Oncorhynchus mykiss (rainbow trout): 110535567
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Entry
110535567 CDS
T07259
Symbol
drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110535567 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110535567 (drosha)
03009 Ribosome biogenesis [BR:
omy03009
]
110535567 (drosha)
03036 Chromosome and associated proteins [BR:
omy03036
]
110535567 (drosha)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
110535567 (drosha)
Messenger RNA biogenesis [BR:
omy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
110535567 (drosha)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
90S particles
RNase
110535567 (drosha)
Prokaryotic type
rRNA processing factors
110535567 (drosha)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
110535567 (drosha)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
Motif
Other DBs
NCBI-GeneID:
110535567
NCBI-ProteinID:
XP_036791192
Ensembl:
ENSOMYG00000009048
UniProt:
A0A8C7PS57
LinkDB
All DBs
Position
11:complement(31171381..31328624)
Genome browser
AA seq
1417 aa
AA seq
DB search
MSFHQGRGGGGCPRGRAPPGQHGGQHGSHQNYRPTNLGPPPPQPPMPPYHYDPQAQHSSS
HSYGGQGNSGGGGYITAHSDYMSYPPPVPTQGGMTASPLSQCPVRPPFPNPNPQSHPNFP
PPPLAGNTSGSSISGSPVSAQSAYHYMMPSVPPPPFPHPPGMPPTMPPQSMSYHQPPYSM
NYSHPPFPPLPNFSPGNYGSHQGPSSFKPDHGGFRHSPHGGGGQQYKAEKQQQMDDRSQR
SPERGRGGRHDDLRQQKGGYAYGSRGGGDRHKMDFPMNQRGKDRGRSPDRRRPEGGRHRS
EYEQRGRTPPTRHRSRERSRERHRHRDSRRSQSPDRHRKRPRSRSGSRERKRGRWEEERD
RRSDGPGMSRDRERSYTSARSRDTEPEVSIDRDREREMERGERERERGERERGERERGER
EKGEGDEREEDELLKPAWIRCTHAENYYSSDPMDQVGDSTVVGTSKLRDLYERFEEELVK
RQERAQSARPKWDPPKTKLDEEPGTVLISDSIPKEECHSHSSSESDCESDGGGSTCSSSS
DSDVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAKSRRTGIRHSIYPGEES
VKECRPMNNNSGKLYHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHMPLTNIPL
CRVIRFNIDYTIHFIEEMTPENYCVKGLELFSSYLFQDILELYDWNLTGPEWDNQSPGCQ
KFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELKWQKYAEEC
KGMIVTNPGMKPSSVRIDQLDREQFNPEVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSY
VKLRHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDLC
QHAMMLPVLTHHIRYHQCLKHLDDLIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSL
SNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVE
FLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLR
HAMANCFEALIGAVYLEGGLEESKQLFGRLLFNGEDLREVWLNYPPHPLQVQEPQTDRQL
IETSPVLQKLTDFEDTIGVMFTHCRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLV
ATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTL
ADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGK
EPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQM
AHQKRFIERKYRQELKEMRRERDRQEKEGDEPEDSRK
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcagggtcgaggaggtggaggctgccccagaggaagagcccccccaggt
caacatgggggtcaacacggctcccaccaaaactaccggcccaccaacctaggaccccca
cctccccagccgccaatgcccccctaccactacgacccccaggcccagcacagctcctct
cacagctatggtggccaaggaaacagtggtgggggtggttacatcactgcacactcagac
tacatgtcatacccccctccagtgcccactcaggggggtatgacggccagtcccctcagc
cagtgccccgtacgcccccccttccccaaccccaacccccagagccaccccaacttcccc
cctcctcctctcgccggcaacacctctggaagctccatatctgggtctcccgtgtcagct
cagagtgcttaccactacatgatgccctccgtaccccctccacctttccctcaccccccc
ggcatgcctcctaccatgcctccacagtccatgagctaccatcaacccccctactccatg
aactactcccatcctccattccctcctctgcccaactttagcccagggaactacggctcc
caccagggtcccagctccttcaagccagaccatgggggcttcaggcacagtcctcatgga
ggaggagggcagcagtataaggctgagaagcaacagcaaatggacgacaggagtcagagg
tcgccggagagaggcagagggggtcgccatgacgacctccggcagcagaagggtggctat
gcttacggcagtcgtggtggtggcgacagacacaagatggacttccccatgaaccagaga
gggaaggatcgaggcaggagtccggacagacgcaggccggagggagggagacatcggtca
gagtacgaacagcgtgggaggactcctcctacccgtcaccggagtcgagaacgcagcagg
gagaggcatcgccacagagacagtcggaggtctcagtcacctgaccgacacaggaagcga
cctagaagtcggtcaggcagcagagagaggaagcgtggtcgttgggaggaggagagggac
cggaggtccgacggaccggggatgagcagagacagagagcgcagctatacctccgccagg
agccgagacacagagcctgaagtctccatagatagagaccgggagagagagatggagaga
ggcgagagggagagggagagaggcgagagggagagaggcgagagggagagaggcgagagg
gagaaaggggagggagatgagagagaggaggatgagttgctgaagcctgcgtggatccgc
tgtacccatgctgagaactactactccagcgatcccatggatcaagtgggtgattctacg
gtggtggggaccagtaagctgagggacctgtacgaacgcttcgaggaagagctggtcaag
agacaggagcgtgctcagtcggcccggcccaaatgggacccccccaagaccaagctagat
gaggagcccggtactgtattgatatcagatagtatccccaaagaggagtgccacagtcac
agcagcagtgagtcagactgcgagtctgacgggggaggcagtacctgctccagcagctct
gactctgacgtgtttgacgtgatcgctgagatcaagaggaagaaggcccatccagaccgt
ctgcatgacgagctgtggtacaacgacccaggacagatgaacgatgggccgttgtgtaag
tgcagtgccaagtccagacgcacagggatacgccacagcatctaccctggagaggagtcg
gtgaaggaatgtcgtccgatgaacaacaactctgggaagctctaccactacagaatcact
gtgtctccacctactaacttcctgacagacaggcctacggttatcgagtacgatgaccat
gagtacctgttcgaaggcttctccctcttctcccacatgcctctcactaacattccattg
tgcagagtgattcgtttcaacatagattacaccattcactttattgaagagatgacacca
gagaactactgtgtgaaaggactggagctgttctcttcctacctattccaggatatactg
gagctctatgactggaacctcacaggtccagagtgggacaaccaatctcctggatgtcag
aagttccacttcatgcctcgctttgtccgcttcttacctgacggtggtaaggaggtgctc
tccatgcaccaggttctcctctacctcctgcggagctccaagcctctggtccctgaggag
gagatagctgacatgctgcagtgggaggaactgaagtggcagaagtacgcagaggagtgc
aagggcatgatcgtcaccaaccctggcatgaagcctagctctgtgcgtattgaccagctg
gacagagagcagttcaatccagaggtcatcaccttccccatcatcgtccacttcgggatc
cggcccgcccagctcagctacgctggagacccccagtaccagaagctgtggaagagctat
gtgaaactacgccacctgctggctaacagccccaaggtcaagcagatagacaagcagaag
ctaacacagagggaggaagcccttcagaagatccgccagaagaacaccatgcgccgggag
gtgaccgtggagctcagcagccagggcttctggaagactggcatccgctctgacctctgt
cagcatgctatgatgttgccagtgttgacccaccacatccgctaccaccagtgtctgaag
cacctggacgacctgattggctacgtcttcaaggagcgctgtctgttacagttggccatg
actcaccccagccaccacctgaactttggcatgaacccggaccacgcccgtaactccctg
tccaactgcggcatccgccagcccaagtatggggacagaaaggtccaccacatgtacatg
aggaagaagggaatcaacaccttgatcaacatcatgtctcgtcttggacaagatgatccc
tccccctccaggatcaatcacaacgagcggctagagtttctcggcgacgccgtcgtggag
tttctcaccagtgttcatctgtactacctgttccccagtctggaggaaggagggctcgcc
acctacagaacagccattgtacagaaccagcacctggccatgctagcaaagaaactggag
ttggatcgcttcatgctgtatgcccacggcccagacctctgtagggagtcagacctgaga
catgccatggccaactgctttgaagcactcataggagcggtatatttggagggcggtctg
gaggagtctaagcagctgtttgggaggctgcttttcaacggagaggacctccgagaagtg
tggctcaactacccgccccatcctctgcaggtgcaggagccgcagacggacaggcagctg
atcgagacgtctccggtgcttcagaagctgacagactttgaggacaccatcggtgttatg
ttcacacactgtcgcctgctggccagagctttcacactgaggaccgtgggcttcaaccac
ctcacactgggccacaaccagaggatggagttccttggagactccatcatgcagctggtg
gctacagagtacctcttcatccatttccccgaccaccacgaaggacacttaacgctgttg
cgtagctccttggtcaacaaccgtacccaagccaaagttgcagaggagctgggcatgcag
gagtttgcgatcactaacgacaaaactaaacggccagtggccctccggaccaagaccctt
gctgacctgctggaatctttcatcgcggcgctctacatcgataaggatctggagtacgtt
cacaccttcatgaacgtctgcttcttccctcgactgaaggagtttatcctaaaccaggat
tggaacgatcctaaatcccagctccaacagtgctgcctgaccctgcgcacggagggcaag
gagcccgacatacccctctacaagaccctgcagacagtggggccgtctcacgcgcgaacc
tacactgtggctgtgtacttcaaaggagagaggataggctgtggcaagggcccaagtatc
caacaggcggagatgggagctgctatggacgcactcgagaaatataacttccctcagatg
gctcatcagaagcgcttcatcgagcggaaatacagacaggagctgaaagagatgagacga
gagagggatcgccaggagaaggagggagacgagccagaggacagcaggaagtaa
DBGET
integrated database retrieval system
