Oncorhynchus mykiss (rainbow trout): 110534322
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Entry
110534322 CDS
T07259
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110534322 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110534322 (cnga1a)
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110534322 (cnga1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
PFF1_TM
NPR3
Sec62
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
110534322
NCBI-ProteinID:
XP_021474786
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All DBs
Position
10:55266623..55277393
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AA seq
699 aa
AA seq
DB search
MISTSSTRPFLAVAPRISPNMATDTEEDSEDEIDETSPGPGRLFNVNNSNNTEEEEKKKK
KKEKKEKKEKKEKKKEKKKQKEQEEKEKEEKEKEEKEKEEKEKKEKEEKEKKEKEKKEGP
KEGFFINPAGSLYYNWLFIITIPVMYNWTMIIARACFEELQHNHLVTWMILDYISDVLYL
ADMAFRTRTAYLEQGLLVKDKKLLLERYISSLQFKLDAVSMLPTDVFYIYLGINYPEIRL
NKLLRITRMMEFFTRTETKTNYTNLFRISNLVMYIIIIIHWNACLYYSFSKSIGFGSDPW
VYPDLNDPEEPEFGELGRKYSFSLYWSTLTLTTIGETPSPELDSEFFFHVLDFLVGVLIF
ATLVGNISSMISNISAARVEFQARIDNIKQYMQKWKVDKELELRVITWFDYLWTNDKAQD
ERETLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLQPQVFSPGDYICKK
GDIGREMYIVKEGKLAVVADDGVKQFCVLGDGSYFGEISILAIKGSKAGNRRTANIRSIG
YSDLFCLSKDDLMESLTEYPEAKGMLEEKGRQILLKDGLLELDPSKIIPETTEIEEKVNR
MYSNLELMQTKLKKLLGDYSTSQRATRERIAEIERLTGEVVAEEDLDEEEKEGGEEEKEG
GEEEKEGGEEEKEGGEAEEKKDEEKKEEEEEEEEEEEKK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcacatcaagcactcgtccgttcctggcggttgcgcctcgcatttctccaaac
atggccacagacacagaggaggacagtgaggatgaaatagatgaaacctctcctggccca
gggcgtctgttcaatgtgaacaacagtaacaacactgaggaggaggagaagaaaaagaag
aaaaaggagaagaaagaaaagaaagagaaaaaagagaaaaagaaagaaaagaagaagcag
aaagagcaggaggagaaagaaaaggaggagaaagaaaaggaggagaaagaaaaggaggag
aaagaaaaaaaggaaaaagaggaaaaggagaaaaaggagaaagagaaaaaggaggggccc
aaagaagggtttttcatcaatccagcgggcagtctgtactacaactggctgttcattatc
acaataccagtcatgtacaattggaccatgataatagccagggcctgctttgaggagctg
cagcataatcacctagtcacctggatgattctggattacatctctgatgtcctctacctg
gctgacatggccttcaggaccaggacagcctacctggagcaaggcctgctggtcaaagac
aagaagctgctgttggagcgttatatcagcagcctccagttcaagctggacgctgtctcc
atgctgcccaccgatgtgttttacatctacctggggatcaactaccccgagatccgcctc
aacaagctcctccgaatcacgcgtatgatggagttcttcacccgcaccgagaccaagacc
aactacaccaacctcttccgcatctccaacctggtcatgtacatcatcatcatcatccac
tggaacgcctgcctctactactccttctctaagtccatcggcttcggctctgacccctgg
gtctacccggacctgaatgacccagaagagccagagtttggggaactggggaggaagtac
tccttcagcctctactggtccacgctgacgctgaccaccatcggcgagacgccatcaccg
gagctggactcagagttcttcttccatgtgctggacttccttgtgggtgtgcttatcttc
gccaccctggtgggcaacatcagctccatgatctccaacatcagcgccgcgcgggtcgag
tttcaggcacgcatcgacaacatcaagcagtacatgcagaagtggaaggtggacaaggaa
ctggagctgcgagtcatcacgtggttcgactacctgtggaccaacgacaaggctcaggac
gaaagggagacgctgcggtacctgcccgacaagctcagggccgaaatcgccattaacgtc
cacctggatactctcaagaaggtccgcatcttcgctgactgcgaagcaggcctgcttatt
gagctggtgctcaagttgcagcctcaggtcttcagccctggcgactacatctgtaagaag
ggcgacatcggccgtgagatgtatattgtcaaggagggcaagctggcggtggtggctgac
gatggcgtcaagcagttctgcgtgctgggagacggcagctactttggggagattagtatc
ctagcgataaagggttctaaggcagggaaccggaggacggccaacatccgcagcattggc
tactcagatctcttctgcctgtccaaggatgacctgatggagtcattgaccgagtacccg
gaagccaagggcatgctggaggagaaaggtcgtcagatcctgctgaaggacggcctgctg
gaactggacccttccaaaattatccccgaaaccacagaaatcgaggaaaaggtgaaccgc
atgtacagcaacctggagttgatgcagaccaagctgaagaagctgctgggagactacagc
accagccagagggccacgagggaacgcatcgctgagatagagaggctgactggagaggtt
gtagcagaggaggacctagatgaggaggagaaggagggaggggaggaggagaaggaggga
ggggaggaggagaaggagggaggggaggaggagaaggagggaggggaggcagaagagaag
aaggatgaggagaagaaagaggaggaggaggaggaggaggaggaggaggagaagaagtag
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integrated database retrieval system
