Oncorhynchus mykiss (rainbow trout): 110535014
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Entry
110535014 CDS
T07259
Name
(RefSeq) transcription factor Sox-17-beta.2-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110535014
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110535014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
110535014
NCBI-ProteinID:
XP_021475575
Ensembl:
ENSOMYG00000037618
UniProt:
A0A8C7TGN5
LinkDB
All DBs
Position
11:36189424..36191073
Genome browser
AA seq
325 aa
AA seq
DB search
MYFDRIPPHSDLCITKAMFESDEFCGASFQSEQMSETQSLGSVPSSHLSVNSDSGCSSPE
PKPLAEPRVRRPLNAFIIWTKEERRRLAKLNPELENKELSKMLGKTWKDMSLAEKRPYMQ
EAECLRVQHTIDHPKYKYRPRRKKQLKKGPKTLPVEALVPLNYLIQNHCHQHQAYLNTAI
YPNSQAYFSHMPGTFPNRSNYPDPSATFPNKLLEYSNTGTYPAEPHPYYSTQHGLQQCEV
PSPAYAVSHWEQGNFMAQGLQLFSSTDLSLELYLEQIHLDMLYDLDRSEFEQYLSPPPCR
PEPMESSYHQQGRPELCHLPYMAKI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtactttgatcggatccccccacattccgatctttgcataacgaaagccatgtttgaa
agcgacgagttctgcggtgcgtctttccagagtgagcagatgtccgagacgcagtccctc
ggctctgtcccatccagtcatctctcggtcaactccgactccggctgctctagtcctgag
ccgaaaccattggcagagccacgggtcagaaggccgctgaacgcctttattatctggacc
aaggaggaacgcagacgccttgccaaactcaaccctgaactggagaacaaggaactcagc
aaaatgctcggtaaaacttggaaggacatgtctctggcggagaagcggccctacatgcag
gaagcagagtgcctgagagtacagcacaccatcgaccaccccaagtacaagtaccggccc
cgcaggaagaagcagctgaagaagggccccaaaaccctacctgtggaggccctggtccct
ctcaactacctaatccagaaccattgccatcagcatcaagcctacctaaacacagccatc
tacccaaactcccaggcatacttctcccatatgcccgggaccttcccaaacaggtccaat
tacccagacccatcagccacattccctaacaagcttctagaatactctaacacagggaca
tacccagcagagcctcacccatactactctacccagcatgggctgcagcagtgtgaggtc
cccagcccagcctatgctgtgtctcattgggagcaggggaacttcatggcccagggcctc
cagttgttctcctccactgacctctctctggagctctatctggagcagattcacctagat
atgctgtatgatctggaccgcagtgagtttgaacagtacctgagcccgcccccatgcagg
cctgagccaatggagtccagttatcaccagcaaggcaggcctgaactatgtcatttgcca
tatatggcaaagatttga
DBGET
integrated database retrieval system
