Oncorhynchus mykiss (rainbow trout): 110535483
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Entry
110535483 CDS
T07259
Symbol
abca4a
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110535483 (abca4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110535483 (abca4a)
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110535483 (abca4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_22
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
110535483
NCBI-ProteinID:
XP_021476179
Ensembl:
ENSOMYG00000015319
LinkDB
All DBs
Position
11:complement(22406366..22460501)
Genome browser
AA seq
2319 aa
AA seq
DB search
MGTDSQVRLLLWKNWTLRKRQKMRFFMEIMWPVVLFIGLVWLRTANPLYRQHECHFPNKA
MPSTGILPWIQGIFCNANNPCFQYTTRGEGPGLVSNYNDSILARFYLDAQELLLSDPEFL
QLGRLWRELFTMSTFMDTLRTSPEQVSGRGLKVEDILKDDETLTSFLLRDVPLSEFVVNE
LVNAKIRPEQFVFGVPDLHLKDIACSQTLLEQFIIFPSRRGLYRVHSSICALTPQRLQTI
EDRLYANVDFFKLFRQLPRVLDNHSSGVDLHFWARVLSATYEKLRELSERNSSKALVEVM
SPLLQSQVDSPPSFRQLMGAVSSLVCGYMEGGFSRVASFNWYEDNNYKAFMGINDSTRGG
QGQYTYDHTATPFCNDLMKELESNPITRIMWSSVKPMMMGKILYAPDSPAVRKIIRNANT
TFEELERLRTMGRAWEEVGPQVWAFFQDSVQMNMIRDTIRNPTVRDYIDRSLQDTEFSSK
HILNFLYNGPIEDRDYDMPNFDWRNVFNFTDQVIRMMNQYGECLILDKFSGLNDEEQMTH
RALSLMGESKFWAGLVFMDTYPWTTKVPPHVRFKIRMDIDSVERTNKIKDRYWDPGPRAD
PVDDLRYVWGGFAYLQDMIEHGIIRTQTGKDWPLGVYLQQMPYPCYVDDLFMLTLNRCFP
IFMVLAWVYSVSMTVKSIVLEKELRLKETLKTMGVTNGVLWVTWFIDSFLMMAASTSLLT
VIIMGGKVLNYSNPLILFLFLLTFTTATIMQCFLLSVFFNKANLAAACSGIIYFTLYLPH
ILCFAWQDRITKDDKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIQTSPLEGDEYSF
LTSISMMALDTVLYAVLAWYLDNVFPGQYGIGRPFYFPILPSYWLNSRPPKPKELEKPRF
DNLVNQAEEKQKTNHEPGDEQKTKAPDEELPSCKHQDKRERLGKGKTEEEEEEEEENKKN
QEEKQNGEKEGQPSHAYFEGEPAGLVEGVCVQNLVKVFGRGQKPAVDGLSITFYESQITA
FLGHNGAGKTTTLSILTGMFPPTSGTASIYGKDIRTDMDTIRHSLGMCPQHNILFHHMTV
EEHILFYSLLKGRSLSEAQLEVENMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGA
KVVILDEPTSGVDPYSRRSIWDLLLKYRSGRTVILSTHHMDEADLLSDRVAIISQGRLHC
CGSPLFLKNCFGAGFYLTLVRRMKYEGPRTKMKCDCTDECSCKCSTCTTYKEESPQAKAP
DRQMDGDLSSITGLVHHHVPEARLIEAIGQELTYLLPNQGFQPRAYASLFRELEETLSDI
GLSSFGVSDTSLEEIFLKVTADSEVKSGKTTQEADGETQANRQGNSGGSEGSEGRGSRQV
KGVCLVLKQLFALLIKRFHHAIRSHKDFFAQIVLPASFVFVSLMFTTIVPPFGEYPSLTL
SPWMYGRQFTFFSNERILDPEMRYFGEVLLNKPGFGTRCMVDEPLEDFPCNNITTEWEMP
LLNPALIDMLDGPEWTAVNPSPGCQCSTPRKLTMLPVCPEGAGGITPPQRIQSTGDVLVD
LTGRNISDYLVKTYPSLIKASLKSKYWVNEQRYGGISVGGQLPVLDVDPKTIQDAASQLG
RLLNVTGGKYSKQTLKDIGTFLRYMESEYNVKVWYNNKGWHAMVAFMNVANNAILRANLP
KDASLDVYGITTINHPLNLTKEQLSEVTVLSTSVDAMVAICVVFAMSFVPASFVLYLIQE
RVTQAKHLQFVSGVSPVIYWMANFLWDMVNYSISAALVVAIFMVFDKKCYTSPTNLQPLT
ALLMLYGWSVTPMMYPMSYIFSIPSTAYVSLSCINLFIGINSSAITFILDLFDSTAALYK
CNQLLKKMLLIFPHYCLGRGLIDMAMNQAVTDVYARFGEDFSLDPYSWDFLGKNLVFMAV
EGFVYFIMNILIQYRFFLDHWITDCKTDPIVEEDVDVAQEREHIYNGGSKNDILKIKDLT
KTYMGKTKPAVDRICVGVSPGECFGLLGVNGAGKTTTFKMLTGDTDVSSGEASVTGHSIL
TNILDVHQNMGYCPQFDAIDDLLTGREHLHLYARLRGVPESEISKVADWAIQKLGLADYA
GHTAGTYSGGNKRKLSTAIAMIGCPPLVLLDEPTTGMDPHSRRFLWNSIMSVIQDGRAVV
LTSHSMEECEALCTRLAIMVNGTFQCLGTIQHLKYKFGDGYVVTMKIQASTPGCPPDLNP
AEAFMESTFPGCVQREKHYNTLQYEIASSSLARIFQLVLANKDRLNIEDYTVSQTTLDQV
FVNFAKQQSGEDDGMVLHPRAAGARRKEIKVTPLSCLGK
NT seq
6960 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggacagtcaagtccgattgctgctgtggaagaactggacccttcgcaagaga
cagaagatgcggttcttcatggagattatgtggccagtggttctattcattggactagtg
tggctgaggacagctaaccctttataccgtcaacatgagtgtcactttcccaacaaggcc
atgccctcgactggcatccttccatggatccaaggaatcttctgcaatgccaacaaccca
tgcttccagtacaccaccaggggagagggccccgggctcgtctccaactacaacgattcc
atactggctcggttctacttggacgcccaggagcttcttctgagtgacccagagttcctg
cagctgggtcggctctggagggaactgttcaccatgagcaccttcatggacaccctgcgg
accagcccagaacaggtctcaggtcgagggctgaaggtagaggacattctgaaggatgat
gagactctgacgtcctttctcctaagggatgttcctctgtcagagtttgtggtcaatgag
ctggtcaatgccaagatcaggcctgagcagtttgtgtttggcgtccctgacctccacctg
aaggacattgcctgcagtcagaccctgctggagcagttcatcatcttccccagccgcagg
gggctgtacagggtgcacagcagcatttgtgccctcacaccacagagactacagaccata
gaggacaggctctacgccaacgtggacttctttaaactcttccgtcagcttccccgggtg
ttggataaccactccagcggtgtcgacctacacttctgggccagagtactctctgccacc
tacgaaaagctgcgagagttgtcagagaggaacagctccaaagcgctggtggaggtgatg
tcccccctgctccagtcccaggtggactctcccccatctttcagacagctgatgggggct
gtgtccagcctggtgtgtggctacatggaggggggcttctctcgggtggcctccttcaac
tggtatgaggacaacaactacaaggccttcatggggatcaacgatagcacccggggagga
cagggacagtacacctacgaccataccgccactccgttctgtaatgatctgatgaaggag
ctagagtccaatcccatcaccaggatcatgtggagctctgtcaagcccatgatgatgggg
aagatcctctacgcacccgactccccagccgtcagaaagatcatcagaaacgccaacacc
acatttgaggagctggagaggctgaggaccatgggtcgggcctgggaggaggtgggccct
caggtctgggccttcttccaggacagcgttcagatgaacatgatcagggataccatacgg
aatcccacggtgagggactacattgacaggagtctacaggacacagagttctcctcaaaa
cacatcctcaacttcctgtacaacgggccaatagaagacagggactacgacatgcccaac
tttgattggaggaatgtcttcaacttcacagaccaagtcatccgtatgatgaaccagtat
ggagagtgtctgatcctggataagttctctgggctgaacgatgaggagcagatgacccac
agagctctgagtctgatgggggagagtaagttctgggctggcctggtcttcatggacacc
tacccctggaccaccaaggttccaccccacgtccggttcaagatccgcatggacatcgac
tcagtggagcgcaccaataagatcaaggacagatactgggaccctggtcctagggccgac
cctgtggatgatctccgttacgtgtgggggggttttgcctatctgcaggacatgatagag
catggcatcatcaggacccagacaggcaaggattggcccctcggtgtctacctacaacag
atgccgtacccatgctacgtggacgacctcttcatgctgacattgaaccgttgcttcccc
atcttcatggtgctggcgtgggtctactcagtgtctatgactgtgaagagcatcgtcttg
gagaaggagctcaggctcaaagagaccctgaagaccatgggggtcaccaatggggttctg
tgggtcacatggttcatagacagcttcctcatgatggctgccagcacttccctgctcacg
gtgatcattatgggtggtaaggtgttgaactacagcaaccctctgatcctgttcctgttt
ctgctaaccttcaccacggccaccatcatgcagtgtttcctactcagtgtcttctttaac
aaggccaacctggctgcagcctgcagcggtatcatctacttcaccctctacctgccccac
atcctctgctttgcatggcaggaccgcatcaccaaggatgacaagatcatggcgagcctg
atgtcccaggtggcgtttggctttgggacagagtacttgtcccgttatgaggagcagggt
ctgggtctgcagtgggacaacatccagaccagccctctggagggggatgagtactccttc
ctcacctccatctctatgatggccctggatactgtactctacgccgtccttgcctggtac
ctcgacaacgtcttcccagggcagtatggaattggtcggccattttatttccccatcctg
ccctcctattggctcaactccagacccccaaagccaaaagagttggagaaacccaggttt
gacaacctggtaaaccaggctgaagagaagcagaagaccaatcatgaaccaggtgacgag
cagaagactaaggcaccagatgaggagctgccatcctgcaaacaccaggacaaacgagag
aggctggggaaggggaaaacagaggaggaagaggaggaggaggaggagaacaagaagaac
caggaggaaaaacaaaatggagaaaaagagggtcagcccagccatgcctactttgagggg
gaaccggcaggactggtggagggtgtgtgtgttcagaacctggtcaaggtgtttggtagg
ggacaaaaacctgcggtagacggactgagcatcaccttctatgagagccagatcactgct
ttcctggggcataatggagctgggaagaccaccaccttgtctatcctgacggggatgttc
cctcccacctctgggacagcctccatctatgggaaggacatccggacagacatggacacc
atcaggcactctctgggcatgtgtccccaacacaacatcctctttcaccatatgaccgta
gaagaacacatcctgttctacagcctgctgaaggggaggtctctgtctgaggctcagctg
gaggtagagaacatgctggaggatctgggcctgccccacaagagagacgaggaggcacag
aacctctcaggcggcatgcaaaggaagttgtctgttgctatggcatttgtgggcggtgcc
aaggtggtgatcctggacgagcccacatcgggggtggacccctactccaggagatctatc
tgggacctactactcaagtaccgatcaggacgtacagtgattctgtccactcaccacatg
gacgaggctgacctgttgagtgaccgtgtggccatcatctctcagggtcgtcttcactgc
tgcggctccccgctcttcctcaagaactgcttcggtgccgggttctacctcaccctggtt
cgacgaatgaaatacgagggacccaggaccaagatgaagtgtgactgtactgatgagtgt
tcgtgtaaatgctccacctgtaccacgtacaaagaagagtcacctcaagccaaagccccg
gacagacagatggacggtgacttgtcaagcatcacagggctggtccaccaccatgtccca
gaggcccgtttgatcgaggctatcggccaggagttgacctacctgctacccaaccagggc
ttccagcccagggcctacgcctccctcttcagagagctggaggaaaccctctctgacatc
ggcctcagcagcttcggggtctccgacacatcactggaggagatattcctgaaagtgaca
gcggacagtgaagtcaaatctggcaaaactacacaagaggcagatggggagacccaggcc
aacaggcaggggaattctgggggctcggagggcagcgaggggcggggctctagacaggtc
aaaggtgtctgtctggtcctgaaacagttatttgccctgctcatcaaacggtttcaccac
gccataagatcacataaggacttctttgctcagatagttttgccagccagttttgtgttc
gtatcactgatgttcactacgatcgtacctccgtttggagagtaccccagcctgaccctt
agtccctggatgtatggacgacagttcaccttcttcagtaacgagcgtatcctggaccct
gagatgaggtactttggagaggtgctgctgaacaagcctggctttgggactcgctgcatg
gtggatgaacctctggaggatttcccatgtaataacatcacaacggagtgggagatgccg
ctactgaaccctgctctgatagacatgttggatggaccagagtggaccgcagttaaccct
tccccaggctgccagtgtagtacccctaggaaactcaccatgctgcctgtctgccctgag
ggagcaggggggataacaccaccacagaggatccagtcgacaggtgatgttctggtggac
ctaacaggcaggaatatctctgattacctggtgaagacttacccctccctcatcaaggcc
agtttgaagagcaaatactgggtgaatgaacaaaggtatggaggtatatctgtcggggga
cagcttcctgtgttagatgtggaccctaagaccatccaggacgcagcgtcacagctggga
cgactgctcaatgttactgggggtaaatactccaaacaaactctgaaggacataggaacc
ttccttcgctacatggagagtgaatataatgtcaaggtgtggtacaacaacaagggctgg
catgccatggtggccttcatgaacgtggccaacaacgccatcctcagagccaacctgccc
aaagatgccagcctggatgtatacggcatcaccactatcaaccaccctctcaaccttacc
aaggaacaattgtctgaagtcactgttctgagcacctcagtggatgcgatggtggctatc
tgtgttgtcttcgccatgtcctttgtcccagcctcctttgtgctctacctcatccaggag
agggtgacccaggccaaacacctccagttcgtcagcggggtcagtcccgtcatctactgg
atggccaacttcctctgggacatggtgaattactctatcagtgcagcacttgtggtggct
attttcatggtctttgacaagaagtgctacacgtcgccaaccaacctccaacccctgaca
gccctgctcatgctctatgggtggtctgtgacgcccatgatgtaccccatgtcctacatc
ttcagtattcccagcacagcctacgtctctctgtcctgcatcaacctgttcattggcatc
aacagcagtgccatcaccttcatccttgacctgtttgacagcacagcggcgctgtataag
tgtaaccagctgctgaagaaaatgctgctgatcttcccccactattgtcttggccggggt
ctgatcgacatggctatgaatcaggctgttactgacgtctatgcccgctttggcgaggac
ttcagtctggacccctacagttgggactttttagggaagaacctggtcttcatggctgtt
gagggctttgtctatttcatcatgaacatcctgatccagtaccgcttcttcctggatcac
tggatcacagattgtaagacggatcccatcgtggaggaagacgtggatgtggcccaggag
agagaacacatctataatgggggaagcaagaatgacatcttaaagattaaagatctcacc
aagacatacatggggaagacaaagccagctgttgacaggatctgtgtgggagtgtcacct
ggggagtgctttgggcttctgggtgtgaacggagcagggaagaccaccacctttaaaatg
ctgaccggagacactgatgtcagctcaggagaagcctctgtcactggtcacagcatcctt
accaatatcctggacgtgcaccagaacatgggctactgcccccagtttgatgccatagat
gatctgctgactggcagagagcacctccatctgtatgcccgcctcagaggggtgcctgag
tccgagatcagcaaggtggcagactgggcaattcagaagctgggtctggctgactatgct
ggccatacagccgggacctacagcggcggcaacaagagaaaactatccacagccattgcc
atgatcggctgtcctccactggtcctgctggacgagcccacgacaggcatggacccccac
tcacgtcgtttcctgtggaactccataatgagtgtaatccaagatggccgagcagtggtc
ctcacctcacacagtatggaggagtgtgaggctctgtgtacccgtctggctattatggtc
aatggcaccttccagtgtcttggtaccatccagcacctcaaatacaagtttggtgatggt
tacgtggtcaccatgaagatccaggcctccacaccaggttgtcccccagacctgaaccca
gccgaggccttcatggagagcaccttccctggctgtgtccagagggagaaacactacaac
actctgcagtatgaaatcgcctcttcctccctggctaggatcttccagctggtcctggcc
aacaaggaccgcctcaatatagaggactacaccgtctcccagacgacactagatcaggtg
tttgtgaactttgccaagcagcagtcaggagaggacgacggaatggtgctgcacccgagg
gccgctggggcacggagaaaagaaatcaaggtcacacccctaagttgtctggggaaatga
DBGET
integrated database retrieval system
