Oncorhynchus mykiss (rainbow trout): 110535429
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Entry
110535429 CDS
T07259
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110535429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110535429
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110535429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
FapA
XAC0095_dom
Nup49_C
MSC_0620_UU052
PSY3
His-Xaa-Ser_sys
Tox-ODYAM1
JAKMIP_CC3
PBC
Motif
Other DBs
NCBI-GeneID:
110535429
NCBI-ProteinID:
XP_021476090
Ensembl:
ENSOMYG00000017596
UniProt:
A0A8C7QLX4
LinkDB
All DBs
Position
11:18790170..18802871
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AA seq
594 aa
AA seq
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MSGFNFGSGSIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGALGATAPASTTTTSSLGLG
GSLFSQKPTGGFSFNTPASGAPAASTAPTTGFSMTFNKPSASAQPFSLTAASSAPTGAGL
TLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTGLSQSTLGGLGF
ALGLGQTTLGSGGLTLGSLASTSTAVSAAPSLGLGGVDFSTSSEKKSDKSSGASPQDSKA
LKDENLPPVICQDVDNFQKFVKEQKQVHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGL
QRNALAIDKLKMETAQELKNADIALRTQKTPPGLQHDNTAPYDYFRCLVEQFEVQLQQYR
QQIEELENHLTTQGSGSHITPQDLSLAMQKLYQTFVALAAQLQSVHENVKTLKQQYLGYR
RAFLEDSTDVFESKRVASKKWQSAPRITTGPAPFSSIPNAAAVAMAATLSQQQQPGPGSQ
VSLGSGLGNPFALGVGSSLGTSGLGVFGGGPGFGGVATGGSSFGFSSASKPSGGSLSAGF
GSNSSSGFNFSSPGLNASAGLTFGVSNPPATGFGTGGPLLQLKKPPVGNKRGKR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcggatccgggtctattggttccaccaacgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggagctctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggc
gggtcactattctcacaaaaacctactggggggttctcctttaacactcctgcctcaggt
gcccctgcagcctctacagcccctaccacgggcttcagtatgaccttcaataaaccctct
gcctcggcccaacccttctccctcactgcagcctcctcagcccccacaggggcaggactg
acactaggctcagtcctcacctccactgcgccacagcaaggagccacaggattctctctc
aacctagggggtgtggccgcaagtacagccccatccacaggtctatcgctgggttccagt
atgttctctaacatggctactactggtctgagtcagtccactcttggaggactggggttt
gcgttaggtttgggccagaccactctcggatcaggggggttgacgttaggttccctggcc
tctacctccacggcggtgtcagcggcccccagccttggactgggaggagttgacttcagc
acctcctcagagaagaaaagcgacaaatcatcaggggccagcccacaagacagtaaagct
ttgaaagatgaaaatttgcctccagtcatctgtcaggatgtagacaacttccagaagttt
gtgaaggagcagaagcaggttcacgaggagatcagcaggatgtcatctaaagccatgctg
aaggttcaggacgacatcaagagtctcaaacagctgctgtctgtcagtgcttcgggacta
cagagaaacgccctggctatagacaaactgaagatggagactgcgcaggagttgaagaat
gcagacatagctctgcggactcagaagactccccctggactccagcatgacaacacagct
ccctatgattatttccggtgtttagtggaacagtttgaggttcagttgcagcagtacaga
cagcagatagaggaactggagaatcaccttactacacagggcagtggatcacacatcaca
ccacaggatctgtcactggccatgcagaagttgtaccagacgtttgtggctctggctgct
cagctccagtcagtacacgagaacgtcaagaccctgaagcagcagtacctgggataccgc
cgggccttcctggaggactccacggacgtcttcgagtccaagcgggtggccagtaagaag
tggcagagtgccccacgcatcaccactggccccgcccccttcagcagcatccccaatgcg
gcggcggtcgccatggcagccacgctgagccagcagcagcagcccggcccagggagccag
gtgtccctggggtctggcttgggaaacccctttgccttgggagtgggctctagcttgggc
acctcaggtctcggagtgtttggtgggggtccaggtttcgggggggtagcgacggggggc
tcctcatttggtttctcctctgccagcaagccctcgggagggagcctgagtgcaggtttt
ggaagcaacagtagttcagggtttaacttcagtagccccggcctcaacgcgtctgcaggc
ctgacgtttggcgtgtccaaccctcccgccacgggcttcggcactggaggtccactgctg
cagctcaagaagcccccggtgggaaacaagaggggcaagagatag
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