KEGG   Oncorhynchus mykiss (rainbow trout): 110534631
Entry
110534631         CDS       T07259                                 
Name
(RefSeq) integrin alpha-8-like
  KO
K06584  integrin alpha 8
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04514  Cell adhesion molecule (CAM) interaction
omy04518  Integrin signaling
omy04810  Regulation of actin cytoskeleton
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110534631
   04514 Cell adhesion molecule (CAM) interaction
    110534631
   04518 Integrin signaling
    110534631
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110534631
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110534631
   04810 Regulation of actin cytoskeleton
    110534631
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110534631
Cell adhesion molecules [BR:omy04515]
 Integrins
  Integrin alpha subunits
   110534631
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 110534631
NCBI-ProteinID: XP_036800535
UniProt: A0A8C7Q350
LinkDB
Position
2:29424822..29478401
AA seq 1055 aa
MCAYRMYAFGGMLCRVVSVLWPVLSIVSGFNLHAERPAVFRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPLNPDPTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKDKVVACAPLYHWRTVVNGEKDPVGTCYVAVQNFSAYAE
YSPCRTNDPNPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSLK
AVLRRVPGEKQTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVINS
TNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYLY
LQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIYN
GQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSVY
RARPVVSVEAEMILTPRILNPDDRSCLLTESDIMVTCLRVDICAKVSGVGIPDSVVLNAE
LQLDWLKGVRGGVKRVYFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTPI
SLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASIDRTELV
VGDDNLVMLTINAVNEGEGAYETELHTLLPPEADYIGVERRIEALSRLNCEYRMVNDSRL
VVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDSSKSNPVSLSLSISA
RAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQVG
WPSRFRDEHLLYALEVLTVGPISCRSNTSLNPLGLQTSSVQDTPELLGFLRNSSSPHRYR
RATNAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYLL
NSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAIPLWVIILAILLGLLVLAM
LTLAMWKCGFFDRARPPADDVSDREQLTSDQLADA
NT seq 3168 nt   +upstreamnt  +downstreamnt
atgtgtgcctataggatgtatgcatttggtgggatgttgtgtcgcgtggtgtcggtgcta
tggcctgtcctttcgattgtctcgggcttcaacctgcatgcggagcgccctgcggtgttc
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccctaaaccctgaccccaccaagcaa
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtcacaccagtggtttggagcctcagttagaact
cacaaagacaaagtggtggcctgtgctcctctctaccactggcgtactgtggtgaacggt
gagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgcagaa
tactcaccctgtaggaccaatgatccaaacccggagggacagggtttctgccaggccggg
ttcagtgtggacttcaccaaggaggggacactggtggtgggtggacctggcagcttctac
tggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctgaaa
gccgtgctcaggagagtccctggagagaaacagacccacgctgcagctgatacccatgac
gacagctacctaggttactctgtggcagtaggggaattcacaggagactcagagcaagag
ctgatagctggtgttccgagaggggcacagaactttggatatgtagctgtgattaactcc
actaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggctat
tctgtggctgttactgacctcaacggagatgggtatgatgatgtactggtaggagcacct
ctctacatggagagagagagggagagtaaacctaaggaggtgggccgtgtctacctgtac
ctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacaccttt
ggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaacgac
gtggcagtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctacaat
ggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcctgg
gcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctggac
aacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtgtac
agggctcgtcctgtagtgtcagtggaggcagagatgatcctgactcctagaatcctgaac
cctgatgaccgatcctgcctcctgacagaatctgatatcatggtgacctgtctaagggta
gatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcctgaatgcagag
ctgcaactggattggcttaaaggtgtgaggggcggagttaagagagtttatttcctggat
tcccatcagccccaacacacaggggtcctaacgcttggccacagccgtcctcactcctgc
ctgaactatactgtctacctacgaggggaggatgagtttagggataaattgactcccatc
tcattggctctgaactacagtttagcccctccatccaacctggacctcccccctgtcctc
aaccgctacagcagtaccttcctgcaggaacaggcatatattctgctggactgtggggaa
gacaacgagtgtattccagacctccagctatctgcaagcatagaccgtacagagctggtg
gtcggggatgacaacctggtcatgttgaccataaacgcggttaacgaaggagagggggca
tatgagacagagctacacacactcctaccccctgaggctgattacataggagtggaacgc
aggatagaggctctatccaggttgaactgtgagtacaggatggtgaatgactccagactc
gtggtgtgtgacctggggaaccctatggttgccggaacagaagtatctgtaggtttaagg
tttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatccac
agttcaaacaaagacagctccaagagcaacccagtcagtctgtctctctccatctctgcc
agagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgtttcct
cattgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtcacacac
atctacgagctccataactcaggtcccagtagtatccgggaggcggagctccaggtgggc
tggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctgacagtcgga
ccaatcagctgccggagcaacaccagcctcaaccccctgggcctacagacatcctctgtc
caggacactccagaactgttgggctttctgaggaacagtagctctcctcaccgctacagg
cgagccaccaatgctgcccagccctacagcagcaagaccctgaactgcagtaacatcatt
tgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtcaag
atccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctcctc
aactccaccgtgtccttcagagtgacggccctgccctaccgcctccaaccctcctcctta
ccccaacacaccacttcaatgggtacactggtgctttggggaactcctgatgtggcgttt
gctattcctctgtgggtcatcatcctagccatcctactgggactgctggtcctggccatg
ctaacactggccatgtggaagtgtggtttctttgaccgggctcggccgccagcggatgac
gtgtcagaccgtgagcagctgacttctgaccaattagcagacgcctaa

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