Oncorhynchus mykiss (rainbow trout): 110534432
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Entry
110534432 CDS
T07259
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110534432 (ssrp1b)
03036 Chromosome and associated proteins [BR:
omy03036
]
110534432 (ssrp1b)
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110534432 (ssrp1b)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110534432 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
110534432
NCBI-ProteinID:
XP_036789452
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All DBs
Position
10:61577353..61599395
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AA seq
706 aa
AA seq
DB search
MGDTLEFSDIYQEVKGSWNDGRLRFGRQSVVYKSSKTGKVDSIPAAELSQAQWRRVCLGQ
GIKLTTSTGHIYKYDGFRDTDFEKISEYFKAHYKVELSEKELCVKGWNWGTTKFSGPLLS
FEVSDSPAFEIPLASVSQCATGKNEVTLEFHQNDEAEVSLMEVRFYVPPGDTATTEEGPE
PVEVFRDRVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPY
TTVLRLFLLPHKDQRQMFFMISLDPPIKQGQTRYHFLILLFSKEEDLSLSLNMTEEEVEK
RYGGKLSKNMSGSLYEMVGRVMKALVNKKITVPGNFLGHSGTQCITCSYKASSGLLYPLE
RGFVYIHKPPVHLRFEEVSCVNFARGTTTTRSFDFEIETKQGTQFTFSSIEREEYGKLFD
FVTAKKLSIKNRGFKEKKGIKGKDDMLEDSDEDQHDAYLERMKEEGKIREEANDSDDSDG
ESDESFNPGEEEDDIAEEYDSKASASDSSAEGGDSDREKKKRPAKKAKVVKERKPRKKKP
KDSGAPKRPMSAYFLWLNASRESIKAEHPGISITEISKRAGEMWRELGKEQKVEWDGKAE
EAKKNYEVAMREYRESGGGSSAPSKKERKKKGGKSDEKNKKGTSGGGRERERERTTGNDS
FKSREFISSEESSSESDRGKGKRKRKGSDELEEVASTPPSSDSGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacacactggagttcagtgacatttaccaggaggtcaaagggtcatggaatgac
ggccgtctgcggttcggtagacagagtgtggtgtataagagcagtaagacagggaaggtg
gacagcatcccagctgcggagctgtctcaggcccagtggagacgtgtgtgtctgggacag
ggcatcaagctgaccaccagcaccgggcacatctacaaatatgacggcttcagagacacg
gactttgagaagatctctgagtacttcaaagcccactacaaagtggagctgtcagagaag
gaattgtgtgtgaagggttggaactggggcaccaccaaattctctggccctctcctgtca
ttcgaggtgagcgacagcccagcgtttgagatccccctggccagcgtgtcccagtgcgcc
acggggaagaacgaggtgacactggagttccaccagaacgatgaggcagaggtgtcactg
atggaggtccgcttctatgtcccgcccggggacactgccaccacggaagagggaccagaa
cctgtggaggtgtttagagaccgtgtgctgtccaaggcagatgtgatccaggctacagga
gatgctgtgtgtatcttcaaagagctgcagtgtctcacgcccaggggcaggtatgatatc
cgtatctacccgagcttcctccacctccacggtaagacgtttgactacaagatcccctac
accactgtgctacgtctcttcctgctaccacacaaggaccagagacagatgttcttcatg
atcagtctagacccgcccattaaacaggggcagacacgttaccacttcctcatcctgctc
ttctccaaggaggaggacctcagcctctccctcaacatgacagaggaggaggtggagaag
cgttatggggggaagctcagtaagaacatgtcaggttctctctatgagatggtcggcagg
gtgatgaaggctctggtcaacaagaagatcaccgtgccaggaaacttcctgggtcactcg
gggacccagtgtataacgtgttcctacaaagcgtcgtcaggcctgctctatcctctggag
aggggtttcgtctacatacacaagccccccgtacacctgcgcttcgaggaggtgtcgtgt
gtgaacttcgccagaggcaccaccaccacgcgctccttcgactttgagatcgaaaccaag
cagggcacccagttcaccttcagcagcattgagagagaggagtatgggaagctttttgac
tttgtgaccgccaagaagctcagcatcaagaacagaggattcaaagagaaaaagggtata
aagggtaaagatgacatgttggaggactcagacgaggaccagcacgatgcctacctggag
aggatgaaagaggagggcaagatcagagaggaggccaatgacagcgatgactccgatgga
gagagcgatgagtcttttaaccctggagaggaggaagatgacatagcggaagagtatgac
agtaaggcatcagccagtgacagcagtgcagaggggggagacagtgacagagaaaagaag
aagagaccagccaagaaggccaaagtggtgaaggagaggaaaccacgcaagaagaagccg
aaggacagtggcgcccccaagaggccgatgagcgcctatttcctgtggctgaacgcgagc
cgcgagagcatcaaagcagagcatcctgggatatccatcacagagatctccaagagggcc
ggggagatgtggagggaactggggaaggagcaaaaagtggagtgggatgggaaagcggag
gaggcgaagaagaactacgaggtagcgatgagggagtacagagagagtggaggaggatcc
tctgccccctccaaaaaggagaggaaaaagaagggagggaagagtgatgagaagaataag
aaggggacgtctggtggagggagggagcgagagagggagaggacgacaggaaacgacagc
tttaagagcagggagtttatctccagcgaagagagctcctcagagtcagacagaggcaag
ggcaaacgcaaacgcaagggttcagatgaactagaggaggtggcctcgaccccacccagt
tctgactcaggatcagactga
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