KEGG   Oncorhynchus mykiss (rainbow trout): 110535431
Entry
110535431         CDS       T07259                                 
Name
(RefSeq) toll-like receptor 13 isoform X2
  KO
K18808  toll-like receptor 13
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:omy04054]
    110535431
Pattern recognition receptors [BR:omy04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   110535431
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 TIR TIR_2 LRR_9 LRR_6 LRRNT LRR_LRWD1 LRR_NXF1-5
Other DBs
NCBI-GeneID: 110535431
NCBI-ProteinID: XP_021476097
Ensembl: ENSOMYG00000018314
LinkDB
Position
11:complement(18717377..18722867)
AA seq 963 aa
MELKVTLSGKGNGSTYSRLSFFLCILLYFWVLFNPVNGYSMKHCRIRESLNTSVLCDGRN
LNAVPADIPLLVRSVNIAKNNISQIKREDFKDLTILKMLIMYSNRISHVENGSFSDLVAL
EQLNLAFNKLTSLSDQMFKGLDNLTVLQLENNHISSIASSSFQLLFSLKVLNLTSNKLHC
FKELKHILQLPSLLKLFIGNNSLNSLQSQEISNRSIGLTELDLSRNPLEIFSVTADIFPY
LKKLDLSFCGINGSMEWDVADRYFLSNVSSLDLSGIHMSLQGIGSVLQSINFSLASLGLD
KIGKDNLINVACHIPTLKTLRLQCNNFSSVSDKMLQSCTQVTDLDISGNNITDLSEAAFR
SIKDLKTLRLGYDGLSSVPNATRNLRTLKKLDLSHNIIKTLGCSDFSNLRRLEKLYLNNN
LISKLEGCVFLDLRALNSLTLRRNRILNVGDAFTKGLQHLKSLDLGFNKLTNIRTKDFKS
LRSLEDLALYDNEIKTLDDGAFVGLAKLKNLVLLNNVIGKSEIRGAVFKGLRSLKTLNMA
SNAIKYEKDEQLLQPPFTDLSSLENLYIFSQHYSKYMRQSCLPSNFLEGLNMLSEFQAGN
LHIATLHPDTFIHTPQLLSLDISQNFFHALSPELFHPIPKLKRLTISKTELESLDFLIEA
NLTQVRFLKVRQNKIKWTNETVLHSLPALTLLDMQRNPFICDCRNAWFVHWAESNNQTQV
AYAHDYPCSYPDDLKNTKLLDLDTHSCSVDLGIFYFISTTSLVLLTLLGSFIYHLLRWQV
VYAYYLFLAYLHDSKRRNRQTPHQYDAFVSYNTHDECWVVRELLPELEGEQGWKLCLHHR
DFQPGKPIIENITDAIYRSRKTICVITHRYLQSEWCSREIQVASFRLFDEQKDVLILVFL
EEIPDHQLSPYHRMRRLVKRRTYLSWPRVGEDTRVFWQKLQVALETRDWPAEENPILTGV
ERQ
NT seq 2892 nt   +upstreamnt  +downstreamnt
atggaactgaaagtaaccttgtcaggaaaaggaaatgggtctacatattctcggttgagt
ttctttctatgcattcttctgtatttctgggttctatttaatccagtaaatggctactca
atgaaacactgcagaattagggaatctctaaacacgtctgtgctatgtgacggcaggaac
ctcaatgccgtaccagcagacatcccattattggtgagatctgtaaacatagcaaagaat
aacatttcacagataaaaagggaggacttcaaagatctaacaatcctcaaaatgttaatc
atgtacagcaacaggatttctcatgttgagaatgggtctttttcagacctggtggctcta
gagcagctgaatctggcctttaacaaactcacatccctctcagaccaaatgtttaagggc
ctggacaacctcacagtactacaattggagaacaaccacatctcaagtattgcctcctca
tcttttcagttactcttcagcttgaaggtactgaacttaaccagcaacaaactacattgt
ttcaaggagctgaagcacattttacaattgccaagcttgctgaagttgttcattgggaac
aacagcttgaactctttgcagtcacaggaaatatcaaataggtcaatagggctgacagag
ctggatctatccaggaatcctctggagatcttcagtgtcacagcagatatttttccctat
cttaagaaactagacctctccttctgtggcattaatggaagcatggaatgggatgtagcg
gacaggtattttctgagtaatgtgagcagcctcgacttgagtggcattcacatgtcttta
caggggattggttcggtgctccagagcatcaacttttcgttggcatctctggggctggat
aaaataggaaaagataacctcattaatgtagcctgccacatacctacactgaagaccctc
cgattgcaatgtaacaacttcagcagtgtctctgacaagatgctgcagtcctgcacacag
gtgactgacctggacatatcaggtaataatattactgacctgtcagaagctgcttttcga
tcaataaaagatcttaaaactctgagactaggctatgatggcctctcttctgtgccgaat
gctacaaggaatctccgcacattaaaaaaattggatctcagccacaacatcatcaaaact
ttaggctgctcggatttctccaatctaagaagacttgaaaaactctatcttaacaacaat
ttaatctcaaaacttgaagggtgtgttttcctggatttaagggccttaaatagcctgaca
cttagaaggaacagaatcctaaacgtgggcgacgctttcacaaagggtttgcaacattta
aagagcttggatttaggattcaataaactaaccaacatcagaacaaaggacttcaaaagc
ttaagatcacttgaggatttggctttatatgacaatgaaataaagacactggatgatggg
gcctttgtgggtttggccaaacttaaaaatcttgtcctgctaaacaatgttataggtaaa
agtgaaatccggggtgctgtgttcaaaggacttagaagcttaaaaactctcaatatggct
tccaatgctatcaaatatgaaaaagatgaacaactactacaaccacccttcactgacctg
tcatctctggaaaacctctacatatttagtcagcattatagtaagtatatgagacagtct
tgtctaccttccaactttcttgaaggtctgaacatgttatcagagttccaagcagggaat
cttcatattgcgaccctgcaccctgacacattcattcacacaccccagttgttgtccctt
gatatcagccagaatttcttccatgccctctccccagagctctttcacccaatccccaag
cttaaaagactcaccatctccaaaactgaacttgagtcattagatttccttatagaagcc
aatctcactcaagtacgtttcttaaaggtgagacagaataaaattaaatggaccaatgag
acagtgctgcactctctcccagccttaactctcctggatatgcaaaggaatcctttcatt
tgtgactgcagaaatgcttggtttgttcattgggctgagagcaacaaccaaacacaagtt
gcttatgcccatgactatccatgtagctatccagacgatctcaagaacactaaactgttg
gacctggacacccactcctgttcagtggacctaggcatcttctacttcatctcaaccact
tctctggtcctcctcaccctgctggggtcctttatctatcatctcctgaggtggcaggtg
gtatatgcctactacctcttcctggcttatctccatgactccaagcggaggaacagacaa
actcctcatcagtacgatgccttcgtttcctacaacacccatgatgaatgctgggtcgtg
agggagctgctgccagagttggagggagagcagggctggaagttgtgtcttcaccaccgg
gacttccagccaggtaaacccatcatagagaacatcacagacgccatctacaggagcagg
aaaaccatctgtgtgatcacccaccgatatctgcagagtgagtggtgctccagagagatc
caggtggccagcttccgtctttttgatgagcagaaggacgtgctgatcctggtgtttctc
gaagagatcccagaccaccagctctcaccctaccaccgcatgagaaggctggtgaagaga
cgcacctacctgagctggccaagagttggggaggacacaagggtcttctggcagaaactc
caggtggctttggagaccagggactggcctgctgaggagaaccccatcctcaccggggtg
gagaggcagtga

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