Oncorhynchus mykiss (rainbow trout): 110535019
Help
Entry
110535019 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110535019
04121 Ubiquitin system [BR:
omy04121
]
110535019
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110535019
Membrane trafficking [BR:
omy04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
110535019
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110535019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
SPRY
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
U-box
Motif
Other DBs
NCBI-GeneID:
110535019
NCBI-ProteinID:
XP_036791360
LinkDB
All DBs
Position
11:40015466..40038754
Genome browser
AA seq
760 aa
AA seq
DB search
MSDTADTEENQDMLPGLVDQIVQRITAGEVPIKNIERELICPICKELFTHPLILPCQHSV
CHKCVRELLLLNHEDSFDAGSECSLPGSPGPRSRVPSPSMERLDRLARSATLQRRSFGRR
GSMSSPGWRRGSVTPRITTFPCPGCQHDVDLGERGMSMLFRNFTLESIVERYRQAARAAV
AIMCNMCKPPQQEATKSCMDCKASYCNECFKFHHPWGTPKAQHEYVGPTMNFRPKVLMCP
EHEMEKVNMYCEVCRRPVCHLCKLGGSHANHKVTTMSSAYKILKEKLSKAIHYLISKEDQ
VKTQISHLEVLINETEEKGQLAERRTDENFERLFETLQERKFEMLRSIEQSRTRRMDQLR
GQVDEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLHTRIAKSTESLRTFHPVADPSF
DEFVLDTSREETLLKELCFGGVPDPPIIDLSRSRVYNEGLVCWQLAEDTLATDHQVLEYR
KLGVEQDEEEGGSHWRPTVLVYGPSTVVCDLEANSLYSFRVRSCRNSFYSPYSPEVTFHT
PPAPVFGFLFNDKCGFSSERLTLSKLRDSVESAAGMAFLLAAERVQTGSYMGLDYIIGDT
GISQGRHYWAFRVEPHSYLVKVGVASDSKLLEWIHNPRDTSSPRYDHDSGHDSGSEDTCY
DLSQPFTLLTVGMGKVFIPKASISTAGNDHGNRVLPMPQRIGVYLDYEAGRVYFYDANTM
RCLYERQVDCTGTMYPAFGLMGSGKVQLEEFIAAKRLSYM
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatactgcggataccgaagaaaatcaggatatgttaccgggtttggtcgaccag
atagttcagcgaataacagccggagaggtccctatcaagaatattgagcgcgaactaatt
tgtccgatctgcaaggagctgtttacacaccccctcatcttgccctgtcagcacagcgtt
tgtcacaagtgtgtccgagagctgctgctattgaaccatgaggattctttcgatgcaggc
tcggagtgttccctccctgggagcccagggccccgatccagagtgccctcgccaagcatg
gagaggctggataggcttgcaagatcagccacactgcagagaaggtcgtttgggaggaga
ggctctatgtcctcaccaggatggaggcgtggctctgtgaccccccgcatcaccactttc
ccatgcccgggttgccaacacgacgtggacctgggcgagcggggcatgagcatgctcttc
cggaacttcaccctggagagcatcgtggagcgctaccggcaggcggcccgcgctgctgtt
gcgatcatgtgcaacatgtgcaagccgccccagcaggaggctaccaagagctgcatggat
tgcaaggccagctactgcaatgagtgcttcaagttccaccacccctggggcacccccaaa
gcccagcacgaatatgtgggtcccaccatgaactttaggcccaaggtgctgatgtgtccg
gagcatgagatggagaaggtcaacatgtactgcgaggtgtgccggcgtccagtctgtcat
ctgtgcaagctgggaggctcccacgccaaccacaaagtcacaaccatgagcagcgcctac
aagatcctcaaggagaagctatcaaaggctatccattacttaatcagcaaagaggaccaa
gtgaagactcagatttcccacctggaggtgttgatcaatgaaaccgaggagaaaggccag
ttggcggagcgtcggaccgacgagaactttgagcgactgttcgagaccctccaggagagg
aagtttgagatgctgcggtccatcgagcagtcgaggacgcggcgcatggaccagcttcgg
ggccaggtggacgagtaccagggcatgttggagaacagcggcctggtgggttatgcccag
gaggttctcaaggagacggaccagtcctgctttgttcagactgccaagcagctgcacacc
aggattgcgaaatccaccgagtctctgaggacattccaccctgtggccgacccctccttt
gatgagtttgtgctggacacttccagagaggagaccctgctgaaggagctttgttttggt
ggagtccctgaccctcccatcatcgatctgtcccgcagtcgcgtctacaacgaaggcctg
gtgtgctggcagttggctgaggataccctggccacagaccaccaggtgcttgagtacagg
aagctgggtgttgagcaggacgaggaggagggcggcagccactggcgccccacagtcctg
gtgtacggccccagcacagtagtgtgcgacctggaggccaacagcctctactcgttcaga
gtacgcagctgccgcaactccttctacagcccctacagcccagaagtcaccttccacaca
ccacctgctccagtgtttggcttcctgttcaatgacaagtgcggcttcagctcggagcgg
ctgacattgagtaagctgcgtgactcggtggagagtgcggccggcatggccttcctgctg
gctgctgagcgcgtgcagacaggcagctacatgggcctggactacatcatcggtgacaca
ggcatctctcagggcagacactactgggccttccgcgtggagccccactcctacttagtc
aaggtgggcgtggcctctgattccaagctgctggagtggatccacaacccccgggacact
agtagccccaggtacgaccatgacagtgggcacgacagtggcagcgaggacacgtgctac
gacctgtcccagcccttcaccctgctcaccgtgggcatgggcaaagtgttcatccccaaa
gcatccatctccaccgccggcaatgaccacggcaaccgggtgctgcccatgccccagcgc
attggcgtgtacctggactacgaggcgggccgtgtctacttctacgatgcaaacaccatg
agatgcctttacgagcggcaggtggactgcaccggtaccatgtatcccgcgtttggcctc
atgggtagtggcaaggtccagctagaggagttcatcgcagcaaagcgactgtcgtatatg
tga
DBGET
integrated database retrieval system
