Oncorhynchus mykiss (rainbow trout): 110535459 Help Entry 110535459         CDS       T07259                                  Symbol rttn Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:omy03037]     110535459 (rttn) Cilium and associated proteins [BR:omy03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    110535459 (rttn) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N TPR_Trm732_C ARM_LIN_2nd Nup188_N-subdom_III Motif Other DBs NCBI-GeneID:  110535459 NCBI-ProteinID:  XP_036791046 Ensembl:  ENSOMYG00000010729 LinkDB All DBs Position 11:20760571..20820549 Genome browser AA seq 2254 aa AA seqDB search MELSPLIKKIGHSLAEIRVRALKSIICKLDHSLLSVSDLVQEKMLFVYLLEWFNFPEVPM QEEVLQLISTLSKHPTAAQMLRDVGAVEFLTQLSPNVEPPLRAIIDGIFDLLFQLPELLP ACPTIYSNIHQLQNTTTAVPLEEDSPAVGYFQTKRPSHIDVPPQRIAVNNSVGCLKFSTF PWLALTTTDQHILSSNESSLRSNNHNLVRTTCELLRDVIMQDFPAEIFLQRPSIVQNLLS ILRLTPGESEAGYLRLQAVACLQQLCVGLRRRLRFHRDPSFYSAKEDPVSQNSSLSYSQE VHGGGAQRSLASSPGGECFPRPSVVGRNGQRPRGDGQDGDAASNSSSSSQRGGAAAQASR QTAPSPADAAQLELPDLGVEDVLVLQLQQLSLAQFTVATMEHAIPLLRTDGVRVFRGVCE LLCEAVVLLRDGVCDLVWDDTSLVGMELREKLKITMETLGDIMTYHESCSSDCPESSLVQ HRLAYVATAVFTIRLLQTILPLEKASGHLPESAVAVLLSLCLDRPFSLAYPSLAEAAVAY LEQVNPEGHDLYRRTSRAALWMESTCMFLKETQQQGDKNWLELLELADQAIDGLPYHQHL PIVKECIHICSYLWKFEQASPLLQTESQRVLLKLLTHPLLPVKTETYTCTLNVVKECLGV QNVVKPMSSVCSGVNFLLHPKVLYQISAFGLQDPIGKVNSAAKDILLFLLKCPLMMTAST WDRFNQALYPVIPILQSYAGTEDALGNCVLLISEVSNEVRDGVFPNTAKLRAALRLLFTK EPEVRAAAVQHLLPHLTSGEGATTVRPTLEGPVLSSLPSLFCLNNALDINLDSSDRSFLK VESVEKLFSIFTSDTVDLTLRRSAAEQLAVVLQETAMHPVLTSLGVTDKVICFITESVND HRKSMDCLLEPCVCILRKLVYADPSLRHLLAEKTPLLITLLRASLLVKENKGDVSEAAVL MCLLLFDEIATVEVWSDNSSSDVALSPFSLPVSVIRRYSLPFRAASHHAVSPYCSVLPPY SDLLSLTPAKETLQLAWNTAWHSGIDNLLEELRGIRSDVADFHGDLSLSGSQVLSLRATH LPSSLQDCVQDIVMAAGHASVTSALSRLRLHLLIDRMAITGTHTHSCRDTLRSLTWQPAI ARFVQVRPACVKDERLLVDVIAFLSAYFKQSHLGSEDKDLRWILELLLKQETNSLLDLLL GEDSQTHTPTHTASQGETEELVELRAQINQRLQRELTGFINTLLHRLRHTTDRFCLALTG PFESQLAVRFLQCLRVSDAPRFYGLPSLERNLLGMVSLTAQPGWSSHCPTMEPQSLCTKY LSGLLEVISSFYVEWGGNSMSFMGKGVTKNAVICLLHLSHEMMAQNKDKDFISQWSLGQE AGSDDPSGSQLGLAWLIPLWVDRDPEVRFASLGVGSALSSVPSGCQSLSSSCQNISGGLW GTLLNILLDQQESTMVRREAVFILQNLLVMPMPATADQVTDSTWQSPCVHDESSGVCLVG LQALQALLYHCQFFQHTALMATACYRGRYTFDLQPSARDPGPQDSTTEDADDSLRLWRPP NRVPVNPSRASGSLSTSSTLIIPGGSRLQSPVPTSLNATAQDTPASRLMAQGQSDTDTVD SVLSQDSRLADPAPDPTCVIVTPDLLSALCGLLANLLAVLPEFTLSALTHSQLFQSLASL VDAAAIARCLGELKTNALPGDQEDIKRQVLTLLKFLSSFSKFLKSCFILSSDLIGQMDFL KPLLANLFTVLTLDTKDLGDGTRGAVCVCWTDVLMLLATVVRRDGSAAYQSLSAALGRRW NTFTATLSVCVDQSFSDPPLHAAVLQFLCVVLSEEAKRRPLEVTTLNPDLQLTPLSEALN GVSGGQLCELLLESFEKRAFQDPVKKTTAKALMALLACSSTAQNHAAQAGLIDSCVEQMK LMHSHLHMESIRPGRGRRKESYMKEIKMSLEILRNSLYQNSQSKAVATDCRLAAVLHALW PWFLLDDAAMEAVLELLCVYTANCTTACSSLCCGLASGPRGPPGGSLMHCVMKLASGVAP DNSPVQQLAFSLLANLAINKDCKGVLHKSNFLQPFLSLPVPKPGSKTGAGGLLGLWLRLL LSVSFGEDGQLSVLRLTGALDLLADLAATQPQRHRHYGNGSRPITTTDNALLILHNVCFS SANKPKVLANDKAMRVLVSCLDSKEAEVRSIGASALWALLHNYQKAKTTLKCPSVRLRVH EAYKVAKKDAEKNPDIMNTYLLKCLENLIQLLNT NT seq 6765 nt NT seq  +upstreamnt  +downstreamnt atggagttatcaccgcttataaagaagattggtcactccttggcagagatcagagtccga gcattgaagagcatcatctgtaagctagaccactcgctcctctctgtctctgacctggtc caggagaagatgctgtttgtttacctgctggagtggtttaacttccccgaggtgccaatg caagaggaggtcctgcagctgatcagtactctgtccaagcaccctactgcagcccagatg ctgagagatgttggggcagtggagttcctcacccaactctcccccaacgtagagccaccg ttacgggccatcatcgacggcatcttcgacctgctgtttcagcttccggagctgcttcct gcttgtccaaccatttattctaatatacaccagctacagaacaccactactgcagttccc ctagaagaggactctccagcggtgggctatttccagacaaagaggccgagtcacattgat gttccaccacagaggatagcagtgaataactcagttggatgtctgaagttttctacattt ccctggttggctttgaccacaacagaccaacacatattgtcatccaatgagagttctcta aggagtaacaaccacaacttggtgaggaccacgtgtgagctcctacgtgatgtcatcatg caggacttcccggctgagatatttctccagcgtcccagtatcgtgcagaacctcctgtcc atcctgaggctgactccaggtgagagtgaggcaggctacctgagactgcaggcagtggcc tgtctacagcagctgtgtgtggggctgaggaggagacttcgtttccacagagaccccagc ttctactccgcaaaggaagacccagtgtcccagaactcgtcactgtcttactcccaggag gtgcacggggggggggcccagcgctccctggcctcgtccccaggaggagagtgctttcct cggccctctgtggtggggcgtaacggccaaagacccagaggggatggccaagatggggat gctgcctccaacagcagcagtagctctcagagaggtggagctgcagctcaggcctccagg cagaccgccccctcgcctgcagacgcagcccaactagagctgcctgatctgggggtggag gacgtcctcgtgctgcagctccagcagctcagcctggcccagtttactgtggccaccatg gagcatgccataccactgctcaggacagacggcgtacgtgtgttccggggtgtgtgtgag ctgctgtgtgaggcggtggtcctgctgagagacggtgtgtgtgatctggtctgggacgac accagcctggtggggatggagctgagggagaagctgaagattaccatggagacactgggt gacatcatgacctatcatgagagctgttcctcagactgtcctgagagttcattggtccag cacagactggcctacgtagccactgccgtcttcaccatcagactgctgcagaccatcctg cccctggagaaggccagtggtcatctcccggagagtgctgtggcagtcctcttgtctctg tgtctggaccggcccttcagcttggcctatcccagcctggcggaggctgcggtggcctac ctggagcaggtgaaccctgaaggccatgacctctacaggaggaccagccgtgctgctctc tggatggagtccacctgcatgtttcttaaggagacgcagcaacagggagataagaactgg cttgaattactggagctagcagaccaggccatagatggccttccataccaccaacaccta cctattgtcaaggagtgcatccacatctgctcctacttgtggaagtttgagcaggccagt ccgctgctccagacagagagccagagggttctactgaagcttctgacccatcccctcctc cctgtgaagactgagacctacacctgcaccctcaatgtagtcaaggagtgtctgggggtt cagaatgtggtcaagcccatgtcgtcagtctgtagtggggttaatttcctccttcacccc aaagtcctctaccagatcagtgcatttggactccaggacccaattgggaaggtaaactct gctgccaaggatattctgctcttcctgctgaagtgcccattaatgatgacagcatcaaca tgggacaggttcaaccaggcactttacccagtcatccccatattacagagttacgcaggc acagaggatgcactgggaaactgtgttcttctgataagtgaagtgtcgaacgaggtgaga gacggcgtgtttccaaacacagccaagttgagagctgcgctacgactactcttcactaag gagccggaggtccgagctgcagcagtccaacaccttcttccccacctgaccagtggagag ggggctactacagtcagaccaaccctggagggtcctgtcctctcctctctcccctccctc ttctgtctcaacaatgcactggacatcaacctggacagcagtgaccgatccttccttaag gtggagtcagtggagaagctgttcagcatctttacctctgacactgttgacctgaccctc aggaggtcagcagcagaacaactggctgtcgtcctacaggaaacagcaatgcacccagtg ttgacgagtcttggtgtaacagataaagtgatctgcttcatcacagagagtgtgaacgac cacaggaagagcatggactgcctgttggagccgtgtgtgtgtattctgagaaagctggtg tatgcagacccctccctgaggcatcttctggctgagaagacccccctcctcatcactctg ctcagggcttcattgcttgtcaaggagaataaaggggatgttagtgaggcggctgtgttg atgtgtctactgctctttgatgagattgccacagtagaagtctggtcggacaattccagc tccgacgtggctctctcaccgttctctcttcctgtgtctgtcatacgaaggtacagccta ccgttccgggccgcgtcccaccatgcggtgagcccctactgctctgtcctgcccccctac tctgacctcctctccctgacccccgccaaggagaccctgcagctggcctggaacaccgca tggcattctgggatagataacctcttggaggagctccgtgggatccgcagtgatgtcgcc gatttccacggtgatctgagcctttcagggtcgcaggttctgtcattacgggcaacacac ctccccagcagccttcaggactgcgtccaggacatcgtcatggcagcaggccatgcctct gtgacttctgcactctccaggctccgcctccacttgctgattgacaggatggccatcaca ggcactcacacacacagctgcagggacactctccgttccctcacctggcagcccgccata gcaaggtttgtgcaggtgcgtccagcgtgtgtgaaggatgagaggttgctggtggacgtt atagcgttcctgagcgcctacttcaaacagagccatttagggtccgaggacaaggacctc cgctggatactggagctactcctcaaacaggagaccaactcactgctggacctgctgctt ggcgaggactcgcagacacacacgccgacacacacggcgagtcagggagagacggaggaa ctagtagaactgagggcccagatcaaccagagactacagagagaactgacagggttcatc aacacattactgcaccgcctcagacacaccaccgacaggttttgcttggcgctgacaggg cccttcgagagccagctggcagtgcggtttctccagtgcctgcgggtgtcagacgcccca cgcttctacggcctcccgagtctggagaggaatctgctgggcatggtcagcctcacggcc caacccggctggagctcacactgtcccaccatggagccccagtctctctgcaccaagtac ctcagtggactactggaggtgatctcgtcattctacgtggagtgggggggtaactccatg tccttcatggggaaaggagtcaccaagaatgctgtcatctgtctgcttcacttgtcccat gagatgatggcccagaacaaagacaaggacttcatttcccagtggtctttgggtcaggag gcggggtctgatgaccccagtgggtcacagctgggccttgcctggctcatacctctgtgg gtggacagagacccggaggtgaggtttgccagcctgggtgtgggctctgccctgtcctct gtgcccagtggatgccagtctctgagtagcagctgtcagaatatcagtggaggtctgtgg ggaaccctgctcaacatcctcctggaccagcaagagagcaccatggtccgcagagaggcg gtgtttatcctccagaacctactggtgatgcccatgcctgccacggctgaccaggtcacc gactctacctggcagagtccgtgtgtccatgatgagtcttcaggtgtatgtctggtgggt ctccaagccctacaggctctgctctaccactgtcagttcttccagcacactgccctcatg gccacagcctgctacagaggcaggtacaccttcgacctgcaaccctcagccagggacccc ggcccacaggacagcaccactgaagatgcggatgactccctgaggttgtggagacctcct aaccgagtcccagtgaatcctagcagggcctctggctccctgtccacctccagcactctg atcatacctggaggctcaaggcttcaatcccctgtgcccacctctctcaatgctactgca caagatacacccgctagcagactgatggctcaaggtcagagtgacacagacaccgttgac tctgtcctctcccaggactccagactggctgaccctgctcctgaccccacctgtgtcatt gtgacgccagaccttttatcggcactctgcggcctcctggccaacctgttagccgtgcta ccggagttcaccctctcagccctcacacacagccagctcttccaatcactggccagtttg gtggacgcagcagccatagcgagatgtctgggtgagctgaagactaacgcactaccagga gaccaggaggacattaaacggcaggtcctgaccctgctcaagttcctgtccagcttctct aagttcctgaagtcatgtttcattctgagctcagatctgattggtcagatggacttcctg aaaccgctactggccaatctcttcactgtcctcacacttgataccaaggacttgggcgat ggtacccgtggtgctgtgtgtgtttgctggacagacgtgttgatgcttctggctactgtg gtgaggcgggatggctctgcagcctaccaatctctctctgctgcactagggagacgctgg aacacattcacagccacgttgtcagtgtgtgtggaccagtcgttcagtgaccctcccctc catgctgcggtactacagttcctgtgtgtcgtcctgtctgaggaggccaagagacgaccc ctagaggtcaccaccctgaacccggacctccagctgacccctctgtctgaggccctgaac ggcgtctccggtggacagctctgtgaactattactggagagttttgagaagcgtgcattc caggacccagtgaagaagacgacagctaaagccctcatggctctactggcctgcagttcc actgctcagaaccacgctgctcaagctggtttgattgacagctgtgtggagcagatgaaa ctgatgcacagccacctccacatggagtcaatcagacctggcagaggaaggaggaaggag agctatatgaaggaaataaagatgtctctggaaatcctcaggaacagtctttaccagaac agccaatcgaaagctgtggccactgactgtcgattggctgctgtgctgcatgccctttgg ccttggttcttattggatgatgctgctatggaggcggtcctggaactgctgtgtgtctac acagccaactgtaccacagcttgtagctctctgtgttgtggtttggcctctggcccccga gggcccccaggtggctccctgatgcactgcgtcatgaagctggcttctggggttgcccct gacaacagccctgtccagcagctggccttctccctgctggccaatctggccatcaacaag gactgtaaaggagtcctgcacaagagtaacttcctgcagccgttcctgtccctgcctgtc cctaagccaggcagtaagacgggtgccggggggctgttgggcctgtggctgaggctgctc ctgagtgtctccttcggtgaggacggccagctgagtgtcctgaggctgactggagccctg gaccttcttgctgacctggccgctacgcagccccaacgccaccgtcactatggcaatggg agcaggcccatcaccacgacggacaatgccctcctcatcctccacaatgtctgtttcagc tctgccaacaaacccaaagttctggccaacgataaggccatgagggtgctggtgtcctgt ctggacagtaaagaggctgaggttcgctctataggggcctcggcactatgggccctgctc cacaactaccagaaggccaagaccactttgaagtgtccctctgtcagactcagggtgcat gaagcctataaagttgctaagaaagatgcagagaaaaatcctgacatcatgaacacctac ctgttgaagtgccttgagaacttaattcagctgctgaatacctga

DBGET integrated database retrieval system