KEGG   Oncorhynchus mykiss (rainbow trout): 110535235
Entry
110535235         CDS       T07259                                 
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03030  DNA replication
omy03410  Base excision repair
omy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110535235
   03410 Base excision repair
    110535235
   03450 Non-homologous end-joining
    110535235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:omy03032]
    110535235
   03400 DNA repair and recombination proteins [BR:omy03400]
    110535235
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110535235
DNA replication proteins [BR:omy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    110535235
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     110535235
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     110535235
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110535235
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 110535235
NCBI-ProteinID: XP_021475787
Ensembl: ENSOMYG00000004161
LinkDB
Position
11:complement(9264903..9270113)
AA seq 380 aa
MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTGVLLRHLTASEAKKLPIQEFLFSRLLQDINLTHEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGSIEEILENIDPSKHPAPEDWLYKEARGLFLQPDVVDCSTVDLKWSE
PNEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSLSSKRKEPETK
GSNKKKQKTGATSGKFKKGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcacgggcttgcaaagttgattgcagaccaggcaccatctgctataaaagaa
caagacatcaagaactactttgggcggaagatcgcaatagacgcctccatgtgtatgtat
cagttccttgtcgctgtcagacaggatggtaatgtgctacaaaacgaggatggagagacc
acaagccatctcatgggcatgttttaccggactatccgcatgctggagcacggcatcaag
cctgtctatgtgtttgatggcaagcccccacagctgaagtcaggagagctggagaagaga
ggagagaggagggctgaggctgagaaactgctggcccaggcacaggaagcaggggagcag
gagaacattgataagttcagtaaacgtctggtgaaagtcacccggcaacacaacgatgaa
tgcaagaagctgctcaccctgatgggggtgccatacatcgaggctccgtgtgaggctgag
gcgagctgcgctgctctggttaaggctgggaaggtgtttgccactgcaacagaggatatg
gacggtctgacttttggaacaggggtcctactaaggcacctcactgccagcgaagccaaa
aagcttcctatccaggagttcctgttcagtcgccttctgcaggacattaatctgacccat
gagcagttcatagacctgtgcatactgctgggctgtgactactgtggtactatcaaggga
atcgggcccaagagagccattgacttgatcagacaacacggctccatcgaggagattctg
gagaacatcgacccgtctaagcaccctgccccagaggactggctgtataaggaagccaga
gggctgttcctgcagcctgacgtggtggactgctccaccgtagacctcaagtggagcgag
cctaacgaggatgccctcatccagttcatgtgtgcagagaaacagttcagtgaggaccgc
atcaagaacggctgtaagaagattctgaagagccgacagggcagcacacagggacgactg
gacaccttcttcactatcaccgggtctctgtcatcaaaacgcaaggaacctgagacaaag
ggatccaacaagaagaaacagaagaccggtgcaacctcaggcaaatttaagaagggcaaa
tag

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