Oncorhynchus mykiss (rainbow trout): 110534537
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Entry
110534537 CDS
T07259
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110534537
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110534537
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110534537
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110534537
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110534537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
110534537
NCBI-ProteinID:
XP_021475101
Ensembl:
ENSOMYG00000005636
LinkDB
All DBs
Position
10:68449158..68459015
Genome browser
AA seq
1047 aa
AA seq
DB search
MDKILEALVSSSHSVPVKKAIVKKVVEAAEKEVTADQCQALYTLTTRLIFLGEDAFQKQV
GFQVLEAYARYHRADFELFFSKNFVLGLLQQGYGPLDRKDPAVVDYIHGCLRLLISCPSV
LDIFSIIQTEILRMVCERPEPALCACLATMLSDFVQCIPREKAAILFCQQLVRTIGYFHC
PASQERELREYVDQVTKVSTLLQNIWKAEPVTLLPSLQEVFAIISSTDPSFDPSIALASL
VQHIPLQMITVLIKSLTTDQNVKDTSMTQALCRMIDWLSWPLAHHVEMWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWYPIVRQGALVVLSHMLLSFQHSPEAFHLVVPHIVDLVQ
SLKQDGLPTSKAFLLHFTELVHCMMYQYSGFPDLYDDILEAIKELPGPGEEKIKLVLNQS
AWTSQSNSFASGLLRLPGKSETGKTGLINLGNTCYMNSIIQTLFSATDFRRHVLSLRLND
ATANTLMKKLQLLFTFLSHTQRAAYAPRVFFEASRPPWFNAGSQQDCSEYLRFLLDRLHE
EEKTIQVLMTAKPNVSPGNGPSDNTGGETSAKDAGVSPVAPVEGKSEGNDERTLIERMFG
GRLSTGIRCMTCNSVSEKEEPFTDLSLAFCPSTTSSPLQTEGPSEEPRGPCQGAVNGGSE
APEIGPSPKPVTASTTGVHFVPGSSEPPLSVPDLVDYFLAPEILDKENAYFCQKCGSLQR
AERGMRVVAAPEYLILTLLRFSYDAKCHVRRKILDNVTIPPLMRLPVHAPPPKHSSSSSS
PPSSPLQVDSPESSENLAKKLKPSQREEEETGLEGDNGMAGGENEVGVWPAAQFVPYVLS
SVVMHSGMSSESGHYYSYGRNLNGADGAQHHLANPLALGEEPGNGQTEPIALTCSGATHP
KQEVEVYGSQAAGDWLLFNDSRVTFTSLGSVQNVTNRFPKDTAYVLIYRKQDVTGGQNST
GGVTANGMRLGSEPPLQKELMDAVTKDNKLFLQEQELNARTRALQAASASCSFRPNGPDD
NEPPGSCGPSGGGGGGGGFNTVNRLVF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattctagaggcgctggtcagctcctctcactcagtcccagtgaagaaggcc
atcgtgaagaaggtagtcgaagccgcagagaaagaggtcacggcggaccaatgtcaggcc
ctgtacaccctcaccactcgcctcatcttcttgggtgaagacgccttccaaaaacaggtg
ggcttccaggtgctggaggcctatgcccgctaccaccgtgctgattttgagctcttcttc
agcaaaaactttgtcctgggcctgttacagcagggctatggccccctggaccgcaaggac
ccggccgtggtcgactacatccatggctgcctgcggctgctgatcagctgcccctctgtg
ctggatatcttctccatcatccagacagaaatcctaaggatggtgtgcgaacgccctgag
ccagccctgtgcgcctgtcttgccaccatgctctcagacttcgtacagtgcatcccccgg
gagaaggcggccatcttgttctgccagcagttggtgaggaccattgggtacttccactgt
cctgccagccaggagcgggagctgagggagtacgtggaccaggtgaccaaggtcagcacg
ttgctgcagaacatctggaaggcggagccggtcacactgctgccatctctgcaggaggtg
ttcgctataatctcctccactgacccctccttcgacccctccattgccctagccagcctg
gtccagcacatacctctccagatgatcacagttctcatcaagagccttaccaccgaccag
aacgtcaaagacaccagcatgactcaagcgctctgcaggatgattgactggttgtcctgg
cctctggcccaccatgtggagatgtgggtcattgccctgctgaaggggctggctgcggtg
cagaagttcaccatcctcatagatgtcaccctgcttaagattgaactggtgttcaaccgt
ctgtggtaccccatcgtgcgacagggggccctagtggttctctcccatatgctgctgagt
ttccaacactctcctgaggccttccacttggtcgtgccacacatagtggacctggttcag
agtctgaagcaggacggcctgcccaccagtaaggctttcctgctgcacttcacagagctc
gtccactgtatgatgtaccagtactctggcttccctgacctctacgacgacatcctggag
gccatcaaagagctacctgggcccggtgaggagaagatcaagctggttctgaaccaaagt
gcctggacgtcccagtccaactcgtttgcctcaggcctgctgaggctgccgggcaagtct
gagacgggcaagactggtctcatcaacctgggaaacacctgctacatgaacagtatcata
cagacactcttctcagccacagatttcaggaggcatgtcttatcgttacgtctgaatgat
gccactgccaacacactgatgaagaaactgcagctcctcttcaccttcctctcacacacc
cagagggcagcgtacgcccccagagtcttctttgaggcgtctcggcccccatggttcaat
gcaggatcccagcaggactgttctgagtacctccgcttcctactggacaggttacacgaa
gaggagaaaaccatccaggttctcatgacagccaagccaaatgtctcccctggcaacgga
ccgagtgacaacaccgggggtgaaacctctgcgaaggatgccggagtgtcacccgtggcc
cctgtggaggggaagtccgaggggaatgatgagaggacgctcattgagaggatgtttgga
ggcaggctgagcacgggtatccgctgtatgacatgcaacagcgtctcggagaaagaagaa
cctttcactgacctatccctggccttctgtccctccaccacctccagccctcttcagacc
gagggcccctcagaggaaccccggggcccctgccagggggctgtcaacgggggtagcgaa
gctcccgaaataggcccttctcccaaacccgtcacggcctccaccaccggcgtccatttt
gttcccgggtccagcgagccaccgctgtctgttcctgacctggtggactacttcctggcg
ccagagatcctggacaaggagaacgcctacttctgccagaagtgtggctcgctgcagcgg
gcggagcgggggatgagggtggtggcggcgcccgagtacctcatcctcacgctgctgagg
ttctcctacgacgccaagtgccacgtccgccgcaagatcctggacaacgtcaccatcccg
ccgctcatgagactgcccgtgcacgcccctccacccaaacactcttcgtcctcttcctcg
ccaccatcctctccactccaagtggactcgcccgagagcagcgaaaacctggccaagaaa
ctgaagccgtcacagagagaggaggaggagactgggctagagggcgacaacgggatggca
ggaggagaaaatgaggtaggggtgtggccggcggcccagttcgttccctacgtcctcagc
tctgtagtgatgcattctgggatgtcgtcggagagcggccattactactcctacggccgc
aacctcaacggggccgacggagcccaacaccacctagccaatcccctcgccctgggggag
gagcctgggaacgggcagactgagcccatcgcactcacttgctccggggcgactcatccc
aaacaggaagtggaggtgtacggaagccaggcggccggggattggctgctgttcaacgac
agcagggtgactttcacttcgttggggtcggttcagaacgtcaccaaccgtttccccaag
gacacggcctacgtgctgatctaccggaaacaggatgttaccggggggcagaacagtacc
gggggagtgacggccaacggcatgagactgggctctgaacctccgctgcagaaagaactg
atggacgccgtcaccaaggacaacaagctctttttacaggaacaggagctgaatgcgcgg
acccgagctctccaggcggcctctgcctcctgctcgttcaggcccaacggaccagacgac
aacgaacccccgggcagctgtggtccctcggggggaggaggaggaggtggggggttcaac
actgtcaacagactggtcttctga
DBGET
integrated database retrieval system
