Oncorhynchus mykiss (rainbow trout): 110535069
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Entry
110535069 CDS
T07259
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110535069
Cilium and associated proteins [BR:
omy03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
110535069
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_SusR
TPR_16
RPN7
TPR_17
DUF6340
TPR_11
TPR_14
TPR_NPHP3
TPR_BSK1_C
TPR_9
TPR_6
TPR_19
PUB
TPR_YpiA_C
HlyE
Wzy_C_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
110535069
NCBI-ProteinID:
XP_036791779
Ensembl:
ENSOMYG00000011002
LinkDB
All DBs
Position
11:complement(57860984..58189524)
Genome browser
AA seq
2480 aa
AA seq
DB search
MEKQATFKEKFSIFGSRTVGSAARLVGEEEGGRCGLSNAEFIERVQQSNEACQRGDFQAA
LSLYGDALRADPQNCILYSNRSAAFHKLGCYQAALDDAVKARLLNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAAHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNAEKSTGYM
QQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALTNKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEQPIEMRAY
AGLGHAARCMQDLERAKQYHEQQLAIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLSITQELSDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPGVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLGIARDTQDRPLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEETGRPARQG
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVTEGGPDLH
EGGGGGVASGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTVSPAKDGCSSLPCRPSNLNKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIQ
GLGISSKGHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWLWGPMPSAEEEALMVSELLG
CHPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTPNPESIPGGAGAGVGTGGRG
AGGGKRGSGGKGRKGSFGSSYTIPESLHLQDDGSDAESICDSPPLQEFLLTAADILDLRL
PVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVSASKVFVHAFYTAL
LNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPE
RARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWHALLTAVGFRLDSAG
TGIPAAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCKLITASEAGEQLINRAVKNM
VGMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVL
KTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQFVSNPLPLGYPSLP
FSPPCLDSLASDAISVYSLSSVASTMSFASKSECDFLGHRQRGGATAHFSAHKHLHIPRS
RSSPHGAAAAAAGVGRGDDEEYEGFSIISSEPLGSHCDSLPLPPGHGQRHLHRGGRGVVS
SSSSGTGRGYQVSVSSRGSVSTPTSPVKTSLVPSPNPPLQKVPGKVSSSDTGESDQSSTE
TDSTVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGAEGTAAGATSARSSAFRS
SETSAFSRPSSSASVRVQSSPRPKPPSRSSSLQKISSGYNSPAASETSLKDGSHPSPTLD
SHAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPACSAPSPALSYSSTGSACSSPADAPD
LDRLRRGVIDEKVVAIHNLKTFWANTASQQQQQHLGPVRALRSAPGPLVSAKRDVLSLLN
LSPRHCSPSDAQDSLELRELGLQSLDRGNKNPSNGHNPRKMAPSPSISTSSSPGPRSIRL
PAGNGYKFLSPGRFFPSSKC
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcaacttttaaggaaaagttttcaatcttcggctcccggacagttggc
agtgcggcacggcttgtgggtgaagaagaagggggccgatgtggcctcagcaatgcagag
ttcatagagagagttcagcagagcaacgaggcgtgccaacgcggtgacttccaggctgcc
ttgagtctctatggcgacgccctgcgagccgacccacagaactgcatcctctacagcaac
cgctcagcagcctttcacaaactgggatgctaccaggctgccctggacgacgctgtcaag
gcccgtctactcaaccccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcgttggccgccttcgcctcggggctggcccaagacccc
aagagcctgcagctactggttggcatggtggaggctgccatgaagtccccactacgagag
tccttagaacccacctaccagcagctgcagaagatgaagctggacaagagtccattcgtg
gtggtgtcagtgattggtcaggagctgctgacggcggcccaccacaccgcatctgtggtg
gtcctggaggccgcgttaaagatcggcacctgcagcctcaagctgcgtggctccgtcttc
tcagccctcagcagcgcccactggtccctgggcaatgcagagaagagcaccggatacatg
cagcaagacctggaggtttccaagacactaggtgaccaaacaggtgaatgccgtgcccat
ggcaacctgggctcagcattcttctccaaggggaactaccgcgaggccctgaccaaccac
cgccaccagctggtcctggctatgaagctcaaggacagggaggcagcttctatggctctg
agcagcctgggtcatgtgtatacagccatcggggactaccctaatgccctggccagccac
aagcagtgtgtcctactggcaaagcaatccaaagaccagctgtcagaggcacgagagctg
ggcaacatgggcgctgtctacattgctatgggcgactttgaaaacgctgtacaatgccac
gagcagcacctgggcatcgccaaggccctgaccaacaagagggaggaggcccgtgcctac
agcaacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccac
acccatgtactggagctggcccaggagctggaggagcagcctatagagatgagggcgtac
gctggactgggtcatgctgcacgctgcatgcaggacctggagagagccaagcagtaccat
gaacagcagctggccatcgctgagggcctgaaggacagagctgcagagggaagagcctcc
tccaacctgggcattatccaccagatgaaaggagactatgagactgcacttaaactccac
aaaacccacctctccatcacccaggagctcagtgactatgctgcccagggccgggcctac
ggtaacatgggcaatgcctacaacgcgctgggggcctttgaccaggccgtacgctaccac
cgccaggagctacagatctccatggaggtcaatgaccgggcctcacaggcctccacccat
ggtaacctggccgtggcctaccaggccctgggggcccacgatcgtgccctgcagcactac
cagaaccacctcaatatcgcccgtgagctgcgagacgtccagagcgaggctcgcgccctc
ggcaatctgggaaacttccactgctcccggggagagttcccccaagccgtgccctactac
gagcagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgc
cacaacttgggctacgcccactactgcctgggaagctatcaggacgctgtcaagtactat
gagcaggacctggctctggctaaggacctgcatgacaagctgagccaggccaaggcctac
tgtaacctgggactggccttcaaggctctgggtgacttcaccaaggcagaggagtgtcag
aagtacttgctctctctagcccagtctcttaataatgcacaggcccgcttcagagccctg
ggcaacctgggggacatctttgtctgcaagaaggacgtgactggggctatccaattctat
gagcagcagctggccctggctcaccaggtgaaggagcgcaggatggaggcgtgtgcctac
gcagccctgggtgccacctacagactggtgcagaagtacgacaaggctctgggctaccac
acccaggagctggaggtgtaccaggagctgggcgatgtgcctggggagtgtaaagcccac
ggccacctggcagccgtctacatggccctggggaagtacgccatggccttcaagagctac
gaggagcagctagagctgggccgcagactgaaggaccccggggtagaggcccaggtctat
ggcaacatgggcatcaccaagatgaatgtaggggtgatggaggaggctataggctacctg
gaacagcagctggccaccctccagcagctgagtggcaacgaggccgtgctggaccggggt
agggcctatggtaatctcggagactgttacgaggccctaggggactttgaagaggccatt
aaatactatgaccagtacctgtctgtggcccagagccttaaccggatgcaggaccaggag
aaggcctaccgaggcctggggaatggacacagggcgatgggtaacctgcagcagtccctg
gtgtgttttgagaagcgtctggtggtggcccatgagctgggggagtgtggagggaaggcc
caggcttacggggagctgggggcgctccacagccagttggggaactatgaacaggccatc
tcctgtctggagcgccagctaggcatcgcccgtgacacccaggaccgcccactagagggc
gacgccagctgtggcctgggcgtggtctaccaatccatgggagagtacgagacggccctg
cgctgccaccagagtgacctggagatcgcagaggagacgggcaggcccgcccgacagggc
cgtgcctatggcaacctgggcctcacctacgagtcgctaggcaactatgagcgtgcagtg
gtgttccaggagcagcatctgagtgttgcagctcagaccaatgacctggcggccaagacc
ctagcctacggcagtctggggaggacacaccacgcactgcagaactactcacaggctgtc
atgtacctgcaggaaggcctacgactggcagagcagctggctcggcgtgaggacgaggct
aagatccgccatcgtctggggctgtctctgtgggccagtgggaacctggaggaggcccag
caccagctctaccgagcatctgcattgtttgagaccattcgtcatgaggcccagcacagc
accgactacaaactttctctgtttgacctgcagacctcctcctaccaggcactccagagg
gtccttgtcagcctaggccaccatgacgaggcgttggcagtggcagagcggggtcggacg
cgggcctttgctgacctgctggtggagaggcagacaggccagcaggactcagacccctac
accccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctc
tacttctccatggctgctgggtacctgtacagctggctgctggctccaggagcaggcatc
ctgaagttccatgaggtgtacttgggagagggcgtgacagagggcggaccagacctccat
gagggcgggggagggggtgtggccagcggctcgtctctggagcagcatattgccagtgct
cgggaggccctgggagtagaatcctactacagcaggggttgttccagcagtgagacagag
agtgaggcaggggacctgttggaccagcagtttgaggagctcaacaacaaactcaactct
gtgactgaccccacaggcttcctccgcatggtgtccagaaacaacctgttcaacaggagc
tgccagagtatgactagcctgttcagtaacaccgtgtccccagccaaagatggctgctcc
tctctgccctgccgacccagcaacctcaacaaacctcctctccgtgccctctacgacctt
ctcatcgcacccatggaagggggcctgatgcattccagtggtcccgtgggtagacacaga
cagctgatattggtattggagggggagttgtacctcatccccttcgccctgctgaagggc
agctcctctaatgagtacctgtatgaacgcttcagcctcatcgccgtgccctccatccag
ggtctgggaatcagctccaagggtcattctcggcgggcggggccggcttcctgtggtggc
gtgtccatggcagctgtggtgggtaaccctcgtctgccgtcctctgtgatggaccgctgg
ctgtgggggcccatgccctcggccgaagaggaggctctcatggtgtctgagctgctgggc
tgccatccactggctggatcctctgccaccaaggagagggtgatgagtgccctcacccaa
gccgagtgtgcccacttcgctacccacatctcctggaagctggccgccctggtgctcaca
cccaacccagagagcatacccggcggggcaggggcaggtgtggggactggagggagaggg
gcagggggtgggaagagaggcagtggaggcaagggcaggaagggctcgtttgggagcagc
tacaccatcccagagagcctgcacctgcaggatgatgggagcgatgcggagagtatctgt
gacagccctcccctgcaggagttcctgctcaccgctgctgatatactggacctgaggctg
cctgtcaaactggtggtgctgggctcataccaggagtccagcagtaaggtgacagcagac
ggtgtggtaggtctgaccagggccttcctggctgctggggcccagtgtgtcctggtgtct
ctgtggcctgttcctgtgtcagcctccaaagtgtttgtccatgccttttacaccgctctg
ctcaacgggaccaaggccagcgctgccctcgcagacgccatgaagactgtccagagcagc
aagcagtactcccacccctccaactgggcaggctacatgctgattggtaatgatgtgaag
ctgaacagcccctcgtccctgattggccaggcactagcagagatcctacagtatccagag
agagcacgggatgctctgcgggtcttactgcaccttgtggagaagtctctccagaggatt
cagaacggccagcgtaactccatgtacacgtcccagcagagtgtggagaacaaggtgggg
ggcgtcccaggctggcatgccctgctgaccgctgtgggcttccgcctggactcggctggc
accggcatccctgctgctgtcttcttccctacagcagaccctggagacaggctgcagcag
tgtagcaccaccctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgt
aaactcatcaccgcctccgaggcaggagagcagctcatcaaccgggctgttaaaaatatg
gtgggaatgctccaccaggtgctggtccagcttcagacaggggagaaggagcaggacttc
tctctgctgcccatccaagtgtccatcagtgtgcagctctggagactgccaggctgccat
gaatttctggctgcactaggatttgacctgtgtgaggtgggtcaggaggaggtggtactg
aagacgggcaagcaagccaaccgccgcaccatgcactttgccctccagtccctgctggca
ctgtttgactccacagagctgccaaagcgtctcagcctggacagctcgtcctccctggag
tctctggcctcggcccagtttgtctccaaccccctaccactgggctaccccagcctgccc
ttctccccaccctgcctggacagtctggcctcagacgccatctccgtctacagcctgagc
tccgtggcctccaccatgagctttgcctccaaatcagagtgtgacttcctgggccatcga
cagcgtggtggggccacagcacacttctctgcccacaagcacctgcacattccccgcagt
cgctcctctcctcacggggcggctgcagcagcagcaggtgtgggccggggagatgatgag
gagtatgaaggcttttccatcatcagcagtgagcctctgggaagccactgtgactccctg
cctctacctccgggtcacgggcagcgccacctccaccgtgggggcaggggtgttgtcagt
agttccagctcgggcactgggcggggttaccaggtgtctgtgtcgtctcgaggcagtgtc
agcacccccacctccccggtcaagaccagcctggttcccagccccaaccctcccctccag
aaggtgccaggcaaggtgagcagctcagacacaggtgagtcggaccagtccagcactgag
acagatagcaccgtcaagtcccaggaggagaagactgtccctctggacccccaggagctg
gcccagaagattctggaggagacccagagccacctgcgggcggtggggagtttacaacgg
gctggggctgaggggactgcagctggagctacctcagccaggagctctgccttccgctcc
tcagagaccagcgccttcagccgtcccagcagcagcgccagtgtccgtgtccagtcctcc
ccacgacccaaacctccctcccgctcttcctccctgcagaagatcagctctggttacaac
agccctgcagcctcggagacctctctaaaggatggcagtcacccctcccctaccctggac
agccacgcccagttcaaactcaaataccccagctccccctatagtggtcacatctcccgc
tctcccagtaacgtgtcccccagctctggccaccagtccccggcttgcagtgccccatcc
ccagctctctcctactcctccacgggctctgcctgctccagccctgccgatgccccagac
ctggaccgcctcaggaggggcgtcatcgatgagaaggttgtggccatccacaacctgaag
acattctgggccaacacagcatcccagcaacagcagcagcatctgggtccagtccgggct
ctccgtagcgccccaggacccctggtctctgccaagagagatgtgctgagccttctgaac
ctctccccacgacactgctcccccagcgacgcccaagacagcctggagctgcgggagctg
gggctgcagtcgttggacaggggcaacaagaatccttccaatggacacaaccccagaaag
atggccccctcgccctctatttccactagcagcagccctggtcctcgctctatcagacta
cctgccggcaatggatacaagttcctctcccctggcaggtttttcccatcctccaaatgc
tga
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integrated database retrieval system
