Oncorhynchus mykiss (rainbow trout): 110535649
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Entry
110535649 CDS
T07259
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110535649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110535649
03036 Chromosome and associated proteins [BR:
omy03036
]
110535649
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110535649
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110535649
PBAF complex
110535649
GBAF(ncBAF) complex
110535649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110535649
NCBI-ProteinID:
XP_021476437
Ensembl:
ENSOMYG00000041190
LinkDB
All DBs
Position
11:36947255..37051375
Genome browser
AA seq
553 aa
AA seq
DB search
MAMEDTAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYSGSPTVRPGL
PTPVMEPSRKRPAPSQQNQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVELLTSKAKRFSLPKDNILKGSRARLLVESWHRTPTTQETDGFQVKRPGDVSVR
CTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDK
YFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLK
SQMSSFLLSTANQQEIASLDNKVGQPHRKDSQSQLPKMTLKIHETIESINQLKIQRDFML
SFSRDPKGYIQDWLKSQSRDLKMMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCKIQQR
RQELEQALAVRNT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaggacacggcggggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccatctggagctaggatgccccaccagggt
gcccccatgggcccccccggccccccgtacagtgggagccctacggtgcggcccggcctg
cccaccccggtcatggagcccagccgcaagagacctgccccctcccagcagaaccagcag
cagcagaacgtacagaaccgggccagaaagaagccagtgggattccctggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattctcccacagaggatccgtgagctggtcccc
gagtcacaggcttacatggacctgctggccttcgaacgtaaactggaccagaccatcatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcccgacgctgacgactcggatggc
agtattgcatcatgggagctgcgggttgaggggaagctactggatgatcctgggaagctg
aagaggaaattctcctctttcttcaagagcctggtgattgagctggacaaagacctatac
ggtcctgacaaccaccttgtagagctgctgaccagtaaagcgaagcgattcagccttcca
aaagacaacatactcaaagggtcgagagcaaggctgctcgttgaaagttggcaccgcact
cccaccacccaggagacggacggcttccaggtgaagcggccaggggacgtgagcgtgcgc
tgcacactgctgctaatgctggactaccagcccccacagtttaaactggaccctcgtctg
gctcggctgctgggtatccacacccagacccgctcctgtatcatccaggccctgtggcag
tatgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaactgtgacaag
tactttcagcagatctttgactgcccgaggctcaagttctcggagataccccagcgtctc
accaacctcctcctgccccctgaccccatcgtcatcaaccacgtcatcagtgtggaccct
aatgaccagaagaagacggcatgctatgacattgacgtggaggtggaggaccctctgaag
agccagatgagcagcttcctgctctccaccgccaaccagcaggagatcgcctcattggac
aacaaggtgggacaaccacacaggaaggatagccaatcacaattacccaagatgacctta
aagatccatgagaccattgagtccatcaaccagttgaagatccagagggactttatgctc
agcttctccagggatcctaaaggctacatccaggactggctcaagtcccagagcagagac
ctgaagatgatgacagacgtggtggggaacccagaggaggagaggagggcggcgttttac
cacgagccctggtcccaggaggccgtcagtcgctacttctactgcaagatccagcagagg
agacaggagctggagcaggccttggccgtgaggaacacctaa
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