Oncorhynchus mykiss (rainbow trout): 110535644
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Entry
110535644 CDS
T07259
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110535644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110535644
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
110535644
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
BAR
SH3_9
PH
SH3_1
Ank_4
SH3_2
Ank_3
Ank_5
YjcZ
Ferritin_2
DUF4404
Motif
Other DBs
NCBI-GeneID:
110535644
NCBI-ProteinID:
XP_036791268
Ensembl:
ENSOMYG00000039784
LinkDB
All DBs
Position
11:complement(36832749..36910037)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSQVMRSSSSRLSSFSSKDSLWNPSRMPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCR
NTVNVLEEALDQDRTALQKVKKSVKAIYSSGQDHVQNEENYAQALDKFGSNFISRDNPDL
GTAFVKFSTLTKELSTLLKNLLQSLSHNVMFTLDSLLKGDLKGVKGDIKKPFDKAWKDYE
AKFTKIEKEKREHAKQHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGV
DLLQNLIKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKHLTALRDLIK
SSLQLDQKESRRDSQSKQGGYSMHQLQGNKEFGCEKKGYLMKKSDGLRKVWQRRKCSVKG
GMLTISHATSNRQPVKLNLLTCQVKPCAEDRKCFDLISHNRTYHFQAEDEPEFVIWISVL
SNSKEEALNMAFRGGEDGGGGGGGGEDGLEDLTKAIIDDVLRIPGNEVCCDCGAADPKWL
STNLGILTCIECSGIHREMGVHISRIQSMELDKLGTSELLLAKNVGNSSFNEIMEGNLPC
PSPKPTSSSDMTVRKEFINAKYVDHKFARKTCTSSAAKTIELCEAVKSRDLLSLIQVYAE
GVELMEPLPEGGQEAGETALHYSVRTADQTSLHLVDFLVQNSGNLDKQTEWGNTALHYCC
MYEKHECLKLLLRGKPATDITNQNGETALDVARRLKNSQCEEALLQAAAGKIYPHIHVEY
EWSLRLDEIDESDDDLDDKPSPIKKDRSPRPQSFCHASSMSPHDKLSLPGFISHRDKQQR
MSYSAFTNQMYSASTDLTSSSSPVADAPPLPPRNQGKAPHLAFLGSHSHYATLAGTRPYI
TPPSTLTPGGSSTLSKKKPPPPPPGHKRTLSDPPSPLSHSRGGLSGGSDSTPPPANKMSP
LSNKFEGIPQQQSTTSSNTKSTLGPRVLPKLPQKVALRKIDTIHPSMDKPGLPPEVLQKS
PPGPECLTKAILPDKPQLGDLLPKPQLSELPPKPGELPPKPQLANLPPKPLLGDLPPKPQ
LKDLPPKPQLSQDGHPKPGAADLPNPRPPPGELAPKPQPPDSPVANQQAETESPSPQGSE
DTNGSPACAPETPVPLPRKINTGKTKSRRVKTIYDCQADNDDELTFVEGEVIIVTGEEDG
EWWIGHIEGQTERKGAFPMSFVHILSE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtcatgagatcctcctcttcccgtctgtcaagtttctcttctaaagattct
ttatggaatccgagtaggatgccggatcaaatatcggtgtccgagtttctctcggagaca
acagaggattacaattctcccaccacgtccagcttcacgacccgcctgcagagctgtagg
aacacagtcaacgttctggaagaggctttggatcaggacaggactgcgctgcagaaggtg
aagaaatcagtcaaggccatctacagctcaggccaagaccatgtccagaatgaggagaac
tatgcccaggctctagataagtttggcagcaatttcatcagcagagacaaccctgacctg
ggaacagccttcgtcaagttctccaccctgaccaaggagctgtcgaccctgctcaagaac
ctgctccagagcctgagccataatgtgatgttcaccctggactcgctgttgaagggggac
ctgaaaggcgtgaaaggggacataaagaagccctttgacaaagcctggaaggattatgaa
gctaagtttacaaagatcgagaaggaaaagagggagcatgccaagcagcatgggatgatt
cgcacggagataacaggcgcggagatcgctgaggagatggagaaggaacgccgtctcttc
caactccagatgtgtgagtatctgatcaaagtcaatgagatcaagaccaagaagggagtg
gaccttctccagaacctaatcaagtattaccacgcacagtgcaatttcttccaagatggc
ttgaagacagcggataagctgaagcagtacattgagaagctggctgctgacctctacaat
ataaagcagacccaggatgaggagaagaaacatctgactgctctcagagatctgatcaag
tcctcccttcagctggaccagaaggagtctagaagagactcccagagtaagcagggtggc
tatagcatgcaccagctgcagggcaacaaagagtttggctgtgagaagaaaggctacctg
atgaagaagagtgatgggctgaggaaggtgtggcagaggaggaaatgttcagtgaagggt
ggcatgctcaccatctctcatgccacgtccaacaggcagcctgtgaaactcaacctgctc
acctgccaggtcaagccctgcgctgaggacaggaagtgctttgatctaatttcccacaac
cggacgtatcacttccaggctgaggatgaaccggagtttgtcatctggatctcggtgcta
tccaacagtaaggaggaggctctgaacatggcattccgtggaggagaggacggaggagga
ggaggaggaggaggagaggacggcctcgaggacctgaccaaagccatcatagatgacgtg
ctgcgcatccctggcaacgaagtctgctgtgactgtggcgctgcagatccaaaatggctg
tccactaacctaggcatcttgacctgcatcgagtgctctggtatccaccgggagatggga
gtgcacatctcacgcatccaatccatggagctagataagctaggcacctctgaactcttg
ctggccaagaacgtagggaacagtagtttcaatgaaataatggaggggaaccttccttgt
ccctcaccaaagcccacttcttcaagtgacatgacagtgaggaaggagttcatcaatgct
aagtatgtggaccacaagtttgcacggaagacctgtacctcctcggcagctaagaccatc
gagctgtgtgaggcggtcaagtccagggatctgctgtctctcatccaggtgtacgctgag
ggggtggagctaatggagcccctgcctgagggtggacaggaggccggagagactgcactc
cactactctgtgcgcaccgctgaccagacctcactgcatctagtcgacttcctcgtgcag
aacagtgggaacctggataagcagacagagtgggggaacactgctctgcactactgctgc
atgtacgagaaacatgaatgcctcaaactactgctgaggggcaaaccagccactgacatc
accaatcagaatggtgagacggcactggatgttgccaggcgactgaagaacagtcagtgt
gaggaggcactgttgcaggctgcagcgggcaagatttaccctcacatccacgtggagtat
gagtggagcctgaggcttgatgagattgacgagagcgatgacgatctggatgacaagcct
agtcccatcaagaaagaccgctctcccaggccgcagagtttctgccacgcgtccagcatg
tctcctcatgacaagctgtctctgccgggcttcatcagccaccgggacaagcagcagcgc
atgtcttacagcgccttcaccaaccagatgtactccgcctccaccgacctcacttcctct
tcctcccctgtggccgacgccccccccctgccccccaggaaccaaggcaaagcgccccat
ttggcattcctcggctctcactcgcactacgccactctggctggcactcgaccatacatc
actcctccctccaccctcacccctggaggcagctccaccctgtctaagaagaagcctccg
ccccctccccctgggcacaaacgcaccctgtctgacccgcccagcccgctctcccacagt
agagggggcttatccgggggaagtgactccacccctcctcctgcgaacaagatgtcacct
ttgtccaacaagtttgagggcattccacagcagcaaagcactacttctagcaacacaaag
tctacacttggtccaagggttctacccaaactacctcagaaagtggcactgcgtaagatc
gacaccatacacccatctatggacaaacctggcctgcctccggaggtgctccagaaatcc
cctccaggacctgaatgcctaacaaaagccatccttcccgacaagccccaactaggggac
cttctccccaaaccccagctctctgaactgccccctaaacctggagaactgccccccaag
ccccagctcgccaacctccctcccaaacccctgttaggggacctaccgcccaaaccccag
ctcaaagacctaccccccaagcctcagctctcccaagacggccatccgaaaccaggggca
gcagatctgcccaatccgagaccaccccctggagagcttgcgccgaagccccagcccccc
gactccccggtggctaatcaacaggcagagacggagagcccgtccccccagggcagcgag
gacaccaatgggagcccagcgtgtgctccagagacaccagtgcccttgccccggaagatc
aacacggggaagaccaaatctcggcgggtgaagacaatctatgactgtcaggctgacaac
gatgatgagctgacgtttgtggagggagaggtgatcatagtgacaggagaggaggacggg
gagtggtggatcggccacattgaagggcagacggaaaggaaaggggcattcccaatgtcc
tttgtccacatcttaagtgaatga
DBGET
integrated database retrieval system
