKVEQLAQSFQQCPLTSCYKPRLSRPWQPSSIWKLFPRQCMAINFAQSCS
EDVHVFALEKEQAKMGQRIFLVTSYSELWHYYSTYRQSLMHCYEVIPEGAVCKLYFDLEF
HRPSNKGFDGKCMVASLIQYVCEKLEEVYGIECSGKDVLNLDSSTEEKFSRHLIFILPNA
AFKDNLHVGQFIHLILQPVLSVNRRGSELENDMGGVTEDSGKRGLIGSPQAKRPRQEERD
LSFLLVKNKDGQDGLFVDLGVYTKNRNFRLYKSSKVGKNVAFTVAEDNRFITKPKRNVSA
EESLFQSSLISNVSFTSQKILTWDLHDERDGICPKPHAQLGSTSHCVSDSLGGYQCSPHK
EVDNFVLSVVKKDGIQGSIRRWNYFVSEQLLVYDILKYRWCQNVHRCHKSNNIMILVDLK
QEVWYQKCHDPACKSFRSSSYPLPQDICVSYLITMDEEDQAYLMDDVGNIELSQTLPVEK
YLGGSAATLPQEEDRDPWGDDQAYLEALEDVERSTGDLAEDDVPDELLLQTMAEFESLKD
LCLSATKC
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgaataagggtgattgggaaaacagattgaagaaggtggaacaactagctcagtccttc
cagcagtgtcctttgacctcatgctacaaacctaggctgtcccggccatggcagccatcc
tccatatggaagctcttccctcgtcaatgtatggctatcaactttgcacagagttgcagt
gaggacgtacacgtgtttgcacttgagaaggaacaggcaaagatgggtcagaggatcttc
ctggtcaccagttacagtgagctatggcattactacagtacctacaggcaatctctgatg
cattgctatgaggtgatcccagagggggcagtttgcaagctatattttgacttggagttc
cacaggccctccaataagggctttgatgggaagtgcatggtggcctccctcatccagtat
gtgtgtgagaagttggaggaggtgtatgggattgagtgctctgggaaagatgttctgaac
cttgactccagcacagaggaaaaattcagtcgccatctcatcttcattttaccaaatgca
gcttttaaggataacctacatgtcgggcaatttatccatttgattctgcaaccagtgctg
agcgtgaataggaggggaagtgaacttgagaatgacatgggtggagtcacagaggacagt
ggcaaaagggggctgattggaagtccacaggccaagaggcccagacaggaagagagggac
ctcagcttcctgttggtgaaaaacaaggacggacaggatgggctttttgttgacctcggt
gtgtacaccaagaacagaaacttccgtctctacaagtcatctaaggtggggaagaatgta
gccttcactgtcgcagaggacaacaggttcatcaccaagcctaaaaggaacgtctctgca
gaggagagcttgttccagtcctccttaatcagcaacgtaagtttcaccagtcagaagatt
ctgacatgggacctccatgacgagagggacgggatatgccccaagcctcatgctcagctg
ggttcgacttcacactgtgtttcagactctttgggaggctaccagtgttctccccacaaa
gaagtggacaactttgttctttctgtggtgaaaaaggatggcatccaaggaagcatacga
cggtggaattactttgtttcagagcagttacttgtctacgacatcctaaagtaccgctgg
tgtcagaatgttcaccggtgccacaaaagcaacaacatcatgattctggtggatcttaaa
caggaggtctggtaccagaagtgtcatgaccctgcttgcaagagcttcagatcttctagt
tacccattaccacaggacatctgcgtcagctacctcataacaatggatgaggaggaccag
gcatatctgatggacgacgtggggaacatcgagctcagccagacactcccagtggagaag
tacctggggggctcggcagcaacacttccccaggaagaagaccgcgatccctggggggat
gaccaggcttacctggaggccctggaggatgttgagagaagcacaggcgatttggcagag
gatgatgtcccagatgagcttctgctccaaaccatggcagagtttgagtccctcaaagat
ttgtgcttgtcggccactaagtgctaa

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