KEGG   Oncorhynchus mykiss (rainbow trout): 110535465
Entry
110535465         CDS       T07259                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110535465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110535465
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110535465
 Complex B
    110535465
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 110535465
NCBI-ProteinID: XP_021476153
Ensembl: ENSOMYG00000012004
LinkDB
Position
11:21131483..21149309
AA seq 1016 aa
MADRTPGGTQKANAKALLESKLKSFSIGKMAVSKRTLSKKEQEDIKKKEDERAAAEIYEE
FLAAFEGGEGKVKAFVRGGIANATKEEAASDDKKGKLYKPKSRFETAAAPKSSFLPLETP
PQFLTLDKRHTLKKTNEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLSGMEG
KRSSLDSSSRRNRPSSVLDDAAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNAKMIMNFEMKLGWGKGVPIPP
HPIYIPPSMVEHTLPPPPSGLPFNAQPCERLKNPNAALLPPPKNKEEFDKTLSQAIVKVV
IPTERNLLSLIHRMIEFVVREGPMFEAMIMNRELSNPMYRFLFENQSPAHVYYRWKLYSI
LQGEAPTKWRTDDFRMFKNGSLWRPPPLNPYLHGNFEEGEGPEEEEEEPGKKGCLKEEER
DQLEEMLRALTPRKGDIAEAMLFCLLHAEAAEEIVECVTESLSILKTPLPKKIARLYLVS
DVLYNSSAKVANASYYRKYFETKLCQVFSDLNATYKTIQGHLQSENFKQRVMSCFRAWED
WAVYPDPFLIKLQNIFLGLVNLSADKEAPAPITVEKPSVEHLAPGLLSQPEPAEDIDGAP
IGEDMDGASLEDVDGVPIGLDGGTMVDGAPLGSAPLGSAPLDRAPQGMDDLDGVPIKALE
EDIDGVPLDHAAAKAASFKVAPSKWEAVDESELEAQAVTTSKWEIFEQPEEKKDEDDSDD
DTKSSRSEEPPSYPNPIRDDLDSKTKHSEMNEDRRTKLREIEVKVMKFQDELESGKRPKK
SGQSLQEQVENYREKLLQKEKEKEKLEREKEREKKDKEKSEARSKDIKKEKEESTPTRKD
RRGLSPVVARKRRHSGSPGSPPRSSSRRVRSPSPRSERSERLYSKDVGSSRSRSSHKDSP
RTTIIKKSSKRSPSLSRTPKRSRRSRSRTPKKSTKKSRSKSRSPHRSHKKSKKSKH
NT seq 3051 nt   +upstreamnt  +downstreamnt
atggcggacagaacgcctggtggtacgcagaaagccaacgcaaaggcgctgctggagagc
aagttgaagtccttcagcattggaaaaatggccgtgagtaagaggaccctaagcaagaag
gaacaagaggatatcaaaaagaaggaggatgagcgggcagctgcagagatctatgaagaa
ttcctggctgcgttcgagggaggagagggaaaggtcaaggccttcgtccgggggggcatt
gctaatgcaactaaagaggaggctgcttctgatgataagaagggcaagctgtataaacct
aagtcacgctttgaaacagcagcagcaccgaaaagcagcttcctgcctttggaaacccct
ccgcagtttttaacattagataaaagacatacactgaagaaaacaaatgaaaaggaaaag
aagaagagtaatctagagctctttaaggaagaacttaaacaaatacaggaagagcgggat
gaaagacacaagatgaaaggcagagtcagtcgatttgaacctctctccgggatggaggga
aaacgctcctcattggatagttcttcaagaagaaaccgtccgtccagtgttttggatgac
gctgcacctggttcccatgacgtcggagacccctctacaactaacttatacctcggaaac
atcaacccacagatgaatgaggagatgctgtgtcaggagtttgggcgctacggccctctg
gccagcgtgaagatcatgtggccgcggacagatgaagagagggccagggagaggaactgt
ggctttgtggccttcatgaaccggagggatgcggagagagctctgaagaatctcaacgcg
aagatgatcatgaactttgaaatgaagctaggctggggtaaaggcgtgcccatcccccct
caccccatctacatccccccgtctatggtggagcacactctccccccgccgccctccggc
ctgcccttcaacgcacagccctgcgagaggctgaagaaccccaacgccgccctgctccct
ccgcccaagaacaaggaggaattcgacaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgt
gagggccccatgttcgaagccatgatcatgaatcgagagctcagcaaccccatgtacagg
tttctgtttgagaaccagagcccagcacacgtgtactaccgctggaaactctactccata
ctacagggagaagcaccaacaaaatggcggacggacgacttccgcatgttcaagaacggc
tcgctgtggcgccctcctcccctcaatccctacctgcacggcaattttgaggagggggag
gggcctgaggaggaagaggaggagcctgggaagaaaggctgcctcaaagaagaagagcgt
gatcagctggaggagatgttgagggctctgactcctagaaagggggacatagccgaagcc
atgctgttctgtctactgcacgccgaggctgctgaggagatcgtagagtgtgtcacagag
tccctctccatcctcaagacaccactccccaagaagattgcacggttgtatcttgtctct
gatgtgctgtacaactcatctgctaaagtagccaatgcgtcgtactacagaaaatacttt
gagaccaaactttgccaggtcttctcagacctcaatgcaacttacaagacgatacagggt
cacctgcagtctgagaactttaagcaacgagtgatgtcgtgtttccgtgcgtgggaggac
tgggccgtgtacccagatcccttcctcatcaagctgcagaacatcttcctgggtctagtc
aacctatcagctgataaggaggctcccgctcccatcacagtagagaaaccatcagttgaa
cacctggcccctggtctactgtcccagcctgagccagcagaggacatcgacggggccccc
atcggggaggatatggatggggcctctctggaggacgtggatggggtcccaataggactg
gatggagggaccatggtggacggagccccccttggctctgcccccctaggctccgccccc
cttgacagagccccgcaggggatggatgatctggacggagtgcccatcaaggccctggag
gaggacatagacggagtgcccttggatcatgctgcagccaaagcagcatcctttaaagta
gcaccttcaaaatgggaagcagtggacgagtctgagctagaagcacaggccgtgaccacc
tctaaatgggaaatctttgagcagccagaggagaagaaggacgaggatgacagtgatgat
gacaccaagagttcccggtcagaagagcctccgagttaccccaaccccatcagagacgac
ttggactccaagaccaagcactctgagatgaatgaggacagacgcaccaagctccgggaa
atagaggtcaaagtgatgaagttccaggatgagttggagtctgggaaaaggcccaagaag
tctggccagagtctccaagagcaggtggaaaactacagagagaaactcttacagaaggaa
aaagaaaaggagaaactggaacgagagaaagagagggagaaaaaagacaaggagaaaagc
gaagctcgctctaaagacatcaagaaggagaaggaggagtcaactccaaccaggaaagac
aggcgtggcctgtctcctgtggttgctaggaaacggcgccacagcggctcacccggcagc
cccccacggagcagcagtagacgggtgcgctccccatccccccgctccgaaaggtcagaa
cgcctctactccaaggacgtagggtcatcacgatcccgctcctcccacaaagactcccct
cgaaccaccatcatcaagaagtcctccaaaaggtctccctcattatcccgcacgcccaaa
cggtcccggaggtcacgctccagaacacccaagaagtccaccaaaaaatcccgttcaaaa
tcacggtccccacaccggtcccacaagaaatcaaagaagagtaaacactga

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