Oncorhynchus mykiss (rainbow trout): 110535315
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Entry
110535315 CDS
T07259
Symbol
irf9
Name
(RefSeq) interferon regulatory factor 9 isoform X1
KO
K04693
interferon regulatory factor 9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04217
Necroptosis
omy04620
Toll-like receptor signaling pathway
omy04621
NOD-like receptor signaling pathway
omy04625
C-type lectin receptor signaling pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110535315 (irf9)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110535315 (irf9)
04621 NOD-like receptor signaling pathway
110535315 (irf9)
04625 C-type lectin receptor signaling pathway
110535315 (irf9)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110535315 (irf9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110535315 (irf9)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
110535315 (irf9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
110535315
NCBI-ProteinID:
XP_021475909
Ensembl:
ENSOMYG00000033347
LinkDB
All DBs
Position
11:complement(14433512..14441499)
Genome browser
AA seq
430 aa
AA seq
DB search
MASGRIRSTRRLRSWMVDQVSSGKYPGLIWDDDAKTMFRIPWKHAGKQDFRSEEDGAIFK
AWAVFKGKLSDGGRVDPASWKTRLRCALNKSPEFKEVPERSQLDISEPYKVYCLVPMNEQ
VLGNVKIKGRARAGGRKRRSSDSDSEEEVKEEEVVVKRMKEEIITAPITMSVQEIDESVL
TIQQDQFDQPLVIMKSDGTVDELQVNVTIETVPPPGARDSFHVLVKYIGQEVLKREVIGS
DVRIAYLPSSPVPPTLMMGGFPRIPLPESPSTLTSNPGIGPQLQALSTLLPFMEKGVILT
STGAGIYAKRYCQGRVFWTGPHSTTTGPHKMNRAVEPVLLFDREAFKMELDHFRSYGGDP
PQCGITLCFGEEFSATEDPSSKLIITQITLPWAQQQVKEAEDFRESMTYLRDIASQSGDV
TINLVPVPYP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggagaattcgctcaacccgcagactacgctcctggatggtagaccaggtc
agcagtgggaagtaccctggcctgatatgggacgatgacgccaagaccatgtttcgtatc
ccctggaaacacgccgggaaacaggacttccgcagtgaagaggatggtgccatcttcaag
gcatgggcggtgtttaaggggaagttgtccgatgggggtcgtgtggaccctgcctcctgg
aagacccggctgcgctgtgctctcaataagagcccggagttcaaagaggtccccgagagg
tcccagctagacatctccgaaccatacaaagtttactgccttgtaccgatgaatgaacaa
gtgttggggaatgttaaaataaagggccgagccagagcaggagggaggaagagaaggagc
agcgattcagatagcgaggaggaggtgaaggaggaggaggttgtggtcaaacggatgaaa
gaggagatcatcaccgccccaatcaccatgtctgttcaggagattgatgaaagtgttctt
accatccaacaagaccagttcgatcagcccttggtcatcatgaagagcgatgggacggtc
gatgagctccaggtgaacgtcacgattgagaccgtccctccccctggagcacgggactcg
ttccatgtcttagtgaaatacataggacaggaggtgcttaaacgtgaggtcataggcagc
gatgtccgaatcgcctacctgccctcatcacctgttccacccaccctgatgatgggtggg
ttcccacgcatcccactcccagagtccccctccaccctgacctccaatcctggcatcggg
cctcagctccaggccctctccacactgttgcccttcatggagaaaggggtgatcttgacc
tccacgggggcagggatctatgctaagcgctactgccagggccgggtgttctggacaggg
ccacattcaaccacgacgggaccccacaagatgaaccgtgctgtggagcccgtgctgctc
tttgacagagaggctttcaaaatggagctggaccacttccgcagttacgggggagaccct
cctcagtgtggcatcaccttgtgtttcggagaggagttcagtgccacagaggacccatcc
agcaaactcatcatcacacagataaccctaccctgggctcagcagcaggtcaaagaagct
gaagacttccgggagtcaatgacctacctccgtgacatagccagccaatcgggagatgtc
accatcaacctggtaccagtgccttacccctga
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integrated database retrieval system
