Oncorhynchus mykiss (rainbow trout): 110534631
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Entry
110534631 CDS
T07259
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04514
Cell adhesion molecule (CAM) interaction
omy04518
Integrin signaling
omy04810
Regulation of actin cytoskeleton
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110534631
04514 Cell adhesion molecule (CAM) interaction
110534631
04518 Integrin signaling
110534631
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110534631
09142 Cell motility
04820 Cytoskeleton in muscle cells
110534631
04810 Regulation of actin cytoskeleton
110534631
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110534631
Cell adhesion molecules [BR:
omy04515
]
Integrins
Integrin alpha subunits
110534631
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
110534631
NCBI-ProteinID:
XP_036800535
UniProt:
A0A8C7Q350
LinkDB
All DBs
Position
2:29424822..29478401
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AA seq
1055 aa
AA seq
DB search
MCAYRMYAFGGMLCRVVSVLWPVLSIVSGFNLHAERPAVFRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPLNPDPTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKDKVVACAPLYHWRTVVNGEKDPVGTCYVAVQNFSAYAE
YSPCRTNDPNPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSLK
AVLRRVPGEKQTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVINS
TNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYLY
LQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIYN
GQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSVY
RARPVVSVEAEMILTPRILNPDDRSCLLTESDIMVTCLRVDICAKVSGVGIPDSVVLNAE
LQLDWLKGVRGGVKRVYFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTPI
SLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASIDRTELV
VGDDNLVMLTINAVNEGEGAYETELHTLLPPEADYIGVERRIEALSRLNCEYRMVNDSRL
VVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDSSKSNPVSLSLSISA
RAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQVG
WPSRFRDEHLLYALEVLTVGPISCRSNTSLNPLGLQTSSVQDTPELLGFLRNSSSPHRYR
RATNAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYLL
NSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAIPLWVIILAILLGLLVLAM
LTLAMWKCGFFDRARPPADDVSDREQLTSDQLADA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcctataggatgtatgcatttggtgggatgttgtgtcgcgtggtgtcggtgcta
tggcctgtcctttcgattgtctcgggcttcaacctgcatgcggagcgccctgcggtgttc
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccctaaaccctgaccccaccaagcaa
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtcacaccagtggtttggagcctcagttagaact
cacaaagacaaagtggtggcctgtgctcctctctaccactggcgtactgtggtgaacggt
gagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgcagaa
tactcaccctgtaggaccaatgatccaaacccggagggacagggtttctgccaggccggg
ttcagtgtggacttcaccaaggaggggacactggtggtgggtggacctggcagcttctac
tggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctgaaa
gccgtgctcaggagagtccctggagagaaacagacccacgctgcagctgatacccatgac
gacagctacctaggttactctgtggcagtaggggaattcacaggagactcagagcaagag
ctgatagctggtgttccgagaggggcacagaactttggatatgtagctgtgattaactcc
actaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggctat
tctgtggctgttactgacctcaacggagatgggtatgatgatgtactggtaggagcacct
ctctacatggagagagagagggagagtaaacctaaggaggtgggccgtgtctacctgtac
ctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacaccttt
ggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaacgac
gtggcagtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctacaat
ggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcctgg
gcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctggac
aacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtgtac
agggctcgtcctgtagtgtcagtggaggcagagatgatcctgactcctagaatcctgaac
cctgatgaccgatcctgcctcctgacagaatctgatatcatggtgacctgtctaagggta
gatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcctgaatgcagag
ctgcaactggattggcttaaaggtgtgaggggcggagttaagagagtttatttcctggat
tcccatcagccccaacacacaggggtcctaacgcttggccacagccgtcctcactcctgc
ctgaactatactgtctacctacgaggggaggatgagtttagggataaattgactcccatc
tcattggctctgaactacagtttagcccctccatccaacctggacctcccccctgtcctc
aaccgctacagcagtaccttcctgcaggaacaggcatatattctgctggactgtggggaa
gacaacgagtgtattccagacctccagctatctgcaagcatagaccgtacagagctggtg
gtcggggatgacaacctggtcatgttgaccataaacgcggttaacgaaggagagggggca
tatgagacagagctacacacactcctaccccctgaggctgattacataggagtggaacgc
aggatagaggctctatccaggttgaactgtgagtacaggatggtgaatgactccagactc
gtggtgtgtgacctggggaaccctatggttgccggaacagaagtatctgtaggtttaagg
tttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatccac
agttcaaacaaagacagctccaagagcaacccagtcagtctgtctctctccatctctgcc
agagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgtttcct
cattgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtcacacac
atctacgagctccataactcaggtcccagtagtatccgggaggcggagctccaggtgggc
tggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctgacagtcgga
ccaatcagctgccggagcaacaccagcctcaaccccctgggcctacagacatcctctgtc
caggacactccagaactgttgggctttctgaggaacagtagctctcctcaccgctacagg
cgagccaccaatgctgcccagccctacagcagcaagaccctgaactgcagtaacatcatt
tgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtcaag
atccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctcctc
aactccaccgtgtccttcagagtgacggccctgccctaccgcctccaaccctcctcctta
ccccaacacaccacttcaatgggtacactggtgctttggggaactcctgatgtggcgttt
gctattcctctgtgggtcatcatcctagccatcctactgggactgctggtcctggccatg
ctaacactggccatgtggaagtgtggtttctttgaccgggctcggccgccagcggatgac
gtgtcagaccgtgagcagctgacttctgaccaattagcagacgcctaa
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