Oncorhynchus mykiss (rainbow trout): 110534552
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Entry
110534552 CDS
T07259
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110534552
04040 Ion channels [BR:
omy04040
]
110534552
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110534552
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110534552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
RecX_HTH1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
110534552
NCBI-ProteinID:
XP_036810100
UniProt:
A0A8C7P0P3
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Position
19:9829419..9847684
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AA seq
915 aa
AA seq
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MSSTRVRSQQPQQNQAGRSPTGAAGASLPHRLDTSEGIEMENIQHQDLGLGGAIGTPSPP
SRQAWSRDNPGFEPEDEMMGADWPPASPGRRSVSTGSSSSCSSGLGSYTAGGSSTRIHRG
LYPTPTVDALQQDRHDIKSCGKRILEKIRILWGTQLMEDSDSSRERYLRNVLREMVTYVI
FLITLCILTYGMVGSNMYYYTKVMSQLFLDTPLSPGDTATFRSLSTMGEFWKFTEGPFLN
GMYWEVWYNNKSLPENHSMIYYENLLLGVPRLRQVKVRNESCSVHEDLRDEVQDCYNMYT
PSNEDSAPFGPMNGTAWMYTEENSLNGSSYWGQVATYGGGGYYQDLARSRDESAGLLRSL
KHQLWLDRGTRAVFLDFSVYNGNINLFCIARLVVEFPATGGIVTSWQFQTVRLIRYVSSW
DYFVGVCEVAFCLFILYYVVEEALEIRIHRLRYFKSVWNCLDVLIVVLSVSAIIINITRT
SVVSNRLKDLLENHSAHPSFEPLAHLQVTFNNMAAVIVLFSWVKLFKFINFNKTMSQLST
TMSRCAKDLIGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQACIFTQFRIILGDFEFSE
IEEANPVLGPIYFITFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGC
NKALMKLRLKKTTVDDISDSLRQAGGKLNFGELRQDLKGKGHTDEEIEAIFAKYDHGGDQ
ELTEHEHQQMRDDLEKEREDLDLERSSLPRPTSGRSFPRSHDDSEEDDDEDSGHSSRRRG
SSSGGVPYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRRDVLGKLLEGV
LEDERQGRDMDVQREQMERLVREELERWESDDTVSQVSHHQPATAIGPGAQPRPRPSSSL
STDGVDAGGNGSGHV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgactcgggtgagatcacaacaaccgcagcagaatcaggctggcaggtccccc
acgggcgcagcgggtgcgtccttgccgcacagattggacacaagcgaggggattgagatg
gagaacatacagcaccaggatttggggctcgggggcgccataggcacaccatcacccccc
tcaagacaagcctggagtcgggacaacccggggtttgaaccggaggatgagatgatgggg
gccgattggcctccggctagccctgggagaagatcagtgtccacgggctccagcagtagc
tgcagcagcgggttgggaagttacaccgctggagggagcagcacccgcatccaccgtgga
ttatacccgacgccgacagtggatgccctgcagcaagacagacatgacatcaaaagctgt
gggaagaggatactggagaaaataagaattctatggggtactcagctgatggaggacagt
gacagcagcagagagaggtacctgaggaacgtcctgagagaaatggtcacctatgtcatc
ttcctcatcacactgtgtatcttgacctatgggatggtgggctccaacatgtactactac
accaaggtgatgtcccagctcttcctggatacaccactgtccccgggggacacagccaca
ttcagaagcctctcaactatgggtgaattctggaagttcacagagggtcccttcctgaac
gggatgtattgggaagtgtggtacaacaacaagagtctccctgagaaccacagtatgatc
tactatgagaacctgctactgggggtgccccgcctccgccaggtcaaagttcgcaacgaa
tcctgctccgtgcacgaggaccttagggatgaggtgcaggactgctacaacatgtacacc
ccgagcaacgaggacagcgccccctttggccccatgaacggaactgcgtggatgtacaca
gaggagaacagcctgaatgggagtagttactggggccaggtggctacctacggtggaggg
gggtactaccaggacctggcccgttccagagatgagtcagctggcttgctacgctcccta
aaacaccagctgtggctggacagaggaaccagagccgtcttcctggacttctccgtctac
aacggcaacatcaacctcttctgtattgccaggttggtggtggagttccccgctacagga
ggcatagtcacttcctggcagtttcagacggtgcgtctgattcgctacgtgtccagctgg
gactactttgtcggggtgtgtgaggtggccttctgcctcttcatcctgtactacgtggtg
gaggaggccctggagatccgcatccaccgcctgcgctacttcaagagtgtgtggaactgc
ctggacgtcctcatcgttgtgttgagtgtttctgccataatcatcaacatcaccagaaca
tcagtggtgagcaatcgtctcaaagaccttctggagaaccacagcgcccaccccagcttt
gagcctctggcacacctccaggttacgttcaacaacatggccgcagtcatcgtccttttc
tcctgggtgaagctcttcaagttcatcaacttcaacaagaccatgagccagctgtccacc
accatgtctcgctgtgccaaggacctcatcggtttcgccatcatgttcttcatcatcttc
ctggcctacgctcagctggcctacctggtgtttggcacccaggtcaacgacttcagtacc
ttccaagcctgcatttttacccagttccgcatcatcctgggagactttgagttctcagag
atagaggaggctaacccagtcctgggacccatctacttcatcaccttcgtcttcttcatc
ttcttcatcctcatgaatatgttcctggccatcatcaatgacacctactcagaggtgaag
gcagacatgtcccagcagaggtctgagatggagatgacggacctcattaaaaagggctgt
aacaaagccttgatgaagctgagactgaagaagaccactgtggatgacatatcagacagt
ctgcgccaggccggtgggaaactcaacttcggcgagctccgccaggacctcaaaggaaag
ggccacacggatgaggagattgaggccatctttgccaaatatgaccacggtggggaccag
gagctgactgagcacgaacaccagcagatgagggacgacctggagaaagagagagaggac
ctggatctggagcgcagctcgttgcccagacccaccagtgggcggagcttcccccgtagc
catgacgactcggaggaggatgacgacgaggacagcggtcacagctcccgtcgccgcggc
agcagctcaggaggcgtgccctacgaagagtttcaagtgctggtgcgtcgtgttgaccgg
atggagcactccataggtagtatagtgtctaagatcgatgcagtgattgtgaagctggag
gccatggagagagctaagctcaagaggagagacgtgctgggaaaactgctggagggggtg
ctggaggatgagaggcaaggtcgtgacatggacgtccagagagagcagatggagcggctg
gtaagggaggagctagagcgctgggagtctgacgacactgtctcacaggtcagccatcac
cagcccgccactgccattggtccaggagcccaaccacgcccccgcccctcctcctccctt
tctactgatggggtggacgctgggggtaatgggagtggccacgtgtaa
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