Oncorhynchus mykiss (rainbow trout): 110535633
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Entry
110535633 CDS
T07259
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110535633 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110535633 (sox17)
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110535633 (sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
110535633
NCBI-ProteinID:
XP_021476419
Ensembl:
ENSOMYG00000037627
UniProt:
A0A8C7TIS5
LinkDB
All DBs
Position
11:36231115..36233394
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AA seq
385 aa
AA seq
DB search
MSSPDAGYASDDQTQARCAMSVMMPGMGHCQWADPLSPLGDTKVKSESCATSSGNQNRGK
TEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVSEKRPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLVHSVSEHQSMEGLGLGYHHEHGYQVST
QSLGHYRDAQALGGASYEPYSLPTPDTSPLDAVESDSMFFTGHSQEECHMMPAYAYHSQG
AEYTPQDPQSNQHANHMLHRHLSSPTEQQQGHQAGPMPPSFNQLAMYYSQHCSPSHPKRH
PGHGTGQRSPPPDSHPADQVEQMHPSELIGEVDRSEFEQYLNSSRPGDMTGLSYGAHEAN
MQGPESLISSVLSDASTVFYCNYTS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtccggatgcgggttacgccagtgacgatcagacccaggctaggtgcgcgatg
tcagtcatgatgcctggaatgggacactgtcagtgggcagaccccctgagccctctcggg
gacaccaaagtgaagagcgagtcgtgcgctaccagctccgggaaccagaaccgtggaaag
actgagccgcggatccggcgacccatgaatgcgttcatggtgtgggcaaaggatgagcgc
aagcgcctggcacaacaaaatccggacctgcacaatgcggagttgagcaaaatgttgggg
aagtcgtggaaagcccttcctgtgtccgagaagcgcccctttgtagaagaggctgaaagg
ctccgggtccagcacatgcaggaccaccctaactacaaataccgaccccggcggaggaag
caggtgaagaggattaagcgtctggactcagggttcctggttcatagtgtgtccgagcac
cagagcatggagggcctggggctgggttaccaccacgagcatggctaccaggtgtcgact
cagtcccttggccactaccgcgacgcccaggccctcgggggggcttcctacgaaccctac
agcctgcccacccccgacacctccccactggatgccgtggaatcagactccatgttcttc
accggccactctcaggaggagtgccacatgatgcctgcgtacgcctaccactcccagggg
gcagagtacacgcctcaggaccctcagtccaaccagcacgccaaccacatgctccacaga
cacctctcctcccccactgagcagcagcaaggccaccaggctggccccatgcccccctcc
ttcaaccaattggctatgtactacagccagcattgtagccccagtcaccccaagcgacac
ccaggacatgggacaggacagcgctcccctcccccagactcccacccagcggaccaggta
gagcagatgcatccatcagagctgataggtgaggtggaccggagtgagtttgaacagtac
ctgaactcctccagacctggggacatgacaggcctgtcttatggggcacatgaggccaac
atgcagggacctgagagcctgatatcctctgtgctctctgatgccagcacagtgttctac
tgtaactacacctcctaa
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integrated database retrieval system
