KEGG   Oncorhynchus mykiss (rainbow trout): 110535412
Entry
110535412         CDS       T07259                                 
Symbol
cul1b
Name
(RefSeq) cullin-1b
  KO
K03347  cullin 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04110  Cell cycle
omy04114  Oocyte meiosis
omy04120  Ubiquitin mediated proteolysis
omy04141  Protein processing in endoplasmic reticulum
omy04310  Wnt signaling pathway
omy04340  Hedgehog signaling pathway
omy04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110535412 (cul1b)
   04120 Ubiquitin mediated proteolysis
    110535412 (cul1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    110535412 (cul1b)
   04340 Hedgehog signaling pathway
    110535412 (cul1b)
   04350 TGF-beta signaling pathway
    110535412 (cul1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    110535412 (cul1b)
   04114 Oocyte meiosis
    110535412 (cul1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110535412 (cul1b)
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     110535412 (cul1b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 IntS11_C
Other DBs
NCBI-GeneID: 110535412
NCBI-ProteinID: XP_036790981
Ensembl: ENSOMYG00000008809
LinkDB
Position
11:complement(17369617..17386306)
AA seq 776 aa
MSSNRGQNPHGLKQIGLDQIWDDLRAGIHQVYTRQSMAKSRYMELYTHVYNYCTSVHQSS
QGRGSAVPNKPSKKSSTPGGAQFVGLELYKRLKEFLKNYLTSLLMDGEDLMDECVLKFYT
QQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQVT
NAVLKLIEKERNGETINTRLISGVVQSYVELGLNEEDAFAKGPTLSVYKEYFECQFLTDT
ERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARRCEQVLIEKHL
EIFHTEFQNLLDADKNQDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAAL
NDPKVYVQTTLNVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNTVTKMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVL
SSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYT
LQASTFQMAILLQYNTEDLYSVQQLTDSTQIKTDILVQVLQILLKSKLLVLEDENANIDE
VEFKPETLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMK
MRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgtcgtccaacaggggccagaacccacatgggttgaagcagatcgggctggaccagatc
tgggatgacctgagggctggcatccaccaggtgtacacacggcagagcatggcaaagtca
cgctacatggagctctacacccatgtgtataactactgtaccagcgtgcaccagtccagt
caaggccggggatctgccgtccccaacaagccctccaagaagagcagtactcctgggggg
gcccagttcgtaggcctggaactctacaagagactcaaggagttcctcaagaactacctg
accagtctgctcatggatggtgaggacctgatggatgagtgtgtgttgaagttctacaca
cagcagtgggaggactaccggttctccagtaaggtgctgaatgggatctgtgcttacctc
aacaggcactgggtcagacgtgaatgtgacgagggacgcaagggcatctacgagatctac
tcgttggcgttggtaacgtggagggagtgtctattcagacccctaaacaaacaggtaacg
aatgcggtcctgaagctgatcgagaaggagaggaatggggagaccatcaacaccagactc
atcagtggtgtggtgcagtcctacgtggagctggggctgaatgaggaggatgcgtttgct
aagggtcctacgctgtcagtgtataaagaatactttgagtgccagttcctcacggacacc
gaacgcttctacacacgagagagcaccgagttcctccaacagaaccctgttaccgagtac
atgaagaaggccgaggcccgtctgctagaggaacagaggcgtgtacaggtgtacctccat
gagtccactcaggatgagctggccaggcggtgtgaacaggtgctcatagagaaacacctg
gagatcttccacacagagttccagaatctactggatgctgacaagaaccaagatctaggt
cggatgtataacttggtgtctcgtataacggatggcctaggagagctaaagaaactccta
gaaacacacatccacaaccagggcctggccgctatagagaaatgtggagaggccgctctc
aacgaccctaaggtgtatgtccagaccacactgaacgtccataagaagtacaacgctctg
gtcatgtctgccttcaacaatgacgctggcttcgtagctgctctagacaaggcgtgtggt
cgtttcatcaacaacaacacggtcactaagatggcccagtcctccagcaaatcacctgaa
ctactggctagatactgtgactctctgctcaagaagagttctaagaacccagaagaggca
gagttggaggacacactcaaccaagtgatggtggtgtttaagtatatagaggacaaggat
gtgttccagaagttctatgctaagatgctggctaaacgcctcgtccaccagaacagtgct
agcgacgacgcagaggctagcatgatctccaaactcaagcaagcgtgtggctttgagtac
acatctaaactacagaggatgttccaggacatcggagtcagcaaagacctcaacgaacag
ttcaagaaacacctgaccaactctgaacctctcgacttggacttcagtatccaagtgttg
agttccgggtcctggccgttccagcaatcatgcaccttcgctctgccctccgagttggaa
cgtagctaccagcggttcacagcattctacggcagcagacacagcggtcggaaactcacc
tggctctaccacctatctaaaggagagctggtcaccaactgctttaaaaacaggtacact
ctgcaggcctctaccttccagatggctatcctgctgcagtacaacacagaggacctgtac
tccgtacaacaactcactgacagcacacagatcaaaaccgacattctggttcaagtgttg
cagatcttgttgaaatccaaattgctggtcctggaggatgagaatgctaacatagacgaa
gtggagttcaaaccagaaaccctgatcaaactcttcctgggatacaagaataagaagctg
cgtgtgaacattaacgttcctatgaagactgaacagaaacaggagcaggagaccacacac
aagaacatagaggaggaccgcaagctcctcatacaggctgccatagtgaggataatgaag
atgaggaaggttctgaaacaccagcagctcctggctgaagtcctaaaccagctctcgtcc
cgcttcaaacccagagtccctgtcattaagaagtgtatagacatcctgatagagaaggag
tatctggagagagtggatggagagaaagacacgtacagctacctggcttaa

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