KEGG   Oncorhynchus mykiss (rainbow trout): 110535429
Entry
110535429         CDS       T07259                                 
Name
(RefSeq) nucleoporin p58/p45 isoform X1
  KO
K14307  nucleoporin p58/p45
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110535429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110535429
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110535429
SSDB
Motif
Pfam: Nucleoporin_FG2 NUP58_M FapA XAC0095_dom Nup49_C MSC_0620_UU052 PSY3 His-Xaa-Ser_sys Tox-ODYAM1 JAKMIP_CC3 PBC
Other DBs
NCBI-GeneID: 110535429
NCBI-ProteinID: XP_021476090
Ensembl: ENSOMYG00000017596
UniProt: A0A8C7QLX4
LinkDB
Position
11:18790170..18802871
AA seq 594 aa
MSGFNFGSGSIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGALGATAPASTTTTSSLGLG
GSLFSQKPTGGFSFNTPASGAPAASTAPTTGFSMTFNKPSASAQPFSLTAASSAPTGAGL
TLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTGLSQSTLGGLGF
ALGLGQTTLGSGGLTLGSLASTSTAVSAAPSLGLGGVDFSTSSEKKSDKSSGASPQDSKA
LKDENLPPVICQDVDNFQKFVKEQKQVHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGL
QRNALAIDKLKMETAQELKNADIALRTQKTPPGLQHDNTAPYDYFRCLVEQFEVQLQQYR
QQIEELENHLTTQGSGSHITPQDLSLAMQKLYQTFVALAAQLQSVHENVKTLKQQYLGYR
RAFLEDSTDVFESKRVASKKWQSAPRITTGPAPFSSIPNAAAVAMAATLSQQQQPGPGSQ
VSLGSGLGNPFALGVGSSLGTSGLGVFGGGPGFGGVATGGSSFGFSSASKPSGGSLSAGF
GSNSSSGFNFSSPGLNASAGLTFGVSNPPATGFGTGGPLLQLKKPPVGNKRGKR
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgtcaggctttaatttcggatccgggtctattggttccaccaacgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggagctctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggc
gggtcactattctcacaaaaacctactggggggttctcctttaacactcctgcctcaggt
gcccctgcagcctctacagcccctaccacgggcttcagtatgaccttcaataaaccctct
gcctcggcccaacccttctccctcactgcagcctcctcagcccccacaggggcaggactg
acactaggctcagtcctcacctccactgcgccacagcaaggagccacaggattctctctc
aacctagggggtgtggccgcaagtacagccccatccacaggtctatcgctgggttccagt
atgttctctaacatggctactactggtctgagtcagtccactcttggaggactggggttt
gcgttaggtttgggccagaccactctcggatcaggggggttgacgttaggttccctggcc
tctacctccacggcggtgtcagcggcccccagccttggactgggaggagttgacttcagc
acctcctcagagaagaaaagcgacaaatcatcaggggccagcccacaagacagtaaagct
ttgaaagatgaaaatttgcctccagtcatctgtcaggatgtagacaacttccagaagttt
gtgaaggagcagaagcaggttcacgaggagatcagcaggatgtcatctaaagccatgctg
aaggttcaggacgacatcaagagtctcaaacagctgctgtctgtcagtgcttcgggacta
cagagaaacgccctggctatagacaaactgaagatggagactgcgcaggagttgaagaat
gcagacatagctctgcggactcagaagactccccctggactccagcatgacaacacagct
ccctatgattatttccggtgtttagtggaacagtttgaggttcagttgcagcagtacaga
cagcagatagaggaactggagaatcaccttactacacagggcagtggatcacacatcaca
ccacaggatctgtcactggccatgcagaagttgtaccagacgtttgtggctctggctgct
cagctccagtcagtacacgagaacgtcaagaccctgaagcagcagtacctgggataccgc
cgggccttcctggaggactccacggacgtcttcgagtccaagcgggtggccagtaagaag
tggcagagtgccccacgcatcaccactggccccgcccccttcagcagcatccccaatgcg
gcggcggtcgccatggcagccacgctgagccagcagcagcagcccggcccagggagccag
gtgtccctggggtctggcttgggaaacccctttgccttgggagtgggctctagcttgggc
acctcaggtctcggagtgtttggtgggggtccaggtttcgggggggtagcgacggggggc
tcctcatttggtttctcctctgccagcaagccctcgggagggagcctgagtgcaggtttt
ggaagcaacagtagttcagggtttaacttcagtagccccggcctcaacgcgtctgcaggc
ctgacgtttggcgtgtccaaccctcccgccacgggcttcggcactggaggtccactgctg
cagctcaagaagcccccggtgggaaacaagaggggcaagagatag

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