Oncorhynchus mykiss (rainbow trout): 110535041
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Entry
110535041 CDS
T07259
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110535041 (tmc1)
03037 Cilium and associated proteins [BR:
omy03037
]
110535041 (tmc1)
Transporters [BR:
omy02000
]
Other transporters
Pores ion channels [TC:
1
]
110535041 (tmc1)
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110535041 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
Toddler
Motif
Other DBs
NCBI-GeneID:
110535041
NCBI-ProteinID:
XP_036792207
Ensembl:
ENSOMYG00000025248
LinkDB
All DBs
Position
11:complement(48079128..48090494)
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AA seq
940 aa
AA seq
DB search
RLPCLCFLFFTADEEDTVIDSDGRQERAKEKERKKERDRKRRRNVARRASSARKEGKELE
DRPGREERRGRKKRDKEGKGKGGEDERQEEVKNDTVAKTLKNFSNENTRKLEQKEIEVVG
EEDGDTEEKRKNGRSEKGGKREDNGRGETVEKKQKKKRVETSAEHESSEEEEDEEEKVGE
EKPEVLSPEELEKLKEEVDERKKLISTLRGKPWPMRKKLLTLRESHEFVEKYEGALGKGK
SRKLYAYKVMMLKKWMKFQRDFENFKTACVPWEMKIKEIESHFGSSVASYFIFLRWMYGI
NMILFGLTFGLVMVPEALMGRPYGSMPRKTVPRADEANAMDFAVLWDFGGYAQYSVLFYG
YYNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANEDGGGDNNSFNFSWKMF
TSWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVLANFLVLCCLAG
SGYLIYFVVRRSQKFALEGLESHSWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRIA
LQWQLGRIFALFLGNLYTFIIALMDEINLKREEEEVLKLNMTIWEASLYNGTLGVNSTAP
PITVHPADIPRGPCWETMVGQEFVRLIVSDTMTTYITLLIGDFLRAVLVRFLNYCWCWDL
EAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNV
PQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKSRMFDVIQETL
ESDFPAWFGKVFSYASNPGLVLPFLLLMVLAIYYLQSTSKSYKQANLELKKKLQTQNEEN
KKKTKMAALKAAMDLEEAQKAWSEAPRQQRNNNASQQSYTEDREKKGGEHRAHQGKSNHQ
IPPSATSPPAPRGHRIPGPLPGNQWQPAPSVQRVPNSQRH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
cgactgccatgtctctgttttttgttttttaccgcagatgaagaggacacagttattgac
tctgatgggaggcaggagagggcaaaagagaaggagagaaagaaagagagggacagaaag
agaagaagaaatgtagcaagaagagcttccagtgcaagaaaagaaggaaaggaattggag
gacagaccaggaagagaggagaggagaggacgaaaaaagagggataaggaggggaaaggg
aaagggggagaggatgagaggcaggaagaagtgaagaatgacacggttgctaaaactcta
aagaatttcagcaatgaaaacaccagaaaactggagcaaaaagagatagaggttgtagga
gaggaggatggggataccgaggagaagaggaaaaatggacgctcagaaaaaggcgggaaa
agggaggacaatggaagaggagagacagttgagaagaaacaaaagaaaaaaagggttgag
acaagtgcggagcatgagtcatcagaggaagaggaggatgaggaagagaaagtgggagag
gagaaaccagaggtcttgtctcccgaggagttggagaagctgaaggaggaagtggatgag
aggaagaaacttatctcgaccctaagaggaaagccttggcccatgaggaagaaactgcta
actctacgggagtcccatgagtttgtggagaaatatgagggagctcttgggaaaggaaag
agcagaaaactgtatgcatataaagtcatgatgttgaagaaatggatgaagtttcagagg
gactttgaaaacttcaaaactgcttgcgttccatgggagatgaaaatcaaagagattgag
agccattttggctcctcggttgcctcctacttcatattcctgaggtggatgtatggcatc
aacatgatcctctttgggctgacgtttggtctggtcatggtgccagaggctctgatgggc
aggccgtatggtagcatgcccagaaagactgtccctagagctgacgaagccaacgccatg
gactttgctgtcctatgggactttgggggctacgcccagtattctgtcctcttttatggc
tactacaacagccagcgcgccattggctggctcaagttccgcatgcccctctcctacttc
ctggttggcgtgggaactgtggcctatagctatatggtggtgataaggactatggcccgg
aatgctaatgaggacgggggcggagacaacaacagcttcaatttcagctggaagatgttc
accagctgggattacctcattggcaaccctgagacagctgacaacaagtttgcctccatc
accaccagctttaaggaggccattctggaggaacaggagagcaggaaggatgacaacatc
cacttgactcgttttctgcgggttctggccaacttcctggtgctgtgctgtctagcagga
agtggatatctcatctactttgtggtgcgtcgctcccagaagtttgctttagagggactg
gagagccatagctggtgggagaggaatgaggtgaacatggtgatgtccctcctggggatg
ttctgtcccatgctgtttgatgtgatcagtgcactagagaactatcacccccgcattgct
ctacagtggcagctgggacgcatcttcgccctattcctggggaacctttacaccttcatc
atcgcactcatggatgagatcaacctcaaacgagaggaggaggaggtgctgaagcttaat
atgactatatgggaggccagtctgtataatgggaccctgggagtgaatagcacagctcct
cccatcaccgtccaccctgccgatatcccacgaggaccctgctgggaaaccatggtggga
caggaatttgtccgactcattgtgtcggatactatgacaacctacatcacgctcctgatc
ggggacttcttgcgtgctgtgctggtgcgtttcctcaactactgctggtgttgggacttg
gaggctggatttccctcctactcagagttcgatgtcagtgggaatgtcctgggcctgatc
ttcaaccaaggcatgatatggatgggtgcgttctatgccccttgcctgcctgctctgaac
gtgctgagactgcatgtgtcaatgtacctgcagtgctgggccgtcatgtgctgtaatgtt
cctcaggagagggtgttcaaggcctcaggctccaacaacttctacatggctatgctactg
gtcatccttttcctctcaacactgcctgccatctacaccatagtcactatccccccctcc
ttcgactgtggccccttcagtgggaagagccgcatgtttgatgtgatccaggagacgctg
gaatctgatttccctgcctggtttgggaaggtgttcagctacgcctccaaccctggcctg
gtgctgcctttcctactgctgatggttttggccatttattacttgcagtctacatccaaa
agctacaagcaagccaacctggagttaaagaagaaacttcaaacccaaaatgaagagaac
aagaagaagactaaaatggcagcactgaaagctgccatggatttagaggaggctcaaaaa
gcttggtcagaagcaccgcggcaacagagaaacaacaacgcctctcagcaatcttatacg
gaagatagagaaaagaagggtggggaacacagagcacatcaaggaaagagcaaccatcaa
attcccccttctgccaccagccccccggccccgaggggccacagaatccctgggccccta
ccaggtaaccagtggcaaccagcacccagtgttcagagggtcccaaactcccagagacac
tga
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