Oncorhynchus mykiss (rainbow trout): 110535443
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Entry
110535443 CDS
T07259
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110535443 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omy03032
]
110535443 (pola1)
Enzymes [BR:
omy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110535443 (pola1)
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
110535443 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
110535443
NCBI-ProteinID:
XP_021476111
Ensembl:
ENSOMYG00000019829
UniProt:
A0A8C7RG48
LinkDB
All DBs
Position
11:19466942..19561386
Genome browser
AA seq
1466 aa
AA seq
DB search
MSPVSKPEKDVDNPDGENDCGLAVGRSRREKKEKTGRKSALEQLKRAKKGEKVKYEVEDL
TSVYEEVDEEQYSRMVRERQDDDWIIDDDGTGYVEDGREIFDEDLADDVLEKGAKGKAGA
KGADSKNNIKKAAVAKPNSIKNLFMNSNVKKPAEKDVDLSKDDLLGDILQDLHSDRPSPL
TPPVVTLKKKKALGTTMNPFSIKTQSPKESPSAQGSKVKHPPPGELTPRVPSRLPTSRPS
VPVEKKRVKVQEIEEEDNSLQFDGVDFDEPMEVGLEQEKEGPANEEEEPETKPAVKVEPK
AEPQDLVLLSGKLGGTWGQEEGDSEAPVEVQVDPSRLPLAEGPEGELMFRFYWLDAFEDQ
YSQPGVVYLFGKVWIESAKAHVSCCVSVKNIERTMHFLPREHKVNPKTGEETDTPVGMMD
VYQEVNDLSEKFKIMKFKSKKVEKSYAFEIADVPTESEYLEVRYSAEYPSLPSDLKGATF
SKVFGTNTSSLEHFLLSRKIKGPCWLDIKTPQLSSVPVSWCKVEAVAMRSDLVTVVKDLP
PPPLTVMSISLKTVQNPKTHHNEIVSLAALVHHRFHLDKAPPQPPYQTHFCVVSKPNDCI
FPYDFMDAVKKKNGKVEIAATERTLLGFFLAKMHKLDPDIVVGHDIFGFDLEVLLQRITV
CKVPHWSKIGRLKRSNMPKLGGRSGFAEKSATCGRLVCDVEISAKELIRCKSYHLTELAA
QVLKTERATIPAENIKNLYSDSPHLLYLLELTWTDAKLILQIMCELNVLPLALQITNIAG
NVLSRTLMGGRSERNEYLLLHAFHDKNYIVPDKPSFKKAQQELAEGEEEGDSGKGKSRRK
KAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAHSTRKKTEEHDP
DEIPEVPDADLEMGILPKEIRKLVERRKQVKQLMKAQDINPDLYLQYDIRQKALKLTANS
MYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIMINTNSSSL
EEVYKLGNKVKTEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPLGDGRYSTKQELK
GLDIVRRDWCDLAKECGNYVIGQILSDQNRDVIVENIQRHLVDLGEKVANGTIPLNQYEI
HKALTKDPQDYPDKKSLPHVHVALWINSQSGRRVKAGDTVSYIICQDGSTLAASQRAYAL
EQLQKQAGLSLDTQYYLAQQVHPVVGRICEPIEGIDGVLIASWLGLDPSQFRAQQQAQRE
EEGDGFLGAPVQLTDEEKYKDCERFTFTCPLCTTDNVYDNVFEGAGTMVEAALLRCCNPT
CGGRPLDYPTHISNKLLLDIRKHIRKYYSGWLVCEDQACQNRTRRLPISFSRSGPICPAC
TRSTLKPEYSEKALYTQLCYYRFIFDWEYAVSKVLQTDERTRVKKLWKAEMEVYRKLKDV
PDRSLLASGYSEVNLSKLFQAFTSLK
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggtttctaagccagaaaaggacgtggacaacccggacggcgagaatgactgc
ggcctggcagtgggtcgctccaggagggagaagaaggagaagacagggaggaagtcagct
ctggagcagctcaagagagccaagaagggagagaaagtcaaatatgaggtggaggatttg
accagtgtgtatgaggaggtggatgaggaacagtactctcggatggtgagagaaaggcag
gatgatgactggatcattgatgatgatggcacagggtatgtggaggatgggagagaaatc
tttgatgaggatttggcagatgatgtgttagagaaaggcgccaaaggtaaagcaggcgct
aagggagcagactctaagaataacattaagaaggcagcggtggccaaacccaacagcatc
aaaaacctcttcatgaacagcaacgttaagaaacctgctgagaaagatgtggacctgtcc
aaagatgacctactaggggacattctacaggacctgcactctgataggccgtcacccctg
actcctccggtcgtcactctgaagaagaagaaggccctcggaactaccatgaaccccttc
tccatcaaaactcaatcccctaaggagtctccatctgcccaggggtcaaaggtgaaacac
cctcctcctggtgagctgactccccgggtgccttcccgcctccccacctccaggccctcc
gtccccgtggagaagaagagagtgaaggtgcaagaaattgaggaggaggacaactctctg
cagtttgacggggtggactttgacgaacccatggaggtggggcttgaacaggaaaaggag
gggcctgcaaatgaagaggaggagccagagaccaaaccagctgttaaagtggaacccaaa
gcagaaccacaggacctggtcctactgagtggcaagctgggggggacttggggtcaggag
gagggggacagtgaggcccccgtggaggtgcaagtcgaccccagccgtctcccattggcc
gaggggccagagggagagctcatgttccgcttctattggctggatgccttcgaggaccaa
tacagccaaccaggtgtggtgtacctatttggtaaggtgtggatcgagtcagccaaggcc
cacgtcagctgctgtgtgtcagtgaagaacatcgagaggaccatgcacttcctgccccgc
gaacacaaagtgaacccaaagacaggcgaggagacagacactccggtggggatgatggac
gtctaccaggaggtcaatgacctctctgagaagtttaagatcatgaagttcaagtccaag
aaagtggagaagagctacgcctttgagatcgctgacgtccctacagagtccgagtacctg
gaagtcagatactctgctgagtatccgtctctgccctcggacctcaagggtgcgactttc
tccaaggtgtttggaaccaacacctccagcctggagcacttcctcctcagcaggaagatc
aaaggaccctgctggctggacatcaagaccccacagttgagcagcgtgcctgtgagctgg
tgtaaggtggaagcagtggcgatgcgtagtgacctggtcactgtggtcaaagacctgcct
cctccacctctcactgtcatgtccatcagcctgaagactgtacagaaccccaagacacac
cacaacgagattgtgtccctggctgccttggtccaccacaggttccacctggacaaggcc
ccccctcaacccccctaccagacacacttctgtgtggtcagtaaacccaacgactgtatc
ttcccttatgacttcatggatgccgtaaagaagaagaatggtaaggtggagatagcagcc
actgagagaactctcctgggattcttcctggccaagatgcacaaacttgaccctgacatc
gtggtgggtcatgatatatttggctttgacctggaagtgctccttcagagaatcactgtg
tgtaaggtcccccactggtccaagatcggacgcctcaagaggtccaacatgcccaaacta
gggggtcgcagtggctttgcagagaagagcgccacctgtggccgtctggtgtgtgacgtt
gagatttcagccaaggagctgattcgctgtaagagctaccacctgactgagctggctgct
caggtgctgaagactgagcgagccactatacctgctgagaacatcaaaaacctctacagt
gactccccccacctgttgtacttgttggagttgacatggacagatgccaagctgatcctc
cagatcatgtgtgagctcaacgtgctgcctctcgccctgcagatcacaaacatagcaggc
aacgtactgtctcgtactctgatggggggtcgttctgaaaggaatgagtatctgctgctc
catgccttccatgacaagaactacatcgtacctgacaaaccctccttcaagaaggcccaa
caagaactggcagagggagaggaggagggggattctgggaaagggaagagtagaagaaag
aaagcagcctatgcaggtggactggtactggaccccaaagtgggtttctatgataagttt
gtgttgctgctggacttcaacagtctgtacccctccatcattcaagagttcaacatctgc
ttcaccaccgtacagagagaggcccacagcacacgcaagaagactgaggagcatgaccct
gatgagattccagaggttccggacgccgacctggagatgggaattctgcccaaagagatt
cgcaagctggtggaacgacgtaaacaagtgaaacagctgatgaaagcacaagacatcaac
cctgacctttacctgcagtatgacatccgtcagaaggctctgaagctgacggctaacagt
atgtacggctgtctgggctttagcttcagccgcttctacgccaagccactggccgcgctc
gttacacacaagggtagagagatcctgatgcacaccaaagacatggttcagaagatgaat
ctggaagtgatctatggcgacacagactccatcatgatcaacaccaacagctccagtctg
gaggaggtctacaaactaggaaacaaggtgaaaactgaggtgaacaagctctacaagctc
ctggagattgacatcgacggtgtgttcaagtctctgctgctgctgaagaagaagaagtac
gccgccctggtggtggagccgctgggggatggccgctacagcaccaagcaggaactcaag
gggctggacatcgtaagaagggactggtgtgacctcgccaaggagtgtggcaactatgtg
attggtcaaatcctgtcggaccagaaccgtgatgtcatcgtggagaacatccagcgtcac
cttgtggatttgggagagaaggtcgctaacggaaccattccgctcaaccagtatgagata
cacaaggccctgactaaggacccccaggactacccagacaagaagtctcttcctcatgtt
cacgtggctctgtggatcaactctcagagcggacgaagagttaaagctggagacacagtc
tcctacatcatctgccaggatggttctacattggcagccagtcagagggcctacgcgttg
gagcagctccagaagcaggccgggctgagcctggacacccagtactaccttgcccagcag
gtgcaccccgtggtgggcaggatctgtgagcccattgagggtatcgacggggtcctcatc
gcttcatggctgggtctggaccccagtcagttccgggcccagcagcaggcgcagagagag
gaggagggagatgggttcctaggagctccggtccaactcactgatgaggagaaatataaa
gactgtgaacgcttcacattcacctgccctctctgtaccactgataacgtctacgacaat
gtgtttgagggagcgggtacgatggtggaggcggctctgctgcgatgctgcaacccgacc
tgtggggggcgtcctctggactaccccacacacatcagcaacaagctgctactggacatc
cgcaagcacatcaggaaatactacagcggttggttggtgtgtgaggaccaggcctgtcaa
aaccggactaggaggctgcctatctccttctccagatctggacccatctgtcctgcctgc
acccgctctacactcaaaccagagtactctgagaaagccctgtacacccagctgtgctac
tacagattcatcttcgactgggagtacgctgtcagcaaagtactacagaccgacgagaga
acaagggttaagaaattatggaaggcagagatggaggtctacaggaagttaaaagatgtt
ccagaccgctccctccttgccagcggttactctgaggtcaacctctccaaactctttcaa
gccttcacttccctcaagtaa
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integrated database retrieval system
