Oncorhynchus mykiss (rainbow trout): 110535656
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Entry
110535656 CDS
T07259
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110535656
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_14
PDZ_6
LRR_4
PDZ_2
LRR_9
LRR_LRWD1
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
110535656
NCBI-ProteinID:
XP_036791285
Ensembl:
ENSOMYG00000044572
LinkDB
All DBs
Position
11:37384483..37513335
Genome browser
AA seq
2011 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEHLD
LGSNELDVLPDTLGALPNLRELWLDRNQLSSLPLELGNLQRLVCLDVSENRLEELPSELS
GLLALTDLLLSHNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGDVPDELGGCASLNVLSLRDNRMAKLPAELADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDESTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWIDSNLNRVSVIQFQEETTKQDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEEKRNEAYISCHDGEPESPGTEEKRLSNLSNQSHDSAASNSTASANSHEERRC
VITTARESLVGGRGEQEEEELDEMEVEYVEPTVHFAEEPIYQGGNEDGEDEEGGDGVPCS
DIEEQRPQFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLAQHPTSHH
PDPEKEEEEEEECMVTPQRHNRIEEPKQEERSLLHVNSSLQPVKGVSFDQVNNLLIEPAR
IEEEEYTLTILRQTGGLGISIAGGQGSTPYKGDDEGIFISRVSEEGPAAQAGVKVGDKLL
EVNGVVLQGAEHHTAVEALRSSGAAVSMSVLREHMVEPENAITTTPLRPEDDYFPRERQA
SGLPFCIEAGSPAGFRHRLSACLVRNDKGLGFSIAGGKGSTAYRTGDMGIYISRIAEGGA
AHRDCTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGTPGCSPGL
SRARTHSPPPPEPSDSPDQEEGNDDSSLLPHGNHLSQPLEDEYPIEEVVLVKAGGPLGLS
IVGGSDHASHPFGINEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQEAVKA
LLSNKQEIRMLVRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIFIS
KVSSSGAAARDGRLLVGMRILEVSNYSLLGMTHTEAVRVLRAVGDTLVMLVCDGFDPGNA
AAVEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMVRETSQWEREEM
EKVERMRLEREEDTRLLEEKTENLGTGPLKLDYRTLAALPTTALQKVNRLSPSVSATAPM
EAPIQAQCSFTVEPLGFDLGQPPTSLFPLPHALPQSGPIMNTEAGPLYMFQHSPSPLITA
SNQGAARQEALPTGEDEEVVVLVDSQPINFTENPFLVANRRGKGCPPSERILSGPPVGYG
SAGKLQPWLFSKAPSTEPPRTDSPIRDAPYSPTTQPASIHFTPTALPAKEEISPLSPYET
RPGAIQPLSRGGGRPITSPATPDGHSSPNPFQHGPSPINSQTFLQPRAPSPDTIDEFPLN
PKQAYKAFAAVPHWLAVLEPPPQDLFGQRNNVHHNQPSPETPSPGGRDDLAQRSFRDRQK
YFEIDMKQQTPDTKPKGRVSLVGADDLKKMREEEERRFEQRAREYLMDEDDEEEDDLVKQ
MGVLKATGKVVLDGVEYKVEPVATPRRHCNTPPSYSATPPSYCGSSGPSSVDGKGDSQRI
SLEESFKLEQQRPNSMTGLIPVYPGESGAPIRTAKAERRQQERLRMQSPELAPAGDKDLS
PSEKRALEAEKRALWRAARPYGLEEDVRQYEQDLAKRLYQSRVRASQGTAPPPQSQNAAA
SSAASQLRMKSLEQDALKAQMVIAKSREGKKRGTLDQLAESPSPALTPSPTPLEDFSPQG
VTSPGRLSLSENKFDYRQFAAIPSSKPVYDIQSPDVVDDIQFIDDGSSNPVHAADPGTEV
PTATSALEMALYSNTRQLRQGCRSLETAVPT
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgttgtaaccgccacgtcgagtcagtggacaagcga
cattgtaatttgcaaaatgtccccgacgagatatttcgctacagccgcagtctggaggag
cttctcctcgacgctaaccaactccgagaactacccaagcctttcttcagacttctgaac
ctgcggaaactgggtctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaacgacattcctgagatccccgagagc
attaaattctgcaaagcattggagattgcagacttcagtggaaaccccctctccaagttg
cctgatggtttcactcagctcagagggctcgcccacctggcacttaacgacgtgtcattg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcactctctttcctggtgaaactggagcatctggac
ctgggcagcaatgaactggatgtgttgccggacacacttggtgctctccctaacctacga
gagctgtggttggaccgcaaccagctctcctctttgccactagagctggggaacctgcag
agactcgtgtgtctagacgtgtcagagaaccgactggaggagttgccctcagagctcagc
ggcctgctggccctcactgacctgctgctctcacacaacctcctggaggtggtccccgac
agcataggctctctgaagcagctgtccatcctgaaagtggaccagaaccgactgacccac
ctgagtgactccataggagagtgtgagaacctgacggaactcgtactgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagttgaagaagctgaccaacttgaatgtggac
cgcaaccggctgggcgacgtgccagatgagctgggtggttgcgccagcctcaacgtgctc
tccctcagagacaatcgcatggccaaattgcccgctgagctggctgacgccactgagctt
catgttctggatgtggcagggaacaggttacagaacctgccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggacgacgagagcaccggggagaaggtgctcacctgctacctgttgccccagcagccc
tcccctagcctggagaatctgctgcagaacagtgtggacgacagctggatagacagcaac
ctgaaccgggtgtccgttatccagttccaggaggagaccaccaagcaggatgaggacgat
gaggcggctgcagagcgcaggggtctccagcgccgggcgacgccccaccccagtgagctg
aaggtcatgaagaaggtgattgaggagaagaggaatgaggcctacatatcctgtcatgat
ggagagccagagtctcctggtactgaggagaaacgactgagcaatctgtccaatcagagc
cacgactctgcggcgtccaacagcacagcctctgccaactctcacgaggagagacggtgc
gtgattaccacagcgagagagagcctagtgggtgggcgtggtgaacaggaggaggaggag
ctagacgagatggaggtggagtatgtggagcccacggtgcactttgcagaggagcccata
taccagggtgggaatgaggacggtgaggacgaggagggtggggacggggtcccatgcagc
gacatagaggaacagaggccccagttccctacggagaagcagcgtctgatcaggaaggac
acgccgcactacaagaagcacttcaagatcaccaagctgccaaaacccgaggcggtggcc
gcgttgctgcagggcttcagccccgacgcacacctggcccaacaccccacctcgcaccac
cctgaccccgagaaggaggaagaggaagaggaggagtgtatggttactccacagcgccac
aacagaatagaagagccaaagcaggaggagaggagtctgcttcatgtcaactcttccctg
cagccggtcaagggggtgtcatttgatcaagtcaataatctcctgattgagcctgctcga
attgaggaggaagagtacaccctgaccattctacgtcaaactgggggcctgggcatcagc
atagccggaggacagggatccacaccctacaagggggatgatgagggaattttcatctcc
agggtgtctgaagagggccctgcagcgcaggctggggtcaaagtgggagacaaactccta
gaggtgaacggtgtggttctccagggggcagagcaccacacagcggtagaggccctgcgc
agctcgggcgccgccgtctccatgagcgtcctccgggagcacatggtggagccggagaac
gccatcaccaccacaccgctaaggccagaggacgactatttcccccgggagagacaggcc
agtggccttcccttctgcattgaggcaggctcccccgcaggcttccgacacaggctgtct
gcctgcctggtccgcaatgacaaaggtctcggcttcagcattgccgggggcaaaggctcc
acagcctaccgcacgggggacatggggatctacatctcgcggatcgcagagggaggggcg
gcccacagagactgcacactccgagtaggggacagggtcatcaccatcaatggcgtagac
atgaccgaggccaggcacgaccaggcagtagcgctgcttaccggcacctctcccaccatt
gctctcctggtggagcgtgaccaggccgagccgggcaccccagggtgctccccgggcctg
tcccgtgcccgcacccactcccccccacctccagagccctctgactcacccgaccaggaa
gagggcaacgacgactccagcctcttgccccacgggaaccacctgagccagccgctggag
gacgaataccccatcgaggaagtggtgttggtgaaagcgggcggccccctgggactgagc
atcgtgggaggcagtgatcacgccagtcacccgttcggcatcaacgagcctggcgtcttc
atctctaaggtgatcccccatggcttggcgtgtcagagtgggctgcgggtgggggacagg
atactggaggtgaacaccatcgacctgcgccacgccacccaccaggaggctgttaaagcc
ctgctctccaacaagcaggagatccgcatgctggtgcgcagggacccctcgcctcccggg
atggaggagatagtgatccagaagcagcctggagaaaagctgggcatcagcatccgcggc
ggtgccaagggccacgctggcaaccccttcgacgccaccgatgagggcattttcatatcc
aaggtgagctccagcggtgcggcggccagggatggccgtctgcttgtgggcatgcggatc
ttggaggtgagtaactacagcctgctgggcatgacccacacggaggctgtacgcgtgctc
cgcgccgtgggagacaccctggtcatgctggtgtgtgacggcttcgaccctggcaacgct
gccgctgtagaggcgtcaccgggcatcattgccaacccgtttgccgcaggcatcgtgcgt
aagaacagcatggagagcatctcctctatagaccgagacctgagtcccgaggagatggac
atcctacagaaggaggtggagatggtgcgagagacgtcccagtgggagagagaagagatg
gagaaggtggagcgcatgcgcttggagcgtgaggaagatactcgcctgctagaagagaag
accgagaacctgggcactgggcctctgaaactggactaccggacgctggccgcactgccc
accaccgctcttcagaaggtcaacaggttatctccttctgtcagtgcaactgcccccatg
gaggcccccattcaggcccaatgttctttcaccgtagagcccctgggttttgacttgggg
cagccccccacctccctcttccctcttccccatgctctacctcagtccggccccattatg
aacacagaggcagggcccctctacatgttccagcactctcccagtcccttgataaccgcc
tccaatcaaggagcagctagacaagaagccctgcctactggtgaagatgaggaggtggtg
gttctggtggactcccagccaatcaacttcactgagaaccccttcctggtggccaatcgc
aggggcaaggggtgccccccctctgagcgcatcctctcagggcctcctgtgggctacggg
agtgcgggcaaactgcagccctggttattcagcaaggcgccctccactgagccccccagg
acagacagtcccattagagacgccccctactcaccaaccacacaaccggcaagcattcat
ttcacccctactgcactgcctgccaaggaggaaatctcaccactgagtccctatgagaca
aggccaggtgccatccagcccctctcccgtggtggcgggcggccgatcacctctccagcc
actccggacgggcacagcagccccaatcccttccagcatggcccctcccccatcaactct
cagacctttctgcagcctcgtgccccctcccccgacacgatcgatgagttccccctgaac
cccaagcaggcatacaaggcattcgccgccgtgcctcactggctggccgtgctggagcct
cccccgcaggatctgtttggccagaggaacaacgtccaccacaatcagccttctccagag
actccatcacctggtggcagagacgacctggcgcagcgctccttcagggacagacagaag
tactttgagatcgacatgaagcagcagacgcccgacaccaagcccaaaggccgcgtgtcc
ctggttggagcagacgacctgaagaagatgagggaggaggaagagaggagattcgagcag
cgggcacgggagtacctgatggatgaagatgacgaggaggaggatgacctggtgaagcag
atgggagtgttgaaggccacgggcaaagtggtgctggacggggtggagtacaaggtggag
cctgtagccaccccccgcaggcactgtaacacgccccccagctacagcgccacaccccct
agctactgtggtagctcagggccctcgtcagtggatggtaaaggagactctcagaggatt
tccttagaggagagcttcaagctggagcagcagaggcccaactccatgactggtctgatc
ccagtgtaccctggagagtcgggggctcccatccggacagccaaggcagaacggaggcaa
caggagcggctgaggatgcagagtccagagctggccccagctggagacaaggacctctcc
ccctccgagaaacgggctctggaagccgagaagagagccttgtggagggcagcaaggccc
tatggcctagaggaggatgttaggcagtatgagcaggacctggctaagaggctctaccag
tcgcgagtgagggcgtctcagggcaccgcgccaccccctcagtcccaaaacgcagccgcc
tcttccgctgcctcccagctcaggatgaagtctctggagcaggatgctttgaaggctcag
atggtcatcgctaagtccagggagggaaagaagcgtggcacactggaccagctggccgag
tcgccctcgcccgccctcacgccatcccccacccctctggaagatttcagtccacaagga
gtaacgtcaccaggcagactgtccctgtcagaaaataagtttgactaccgacagtttgct
gccattccttcttccaaacccgtatacgacatccagtcccctgacgtggtcgatgacatt
cagttcattgacgatggctccagtaacccagtgcatgctgcggatcccgggactgaggtt
cccactgccacctcagcactggagatggccctctacagcaacacgcgccagctgaggcag
ggctgccgcagcctggagaccgccgtgcccacataa
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