Oncorhynchus mykiss (rainbow trout): 110534883
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Entry
110534883 CDS
T07259
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110534883
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
110534883
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
110534883
NCBI-ProteinID:
XP_036845962
LinkDB
All DBs
Position
10:31241426..31382578
Genome browser
AA seq
2185 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILCSFSRC
IKADVLSVWRRSQRPGRRELWLFWWGDDPNFAKLIHHELTAEEDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFARIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGESNVCTSVEI
NQHQPVYHLSDEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPSSKDKDKNDSPSEDKMEYMDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDIPAVV
PQGSSHCTAIYSGGHQVPASQRDPAISSVTLTPPTSPEDAHTGTMMDSQSALKWVKMSSA
VDGFSVDSTSHHELKIPRRLASQVVERVWQECNINRAQNKRKLSVTVNGTCEEELMEKVG
AWDFVESTHRSNCNCSRHKALKQRGGCTPGQPQSAGQPTHTQPPTKHKAGGDKPEKSDKQ
TKRPQTPFHHRSAACDDVTMETKAAGRRLAMRAQQEGGRFPGLHPTDGVTKTPQRHDGGV
GSAGGSSEMTGSPQPPPLSPHPCERDRGEETGDGSLKNPSTPHSQHFYQPPPEPCLAEQK
GGVGDHRGLDGLAQHFHHHHTAYPPEPLEPTVYVSSAVNLEEDGSPAPWRFFNLPRRKEA
AIPTPTLPWDKLRDRERDEASGGHEVVSVTELMATSKRPLKVSEERVQMYIQRRNQYLAA
AITDDDHEPEVDPYAFEDGDVKFSFSDKKDKTGGERQPGKKHKGEDGAAGPSDDAAREAA
NARTASTSLIHETDLAVSINDLDNLFNSDEDELTPGSRRAVNGTDNTFGTKEPKPAPLDP
VSCISSADLHQMFPTPPSLEQHIMGYSPMNMGSKEYGGLEVGQGMTNLDGASSLGGHFKI
EVEEGYCSPKPQEIKDFSFVYKPELCQAFVGCSMFAPMKTLPSQCLPPIKLPEECIYRPS
WTTVGKLEMLNHPHVPSMAYLNKDSNIPSVGSAMEQDYSQSYTPQTHTPFMSNSAPPSNS
GTGILPSPATPRFSAPTPRTPRTPRTPRGPASVQGSLKYENSDLYSPASTPSTCRPLNSV
EPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYLSDPTGE
AQYPCTCGFSAVVNRRYGNGSGLFLEDELDIIGRDSDVSREAEKRFEALRQHSLERTGGG
GRGERVPDELILLLQDQCTNPFSPMAGMEPDSLAARGPGGCPVPACVRVEERDYHSDCYM
ALEHGRQFMDNMSGGKVDEALVKSTCLHHWSKQNVVDVSALCSQDVLRVLLSLQPVLQDA
IQKKRTVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGL
PYWEKLLLDPFGSHRDVGYLVVCPDNEALLQGAKSFFRDLTAVYESCRLGQHQPISKGHP
DGIVRVGGSAAKKLAEQPVSDWFIKAASSNSDAFAKLKLYAQVCRHDLAPYLAAQPLDSS
LLTQPTPPPATNQSSSTQSSGSSSTTSACPQNSATPSLPNNNSSSVPSNNTGVANSANST
ASSGIQPSSGLQSAKPSSFPPFGTMSMQNQGQGGGTQGGQLGQQAGAQNAGLTGVDSASQ
AHSPTEPLESTMEREKVGVPTDGESHAITYPPAIVVYIVDPFTYEEPEAGSSVWTLGLLR
CYLEMLQFLPPHIRNSVSVQIIPCQYLLQPVRSEERHIYAQHLKSLAFSVFSQCRRPLPR
STNVKSLTGFGPGLAINTALKSPERPECLRLYTPPFILAPTKDKQTELGETFGEASQKYN
VLFVGYCLSHDQRWLLATCTDLYGELLETCIISIDVPNRARRKKGSARRSGLQKLWDWCL
GLVQMTSVPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSRRLKEMCRMCGISASDTPS
ILSACLVAMEPQCSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAF
VQVASSNYTTDTNIDIAFNPIPDGSDAIGIFDLLDQENELVDPDIINILPSSPTTSPVHS
PGGHYHQGGDGSKGQSTDRMESHDEAPNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQ
NQCPLFLKASLHLHVSSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAT
QDRRSCLPIHFVVLNQMYNFIMNML
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtaccaaacggggccagcttggaggattgccattccaatctattt
tgtctggcggacttgacggggatcaaatggaagcggtacgtgtggcaaggccccacctcg
gcacccatcctcttcccggtgaccgaggaggaccccatcctgtgcagcttcagccgctgc
atcaaagcggacgtgctgagtgtgtggcgacggagccagaggcccggacgtagggagctc
tggctcttctggtggggggacgaccccaactttgccaagctgatccatcacgaacttaca
gctgaggaagacggtgtgtgggagagtggtctgtcctatgagtgcaggacgctcctgttc
aaagcaatccataacctgctggagcggtgtctcatgaaccgtagcttcgcacgcatcggc
aaatggttcgtcaagccctacgagaaagatgagaagcccattaataagagtgaacacctg
tcatgctcgttcaccttcttcctccatggggagagtaacgtgtgcaccagcgtggagatc
aaccagcaccagccagtctaccacctgagtgacgagcacctcaccctggcccagcaggcc
tccagccccttccaagtcatcctaagtccgtttggtctgaacgggactctgacaggtcag
tcattcaagctgtcagaccctcccacccagaaactgatagaggagtggaaccagttctat
cccataagccccagctctaaagacaaggacaaaaatgactctccatcggaggacaagatg
gagtacatggactgggaggatgactcgctggccgctgtggaggtcctcgttggtggtgtg
aggatggtgtacccagcctgcctggtgctggtgccccagtctgacatcccggccgtggtc
ccccaggggtcctcgcactgcaccgccatctattctggtggccaccaagtgcctgcatcc
caacgagaccctgccatctcctcagtcaccctcacgcccccaacctcacccgaggatgcc
catacaggtacaatgatggactcccagtcggctctgaagtgggtgaagatgtcgtcggct
gtggacggcttcagtgtggacagcaccagtcaccacgagttgaagatccctcgcaggcta
gccagccaggtggtggagagggtctggcaggagtgcaatatcaacagagctcagaacaag
cgtaagctctcagtgacagtcaacggtacctgtgaggaggagctgatggagaaagtaggg
gcctgggactttgtagaatcaacacacaggtcaaactgcaactgctccaggcataaagcc
ctgaaacagcgaggtggttgtaccccgggccagccccagtcagcaggccagcccacccac
acccagccacccaccaagcacaaggctggaggtgacaagccagagaagagcgacaagcag
accaagaggccacagacacccttccaccaccgcagcgccgcctgcgatgacgttaccatg
gagacgaaggcggcaggccggaggcttgccatgagggcccagcaggaggggggtcgcttc
cctggcctccaccctaccgacggtgtcaccaagaccccccagcggcacgacggaggggtg
ggtagtgccggtggttcctcagagatgacaggttcccctcagccccctcccctcagcccc
cacccctgtgagcgcgacagaggagaggagacgggtgacggctctttaaagaacccctcc
accccccacagccaacacttctaccagccacccccggagccctgcctggcggaacagaag
ggtggcgtcggggaccaccgtggactggatggcctggcacagcacttccaccaccaccac
acggcctacccacccgagcccctggagcccactgtgtacgtaagctctgcagtcaacctg
gaggaggatggctccccagcgccatggaggttcttcaacctgcccaggaggaaagaggcc
gcaataccaacgccaacgctgccttgggacaagctgagggacagggagagagacgaggcc
tcgggaggacacgaggtggtgtctgtcactgagctgatggccacatctaagcggcctctg
aaggtgtcggaggagcgcgtgcagatgtacattcagcggaggaaccagtacctggccgcc
gccatcaccgacgacgaccacgagcctgaggtggacccgtacgccttcgaggacggggac
gtcaagttctccttctccgacaagaaggacaagacgggtggcgaacgccagcccgggaag
aaacacaagggtgaggatggagcagcaggtccatcagatgacgcagcacgagaagcagca
aacgcacgcactgcgtccactagcctaatccacgagaccgacctggccgtgtccatcaac
gaccttgacaacctcttcaactccgatgaggacgagctcacgcctggttccagacgtgcg
gtgaatggaacagataatacatttggcaccaaggaaccaaagccagcccctctggaccca
gtctcctgcatcagctcggcagacctgcaccagatgttccccactccccccagcctggag
cagcacatcatgggctactcccccatgaacatgggcagtaaggagtatggcggcctggag
gtcggacagggcatgaccaacctggacggtgcctcgtcccttgggggacacttcaagatt
gaagtggaggagggctactgcagccccaagccacaggaaatcaaggacttctcgtttgta
tacaagccggagctgtgccaggcatttgtgggctgctccatgtttgcccccatgaagacc
ctgcccagccagtgtctgccccccatcaagctgccagaggagtgcatctacaggcccagc
tggacaacagtgggcaaactggaaatgctcaaccacccccatgtgccttccatggcctac
ctcaacaaagacagtaacatccccagtgtgggcagtgccatggagcaggactacagccag
agttacacaccccagacccatactcccttcatgtccaacagtgccccccccagcaacagt
ggcacgggcatcctgccctcaccggccaccccacgcttctccgcccccaccccacgcact
ccccgtaccccacgcacccccagagggcccgccagtgtccagggttcgcttaagtatgaa
aactcggacctctactcgcctgcctccaccccctccacctgtcgacctctcaactcagtg
gaacctgccaccgtgccctccatccccgaggcccacagcctctacgtcaccctcatcctc
tctgagtccgtcatgaacctcttcaaggactgcaacttcgacagctgctgcatctgcgtg
tgcaacatgaacatcaagggggccgacgtgggggtgtacctgagcgaccccacgggagag
gcccagtacccctgcacctgcggcttcagcgcagtcgtcaaccgccgctacggcaacggc
tcgggcctcttcctggaggacgagctggatataatcggacgcgactcggacgtcagccgc
gaggcggagaagcgctttgaggcgctgcggcaacactcgctggagaggacagggggagga
gggaggggggagagggtaccagacgaactgatcttactactacaagaccagtgcaccaac
cccttctctcccatggctgggatggagcctgacagcctggcagcgcgggggcccgggggt
tgtccagtgccggcctgtgtgagggtggaggagagggactaccacagtgactgctacatg
gctctggagcacggccgccagttcatggacaacatgtcaggaggaaaggtggacgaggcc
ctggtcaagagtacttgtctacaccactggtccaaacaaaacgtggtggacgttagtgct
ctgtgctctcaggacgtattgcgggtgctgctctccctccagcctgtactccaggatgcc
atccagaagaagaggacggtgcgctcctggggtgttcagggacccctcacctggcagcag
ttccacaagatggctggacggggctcctacggcacagatgagtctccagagcccctgccg
atccctaccttcctggtgggttatgagtatgactttgtggtgctgtcgcccttcggcctg
ccctactgggagaagctgctgctggacccctttggctcccacagggacgtgggctacctg
gtggtctgtcccgacaacgaggccctgctccagggggctaagagcttcttcagggacctc
accgccgtctacgagtcatgtcgtctgggccagcaccagccaatctcaaaaggtcacccg
gacggcatcgtgagagtgggcggatcggctgctaagaagctagcggagcagcccgtcagc
gattggttcatcaaggctgccagcagcaacagcgatgccttcgccaaactcaagctctat
gcacaagtctgccgccacgacctcgctccatacctcgccgcacagcctttagacagctcc
ctcctcacacagcccacaccccctcctgccaccaaccaatcctcatccacacaatcctct
ggctcctcctccaccacctctgcttgcccccaaaactcagcgaccccctccctccccaac
aacaacagcagcagcgtgcctagtaacaacactggtgtagccaacagtgccaacagcacg
gcgtcgtcagggatccagcccagcagcgggctgcagtctgccaagcccagctccttccct
ccctttgggaccatgagcatgcagaaccagggccagggtggtggcacccagggagggcag
ctgggccaacaggctggagcccagaacgcaggcctcaccggggtggactcagccagccag
gcccactcacccactgaaccccttgagagcaccatggagcgagagaaggtgggtgtgccg
acggacggagaatctcatgccataacgtaccccccggccatcgtggtgtacatcgtggac
cccttcacctatgaggagcctgaggcggggtccagtgtgtggaccctgggcctgctgcgc
tgctacctggagatgctccagttcctcccaccacacatccgcaactctgtctctgtacag
atcatcccgtgccagtacctgctccagccggtgaggagcgaggagcgtcatatctacgct
cagcacctcaagtccctggccttctcagtgttctcccagtgcaggcgacccctccccaga
tccaccaacgtcaagtcgctgactggcttcggccccggcctggccatcaacaccgcactg
aagagcccagagagaccagagtgtttgcggctctacacgcctcccttcatcctggcaccc
accaaggacaagcagactgagctgggggagacgttcggggaggcctctcagaagtacaac
gtgctgtttgtgggctactgcctgtcccacgaccagcgctggctcctggccacctgcacc
gacctgtacggagagctgctggagacctgcatcatcagcatcgacgtgcccaacagagcg
cggaggaaaaaaggctctgcccggaggtcgggcctgcagaagctgtgggattggtgcttg
gggctggtgcagatgacatctgtgccatggagggtggtgataggtcgcttgggccgaatg
ggacacggcgagttgagagactggagtattctgctgagcaggaggaacctgcagtctcta
agtcgccgtctcaaggagatgtgtcgtatgtgtggcatctctgcctccgacactcccagc
atccttagcgcctgtctggtcgccatggagccacagtgctcttttgtcatcatgccagac
tctgtgtctacaggctcagtgtttggccgtagcaccactctgaacatgcagacgtcccag
ctgagtactccccaggacacgtcctgcacacacatcctggtgttccccacttcagccttc
gtccaggtggccagctccaactacactactgacaccaacatagacatcgccttcaaccct
atccccgatgggtcggacgccatcgggatctttgacctgctggatcaggagaacgagctg
gtggaccctgacatcatcaacatcctgccctcctcgcccaccacctcacccgtacactcc
cccggcggccactaccaccaggggggagacggcagcaagggtcagagtacggatcggatg
gaatcccatgatgaagctcctaacatcctgcagcagcccctggccctgggctactttgtg
tccacagccaaagccggcccactgcctgactggttctggtcagcctgccctcaagctcag
aaccagtgtcctcttttcctcaaggcctctctgcacctccacgtgtcttcagtgcaatca
gatgaactgctgcacagcaaacactcccatccccttgactccaatcagacctcggacgta
ctcagatttgtgctggagcagtacaatgccctctcttggctgacgtgtgaccccgcaacg
caggaccggcgctcctgtcttcccatccactttgtggtgctcaaccagatgtacaacttc
atcatgaacatgttgtaa
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integrated database retrieval system
