Oncorhynchus mykiss (rainbow trout): 110534888
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Entry
110534888 CDS
T07259
Symbol
dscama
Name
(RefSeq) Down syndrome cell adhesion molecule a isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110534888 (dscama)
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
DSCAM family
110534888 (dscama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
V-set_CD47
Ig_6
C2-set_3
Interfer-bind
fn3_2
Motif
Other DBs
NCBI-GeneID:
110534888
NCBI-ProteinID:
XP_036845987
Ensembl:
ENSOMYG00000026721
LinkDB
All DBs
Position
10:33730265..33913416
Genome browser
AA seq
2036 aa
AA seq
DB search
MWILAIIFFQCILNVFSEDLRSSLYFVNASVQEVVFASTTGTSVPCPAVGVPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHFNPSSFSNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYITVVSWEKDTVSINVQTPRFLSTSTG
ALYILDVQNEDGLYNYRCMTRHRYTGETRQSNSARLFLSDPTNSAPAILDGFEHREVMTS
HRVELPCKASGHPAPKFRWLKDNRPLEPDSRFRQSVTGLLIERAQPSDTGSYVCEVWNSY
GNAEVVGRLQVKEPLKAVVSPRKVKGSVGSQVSLSCSVSGSEEYELSWYRNGEIIYPGNS
VRMTGNNRENLVMAGMAKSDGGAYQCFARNGKMSAQDFVQVILEDGTPKIISSFSEKVFG
TNEFVSLFCTVKGTPEPRVTWTLDDEPVIRDSRHRIGHYTSQEGHVVSHLNISQTTGPDG
GVYRCICNNSAGAVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWHK
DANLLPYNHRQRAFENNGTLKLYDVQKDVDEGEYTCSVLVSPSLSTSQSVHISVKVPPTI
HPFEFPRFSIGQRVFIPCVVMSGDQPVFITWQKDGQPIPASLSVTIDNIDFTSSLRISNL
SLLHNGNYTCIARNQAAIVEHQSQLIVRVPPKFVVQPKDQDGIYGKAVILNCSAEGYPVP
TIVWKYSKGAGVPQFQPIALNSGFRIQVLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVS
KSMYLNVKIPAMITSYPNTTLATQGSEKRMSCTAHGEKPIMVRWEKEERIINPESSHRYV
VTVKEVADEVISTLQIRPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREV
KDRTIALRWTMGFDGNSPITGFDIECKNKSGSWEMAQRTKDVSPQLNQATIIDLHPSSTY
SIRMFAKNHIGKSEASNELTITTDEAAPDGPPQDVQLEAFSSQSIRVSWRAPKKHLQNGA
IRGYQVGYREFSTGGNYQFNVISMETTGDNDHSESVTLDNLKKFTQYGVVVQASNSAGTG
PSSQEVISTTLEDVPSRPPENVQATAASPEIISLSWLTPPKDALNGILLGFRVIYWANLP
DGELGEIRNVTTSKPSLELDGLEKYTNYSIQVLTFTRAGDGVRSEQIFTRTKEDVPGPPA
GVKAAAASNSVVFVSWLPPLKLNGIIRKYTVFCSNPHPTVSSEFEAAPDVFFYRIPNLSR
SRQYSIWVVAVTAAGRGNASDIITVKPQAEAPAQILTFNGTVTTPWMRDIVLPCKAVGDP
APTVKWLKETNGSPAPAVIDSRRIVQGNGSLVIRTVKAEDSGNYTCVASNSFGPDKIILN
LQVQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEKWGNFAISPSE
RSYRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQYSKEQELFTSINATRVR
LNLIGWNNGGCPITSFTLEYRSVESPTWTTAQRTSLTKSYILYDLAEATWYELQMKVFNS
AGSAEKRVKFSTLSYDGSTIAPLVKAPTVSVDSTSSNEGLKMVTIISCVLVGIVLVFVLL
LVLRRRRREQRLKRLRDAKSLAEMLMSKNTRPADTINKQQQTLRMHIDIPRAQLLIEERD
TMETVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSKSNP
TARRTAKAGPAARNRYASQWTLNRPHPPVSAHTLSTDWRLPTPRVTGSVDKESDSYSVSP
SQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAG
TNDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAAPKAHRPGGELVHLPPYLRMDF
LLNRGMSSSGTGGRGGTGGEGAMGQACLEPQKSRSLKRPSRMAPPTPTEAPQASNRASSR
DPVAQWQPGSAATLPHREGSELAQAAKLSTSQESLLDSRGHLKQTNNPYAKSYTLV
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctatcatctttttccagtgcatcttgaatgttttcagtgaagatcta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgtttgccagcaccaca
gggacctcggtgccctgtcccgccgtgggcgtgccccccgcctcgctgcgctggtacttg
gccaccggagaggaaatctacgatgtccccgggatccgccacgtgcaccccaatggcacc
ctccagatcttccacttcaacccctccagcttcagcaacctcatccatgacaacacctac
tattgcacagctgagaacccctcaggaaaaatcaggagccaagatgtccatattaaggct
gttctacgagagccctacacggtccgtgtggaggaccagaaagccatgagaggcaatgtg
gcggtgttcaagtgcattatcccagcctcggtggaggcctacatcactgttgtgtcctgg
gagaaagacacagtgtctatcaacgtccagacgcctcggttcctcagcacctccacagga
gccctgtacatcctggacgtgcagaatgaggatggattgtataactataggtgtatgaca
cgccaccgctacacgggagagaccaggcagagcaacagtgcacgtctctttttgtcagac
cccactaattcggcgccggccatcctggatggctttgagcatcgcgaggtgatgacatca
caccgggtggagctcccatgcaaggcatctggtcacccggcccccaaattccgctggctg
aaggacaaccgaccgctggagccggacagccgcttcaggcagagtgtgacgggcctgctg
atcgagagggcccagcccagtgacacgggaagctacgtgtgtgaggtgtggaacagctat
ggcaatgcagaggtggtggggaggctgcaggtcaaagagccgctgaaggcggtggtcagc
ccgaggaaggtgaaaggcagcgtgggtagccaggtgtctctgtcgtgcagcgtgagtggc
tcggaggagtacgagctgtcctggtaccggaatggagagatcatctaccctggaaacagt
gtccgcatgactggaaacaaccgggagaacctggtcatggctgggatggctaagagtgat
ggaggagcctaccagtgcttcgccaggaacggcaagatgtccgcccaggactttgtccag
gtcatcctggaagatggcacgcccaagatcatctcctccttcagtgagaaagtgtttgga
accaacgagtttgtttcactgttctgcacggtgaaaggcactccggagcccagggtgacg
tggacgctggacgacgagccggtgatcagggactcccgccaccgcatcggccactacacc
agccaggagggccatgtggtcagccacctgaacataagccagaccacggggccggacggg
ggtgtctaccggtgcatctgcaacaattcggccggggcggtctcctaccaggcgcgaata
aacgtaagagggcctgccagcatacgaccaatgaaaaatctcactgccattgctgggcgg
gacatgtatatccactgccgcgtcattggctacccgtactactccatcaagtggcacaag
gatgccaacctgctcccctataaccaccgacagcgggcgtttgagaacaatggcacgcta
aagctgtatgatgtacagaaggatgtggatgagggagagtacacgtgtagcgtgctggtc
tcaccttcgctctccaccagccaaagtgtgcacatcagtgtgaaagttcctcccaccatc
catcccttcgagttccctcgtttctccatcggccagcgtgtgttcattccgtgtgtggtg
atgtcaggtgaccagcctgtcttcatcacatggcagaaggacggtcagccaatcccggcc
agcctgagtgtaaccattgacaacatagacttcaccagctccctgcgtatctccaacctg
tctctcctgcacaatggcaactacacttgcattgcacgcaaccaggccgccatcgtggaa
caccagagtcagctaattgtcagggtccctcccaaatttgtggtgcagcccaaggaccag
gatggcatctatgggaaagctgtgatcctcaactgctctgcagagggataccccgtccct
accatagtgtggaagtattccaaaggtgcgggggttccccagttccagcctatagccctg
aactcaggcttccgtatccaggtgctggtcaacggctctctgctaatcaaacacgtgctg
gaggaggacagcggctactacttgtgtaaggtcagcaatgacgtgggagctgacgtcagc
aagtccatgtacctcaacgtcaaaatcccagccatgatcacgtcataccccaacaccacg
ctggccacgcagggcagtgagaagaggatgagctgcacggcccacggggagaaacccatc
atggtgcgctgggagaaggaagagcgcatcatcaacccggagagcagccaccgctacgtc
gtcaccgtcaaagaggtggccgacgaggtcatctccaccctgcagatccggcctacagtg
agggaagactcaggcttcttctcctgccatgccatcaactcctatggtgaagacagaggg
atcattcagctaacagtgcaagagcccccggaccctcctgaggtggagatcagagaggtg
aaggacaggaccatcgccctccgctggaccatgggcttcgatggaaacagcccaatcaca
ggcttcgacattgagtgcaagaacaaatcaggctcctgggaaatggcccaaaggaccaaa
gacgtgtctccccagctcaaccaggccaccatcatagacctgcacccctcctccacatat
agcatccgcatgttcgccaagaaccacatcggcaagagtgaggccagcaacgaactcacg
atcaccacagacgaagcagctcctgatggtcccccacaagatgtgcagcttgaagccttc
tcctctcagagcatcagagtctcctggagggcccctaagaagcacctccagaacggggcg
atccgtggctaccaggtgggctacagggagttcagcaccggggggaactaccagttcaac
gtcatcagcatggagacgacgggggacaacgaccacagtgagagcgtcaccctggacaac
ctgaagaagttcacccagtatggggtggtggtgcaggccagcaacagcgctgggacagga
ccctcctctcaggaggtcatctctaccacgttggaggacgttcccagccggcctccagag
aacgtccaggccacagcagcatctccagagataatctctctatcctggctgacccctcct
aaagacgctctcaacggcatcctgctcggcttcagagtaatctactgggctaacctgccc
gacggagagctgggggagatccgtaacgtgaccacctctaagccgtctctggagctggat
ggtctggagaagtacaccaactacagcatccaggtgctgaccttcacccgggccggggac
ggggtgcgcagcgagcagatcttcacccgcaccaaggaggacgttcctggtcctccggct
ggggtgaaggcagcggcggcgtctaactctgtggtgtttgtgtcgtggctccctcctctc
aaactcaacggcatcatcagaaaatacacagtcttctgctctaacccacaccccacggtg
agcagtgagtttgaagcagcgccagacgtcttcttctaccgtatccccaacctgagcagg
agccgccagtacagcatctgggtggtggccgtcaccgcagccggccgtggcaacgccagc
gacatcatcaccgtcaagccccaggccgaggctccagctcagatcctgacattcaacggc
acagtgaccaccccctggatgagggacatcgtgttgccctgtaaggcggtgggcgaccca
gcccccacggtcaagtggctcaaggagaccaatggaagccccgcccctgctgtgattgac
agtagacgcattgttcagggcaacggcagcctggtcatccgcacagtgaaagctgaggat
tctgggaactacacctgtgtggctagcaacagttttgggccagataaaatcatcctcaac
ctgcaggttcaagttcccccggaccagccacgtctcaccgttaccaagacgaccaccact
tccatcactctgtcctggataccaggagacaacggaggcagctccatacgaggctacatc
ctgcaatactcagaggacaacagtgagaagtggggcaactttgccatcagccctagtgag
cgttcctatcgactggagaacctgaagtgtggcacctggtacaagttcaccctgactgcc
cagaatgctgtggggccaggtcgcatcagtgagatcatcgaggctaagactcatgggaaa
gaaccccagtactctaaagaacaggagctcttcaccagtatcaatgccacgcgtgtcagg
ctcaacctgattggctggaacaatggcggctgtccaatcacatccttcacgttagagtac
cgttcggtggagtctcccacgtggaccacagcccaacgcacctctctgaccaagagctac
atcctgtatgacctggccgaggccacctggtacgaactacagatgaaggtgttcaacagc
gccgggtcagcagagaagagggtcaagttttccactctgagctacgatggcagtaccatt
gctccactggtgaaggctccaacggtgagtgtggacagtacgtccagtaacgagggtctg
aagatggtgaccatcatctcctgtgtgctggtgggaatcgtgctggtcttcgtcctgctt
ctagtcctcaggaggaggaggagggaacagagactgaagaggctcagagatgcgaaaagt
ttggcagagatgctgatgagtaaaaacacacgacctgcagacaccatcaacaagcagcag
cagacccttagaatgcacatcgacatcccccgagcccagctgctcatagaggagagagac
accatggagacagtcgacgacaggtccacagtgctgctgactgacaatgactttggggag
actcagaaacagaagtcatctacggttacccacaccgtccactaccagtccctgtcccag
gccaccggacctctagtggatgtatctgatgctaggccaggaaccagtaagtccaatccc
acagcccgccgcacagccaaagcaggccctgccgcacgcaaccgctacgctagccagtgg
accctgaaccgaccacacccgccagtctcggcccacaccctgagcactgactggagattg
cccacgccacgggtgaccggctctgtggacaaggagagtgacagctacagcgtcagccca
tctcaggacacagaccgggcacggagcagcatggtgtccacagagagcgcctcgtccacc
tacgaggagctggcgcgggcctacgagcacgccaagatggaggagcagctgcggcacgcc
aagtttaccatcacagagtgcttcatctcggatacgtcgtcggagcagatgacagcaggc
accaatgactacacagacagcctgacgtccagcacaccctccgagtcaggcatctgcagg
ttcactgcctccccgcccaagcctcaggatgtcagccgagtcatgaacatggccgcaccc
aaagctcacagaccggggggcgagctagtgcacctgcctccttacctgcgcatggacttc
ctgctgaaccgcggcatgtcgtcctcgggcactggagggaggggtggcaccgggggggag
ggggccatgggccaggcctgcttggagccccagaagagtcgctccctgaaacggccatca
cgcatggcacccccaactcccacggaggccccccaagccagcaacagggccagcagcagg
gacccagtggcccagtggcaacccggctcagcagccaccctgcctcacagagagggctca
gagctggcccaggccgccaagcttagcacctcccaagagtccctgctggactcacgagga
cacctcaaacagaccaacaacccctacgcaaagtcctacacgctggtataa
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