Oncorhynchus mykiss (rainbow trout): 110535391
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Entry
110535391 CDS
T07259
Name
(RefSeq) uncharacterized protein LOC110535391 isoform X1
KO
K18763
la-related protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110535391
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110535391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
LED_rpt
RRM_fung
Motif
Other DBs
NCBI-GeneID:
110535391
NCBI-ProteinID:
XP_021476044
Ensembl:
ENSOMYG00000003890
LinkDB
All DBs
Position
11:16692465..16719098
Genome browser
AA seq
1926 aa
AA seq
DB search
MGCCCSKELSPGLLSERTRLLQASSPEALGIKHQDRLHTKALAQHVSDEMAQHTCVPDGP
AKRKLQEQEKKNNVIPDNVSTGPKARHSSVSGMRSGGLLTPQHSHEEELAIINASTGPSM
VTQTNTDTHTHMDSTEAGVPHTNAAKARTSCGNVPYLEGSVKSPLKQKIAEYTMDNSVRQ
RIQSTMENPPKQKMEKTMENLAKQIENTIQNPDRQRIENTVESPVRQRIAENALLRSTWF
NQTPEPGQEETEGWRTPLVGTSPTHQLYNIRAGGDSTRVGAEEDEEEDCVIRATLGRGFR
ARAQSFYSICSIDADDLDTDQSNTEEQTTFIQSHTAEPTAIQSHIAKTTSSIQSHVAEHT
ASIQSHIAEPTAFQSHLEEHTASIQSQAEKPKANDQSHRVESAKADLSHITEPKASEPMA
SDQSKTVEFTAIDQSQTLEPTAFDKSHGEPPEAPVLPDLLWRSYEDPQTSQQDSSITPGD
TRTPPLTGDITDPDILELTSRQEESVCVKDENVCVKKTGLLSTVKTVDSSQEGENTKRDL
NLHDTQNNIPTTTYPCPPNPTLTEEQLTHSPSLSSSPNSSPLLGAVDGATCVEEMERIEV
YQAVSVRMISEGLKGETEDEEEEEETILSSTVETTLTEVSPVSTLSSLSTVYPVYAVSLP
MDFTVHSFKSDLRPVDMEHKVGTKPDQYDITSDSNAKPDQNTTHVYAGRPDRDDVKPTGN
NRSPVDDSELTDWPVQAEDIVGRSAATEKEPETSVEQKHWQEMAAITSPPTRESSYPQNC
REDRESNNPSQGWEDRESSNLSQGCEYIESSHISQGCEDIESSHISQGCEDSESGHLSEK
RGGSTPVPQDLPSGDIHLQPCKGPPSSLSHFLSIGSEWRDGRLSSEGGTEPTDCRNLSEK
NTGDGTHTEDRTHAEDGTHAEDGTHAEDGTHAEDGTHTEDRTHAEDRTHAEDGTHAEDGT
HAEDGTHTEDGTHAEDRTHAEDGTHAEDGTHAEDKTHAEDRTHAEDGTHAEDGTHAEDGT
HAEDETHAEDGTHAEDRTHAEDRTHAEDGTHAEDGTHAEDRTHAEDGTHADKRAEIHTEN
RISLLEECVATNSLSSVCSVRTQSDSSLGTLPEDTECSNIATNDSVFVTPVFPPVTFEFS
PFDEPLKFVSHGDDCSDVNYPVDDATTADSYLLVGVLGVEPDQIDVYASTPSYQIQFLGQ
GSLAVTTDMDTMGVRGQVEEGGMIDMVSELLGEEGDPTLSGLYPSPWTHLGPGLVEEEVC
GGWAQGLAQGMVPSQGEGEEGCEEEQPSSSMALLGVYPTYSTLLPQDSCLWEWHHQYQPK
STLVSELNPNAQVWANHMLSLDHSGPIYTDSRLPWLAVNQEGYDQGYDLEEVGEAQLEPS
VVEFTTVTMGNLSTNGLVQDSCISEELIDQLKTSLESCLLRENLANDLYLVSQMDSDQFV
PITTLANLDHIKKLSTDLELISDVLKSLPLVEVAECGQKVRPNQGRCIVILREVPETTPP
EDVKALFACESLPRIQSCEFAQNDNWFITFKTEADAQQAFQYLREEVRTFQGKPIKARIK
ANVMAVTSYAPKNGYRPRAMDSCTNQQPYNPYYTPPTFQQPLPQLYPMTNQSLDAMAGYT
DPDLVRWTHTYRCRYKRFLSHWCHWCCVQQMASLSGFMNGFPGGPSFKISPSYRHSRGHR
GQRDQRRRSGDREPGLLDDPPFFPEHVPIGRPPGPHRQGPPRLPGNRRMEGEGGRRGGRR
ESGSSPRTGIGRRGPIGQRRRRDEKYTREPPKSPPRSLSPSLELGPTSFPPLPPATASRE
TLTIATCNHKCAVTYSSTSQPTTVTLQDLQPITALPQKNLPPEKLKETMSSLKRTTAAPP
TVKEPIQTTKENRLAVESKKPSYAEICQRIRANQTLCANPIDHTPSGAELAPAYPAQESD
QAQLPR
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atggggtgctgctgcagtaaggaactgagcccaggcctgctaagtgagaggaccaggctg
cttcaggcatcaagcccagaggcgctggggatcaaacaccaggacagactacacactaaa
gctttggctcaacatgtgtctgacgaaatggctcaacacacatgtgtaccggacggaccg
gccaaacggaaacttcaggaacaggagaagaagaacaatgtcatcccggacaacgtgtcg
acaggccccaaggcgaggcatagcagtgtcagtggcatgcggagtggggggctactcact
ccgcaacactcacacgaggaggaactggctattattaacgcctccacaggccccagcatg
gtcacacagacaaacacggacacacacacacacatggactcgacggaggcaggcgtgcca
cacacaaatgctgccaaggccaggaccagctgtgggaatgttccatatttggaggggagt
gtgaagagcccattaaaacaaaagatagcagagtacactatggataattccgttagacaa
aggatacagagcaccatggagaacccacccaaacagaagatggagaagacaatggagaac
ctagcgaaacagatagagaataccattcagaacccagacagacagaggatagagaacact
gtggagagcccagtgagacagaggatagcggaaaacgccctgctcaggtctacttggttc
aaccagaccccggagcccggccaggaagagacagagggctggaggacccccctggtcgga
acatccccaacccaccagctgtataatatcagagctgggggggattccactagagtagga
gcagaggaagatgaggaggaagactgtgtcatcagggcaaccctggggcggggtttcagg
gccagagctcagagcttctacagcatctgttccatcgatgctgacgacctcgacactgac
caatccaacacagaggaacagacaaccttcatccaatcacacacagcggaacctacagca
atccaatcacacatagccaaaactacatcctctattcaatcacacgtagccgaacataca
gcttctatccagtcacacatagccgaacctacagctttccaatcacatttagaggaacat
acagcctctatccaatcacaagcagaaaaacctaaagccaatgaccaatcacacagagtg
gaatctgcaaaggctgacctatcgcacataacggaacccaaggcttctgaacccatggct
tctgaccaatcaaaaacagttgaatttacagccatcgaccaatcacaaacattggaacca
acagcctttgacaaatcccacggtgagccccccgaggcacctgttctgccggaccttctc
tggagaagctatgaggaccctcagacttcacaacaggacagctccatcacccccggagac
accaggaccccaccactaactggagacattacagatcccgacatacttgagctgacgtca
cgccaggaggagagtgtgtgtgtgaaggacgagaatgtgtgtgttaagaagacaggtctt
ttgtccacagtgaagactgttgatagcagccaggaaggagaaaacacaaagagggatttg
aaccttcatgatactcaaaacaatattcccaccaccacatacccctgccctcctaaccct
acccttacagaggagcagctcacacacagccccagccttagctctagccccaactccagc
cccctgcttggggcagtggatggggccacatgtgtagaggagatggagaggattgaggta
taccaagctgtctcagtgaggatgatcagtgaggggctgaaaggagagacagaggatgag
gaggaggaggaggagaccatactcagcagcacagtggaaaccacactaacagaggtatca
ccagtctccacactctcttcactatccacagtctatccagtctacgcagtgtctctaccc
atggactttactgtccactcattcaaatctgaccttagaccagtggatatggaacataaa
gttggaacaaaacctgatcagtatgatattacttctgacagcaacgccaagcctgatcaa
aacacaacacatgtgtatgctgggagacctgatagggatgatgtaaaacctactggaaat
aacagaagccctgttgatgactcagaactcactgattggccagtccaggctgaggatata
gtgggaaggtctgcagcaacagagaaggagccggaaaccagtgtggaacagaaacactgg
caggaaatggctgccatcaccagtccccccacaagagagagcagctatcctcagaattgt
agagaggacagagagagcaacaatccttctcagggttgggaggacagagagagcagcaat
ctttctcagggttgtgagtacatagagagcagccatatttcgcagggttgtgaggacata
gagagcagccatatttctcagggttgtgaggacagcgagagcggccatctctctgagaaa
agaggaggctctactcctgtccctcaggacctgcctagtggggacattcacttacagccc
tgcaaaggtcctccatcctccttgtcccatttcctttcaataggttcagaatggagagat
gggaggttgagttcagagggaggaactgaacccactgactgcagaaacctgtctgagaag
aacacaggagacggaacacacacggaggacagaacacacgcggaggacggaacgcacgcg
gaggacggaacgcatgcggaggacggaacacacgcggaggacggaacacacacggaggac
agaacacacgcggaagacagaacacacgcggaggacggaacacacgcggaggacggaacg
cacgcggaggacggaacgcacacggaggacggaacgcacgcggaggacagaacacacgcg
gaggacggaacacacgcggaggacggaacgcacgcggaggacaaaacacatgcggaggac
agaacacacgcggaggacggaacgcacgcggaggacggaacgcacgcggaggacggaaca
cacgcggaggacgaaacacacgcggaggacggaacacacgcggaggacagaacacacgcg
gaggacagaacacacgcggaggacggaacacacgcggaggacggaacacacgcggaggac
agaacacacgcggaggacggaacacacgcggacaaaagggcagagatacacactgagaat
agaatatccctcctagaggaatgtgttgcaacaaacagcctcagtagcgtttgtagtgta
agaacacagtctgacagtagtttagggacactccctgaggacactgagtgtagtaatata
gcaacaaatgacagtgtgtttgtcacccctgttttcccacctgtgacatttgaattcagc
ccatttgatgaacccctgaagtttgtttcccacggcgatgactgctcagatgtgaactac
cctgtagacgatgcaacgacggcagattcctatttgttggtgggagtgctgggggtggag
cctgatcagattgacgtttacgcctcgaccccctcttaccagatacagttcctgggtcag
gggtcactggctgtcaccacggacatggacaccatgggggtgagaggacaggtcgaggaa
gggggcatgatagacatggtgtcagaactgctgggagaggaaggggaccccaccctctct
ggcctctatccctctccctggacgcatttagggccagggctggtagaggaagaggtatgt
ggaggatgggcccaggggctagcccagggtatggtccccagccagggtgagggtgaggag
ggctgcgaggaggagcagccctctagctccatggccctgctgggagtctaccccacctac
agcactcttctgcctcaggactcttgtctctgggaatggcaccatcagtaccagcctaaa
tccaccctggtctctgagctcaaccccaacgctcaggtatgggccaatcacatgcttagt
ctggaccactcaggccccatctacactgactcccgtctaccatggctagccgttaaccag
gaagggtatgaccagggatatgacctggaggaagtgggcgaggctcagctggaaccgagc
gtcgtagaattcacaacggtcactatgggaaacctgtcaaccaatggcctggtccaggac
agctgtatatcagaggagctcatcgatcaactgaagacctcactggagtcctgtctttta
cgggagaaccttgccaacgacctctacctcgtctcccagatggacagcgaccagtttgtt
cccataacaacgctagccaacctcgaccacatcaagaagctcagcacggacttggaactc
atctctgacgtcctcaagtccttgccgctggtggaggtggcagaatgtgggcaaaaggta
cggcccaatcagggacgctgtatcgtcatcctccgagaggtcccggagaccacaccccca
gaggacgtaaaggctctgtttgcgtgtgagagcctccccaggatccagagctgtgagttt
gcccagaacgacaactggttcatcacctttaaaactgaggctgacgctcaacaggcattt
cagtacctgagagaggaggtgaggacattccagggaaaacccatcaaggcacggatcaag
gccaatgtgatggcagtcacatcttacgctccaaagaatggctacaggccccgcgcaatg
gactcctgcacaaatcagcagccttacaacccatactacacccctcccactttccagcag
cccctcccacagctttacccaatgaccaatcaaagcttggatgccatggccggatacacg
gaccctgacctggtgagatggacacacacatacagatgcaggtacaagcgttttctctca
cactggtgtcattggtgttgtgtacagcagatggcgtcattatctggcttcatgaacggc
ttcccaggaggccccagcttcaaaatatccccctcatacagacacagtagggggcaccgt
gggcagcgggaccagaggcggcggtctggcgacagggagccgggccttctggatgacccc
cccttcttcccagagcatgtaccaataggacgcccccctggcccccacaggcagggcccg
ccacggttaccaggcaacaggcgtatggagggagaagggggtcgacgtggagggagaagg
gagtcagggtcctccccaagaactggcataggaaggagaggccccattggtcagaggagg
agaagagatgagaagtacactagagagccccccaagtcgcccccccgctccttgtctccc
agtctggagcttggccctactagcttccccccgctgcccccagcaacagcctccagagaa
acacttaccatagcaacctgcaaccacaagtgtgcagttacatacagcagtaccagccaa
ccaaccactgtgacattacaagacctccagcctatcacagcattgcctcagaaaaacctc
cccccagagaagctgaaggaaaccatgtcatctctcaagaggaccacagcagctcctccg
accgtgaaagaacctatccagaccacgaaggaaaacagactagcagtggagtccaagaag
ccaagctacgctgagatctgccaaaggatacgagccaatcaaacgctttgcgcaaacccc
attgaccacaccccatccggggcggagcttgccccagcctatcctgcacaggagtctgac
caggctcagttaccacggtga
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