Oncorhynchus mykiss (rainbow trout): 110535663
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Entry
110535663 CDS
T07259
Name
(RefSeq) cadherin-17 isoform X1
KO
K06811
cadherin 17, LI cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110535663
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110535663
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Fibulin_C
RibLong
Motif
Other DBs
NCBI-GeneID:
110535663
NCBI-ProteinID:
XP_036822878
Ensembl:
ENSOMYG00000015979
UniProt:
A0A8K9UYX7
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Position
3:complement(6299997..6325652)
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AA seq
906 aa
AA seq
DB search
MIRFNKVLHVNVELTFDQAGWGSSDHTTVEGVKRELLSKLIMAHPTMHLLLLSLLIATAA
GKGLEKGPLENKVLDIPEGTPVPYALYQFQSSHLEVDGFRLTGETEGKISISEDGWLYLE
QTLDWAHTQTHTLELEALVGSEPVEGPVIITINVLDVNNHAPSFNQTDYIGIVRERTPAG
VPFARVFATDLDDPESPNAHLSYTLVSQIPNRDNTLFFEINSNTGEISTTAEGERLLKAR
ESVIHSRGGDFSDSLKKRFDDYCTPTGDIPYELNPFYSCVQRAESRRLNPLEDPDFTLIV
RVEDMGGESVNALNGNTRVKIVVQENLWVNPGPINLREQLKGIYPMPIGKVQSNDPSAFY
RLVQKERELTFPFNVTEEGDILLTEELDREDKAMYILVVFAEDSYGNQVDPPLEVQVVVD
DVNDNAPICEEELSVFEVQENEPTGSPVGHLMVHDADDDNTPNALLSYSLVTQTPSSVFT
IDGISGRIQTKQMLQRRDATEYHLTVRVNDPGFSTECKVLIKVIDINNELPIFEMNDYGS
HNLSEDTALGHTLLTVKATDADDPGTGSSRIEFHITAGNEDGVFAMETDDNGEGRLVVAK
PLNYETASSYKLQIDARNPEPLVSGLEYGAESSAVVLVAISDVDEAPVFDMDILDVTVPE
DTKEGATLLKIDAKDPEGKEILFKMEGDTKGWLEIDPATGEIKIKNKAVLDREMVEAFQF
TVVAFEKANPELSSEREVSVRLLDVNDNVPKLTENQAFICVKKPQPIVLTALDADADPFG
APFTFSLAQGKKSPNWDLSAVDGTSAKLTLKKSPSEDKTFLIPINIKDNAGMGITQKFEV
RVCNCTELGYCFTEPGVHAGVLGMPTTIGILAGTVGFIALVLIIAFHRIKKDNQKKALLG
ETDAIL
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgattaggttcaataaagtattgcatgttaatgttgagttaacgtttgaccaggctgga
tggggcagtagtgatcacactacagtcgaaggagtgaaacgggaactcttaagtaagctc
atcatggcacatcccacaatgcacctgctgctgctcagcctcctcatcgccaccgctgct
gggaaaggcctggagaagggaccactggagaacaaggttctagacataccagaggggaca
cctgtaccctacgccctctaccagttccaatcgtcccacctcgaggttgatgggttcaga
ttgacaggagagactgaaggaaagatcagcatctcagaggacggctggctctacctggaa
cagaccctggactgggcccacacacagacacatactctggagctggaggccttagtgggt
tcagaaccagtagaaggtccagtcatcatcaccatcaacgtgttggatgtcaacaaccac
gccccgtccttcaaccagactgactacatcggcatcgtcagggaacgtacccccgcaggt
gttccatttgcgcgtgtgtttgctactgacctggacgacccagagtctcccaacgcccat
ctgagttacaccctggtctcccagatccccaacagagacaacaccttgttcttcgagatc
aacagcaacacaggagagatttctactactgccgagggagagcgtctgctgaaggccaga
gaaagtgttattcattccagaggaggggacttcagtgattctctgaagaagaggtttgat
gactactgcacccccacaggggacatcccttatgaactcaaccccttctacagctgtgtg
cagagagcagagtctcggaggctgaaccctctggaagacccagacttcacgctgattgtt
cgtgtggaggacatgggcggggagtcggtgaacgctctcaacggtaacacgagggttaaa
attgtcgtgcaggagaacctgtgggtcaatcctggaccgatcaacctcagagaacagttg
aaagggatataccccatgcccatcggcaaggtccagtctaatgatcccagtgccttctac
aggctggtacagaaagaacgggagctgacgttccccttcaatgtcacggaggaaggagac
attctgctgactgaggagctggacagagaggacaaggccatgtacatcctggtggtgttt
gctgaggatagctatggtaaccaggtagaccctcccctggaagtgcaggtggtggtggac
gatgtgaatgataacgctccaatctgtgaggaggaactcagtgtgtttgaagtgcaggag
aacgaacccacaggcagcccagtcggacatctgatggtgcatgatgctgatgatgacaac
acacccaacgcactgctctcctattcattggtgacccaaaccccttcctccgtctttacc
atcgatggcatcagcggccgcatccagaccaagcagatgctccaacgcagagatgcaaca
gagtaccacctcactgtcagagtaaacgacccaggtttcagcacagaatgtaaggtcctc
atcaaggttatcgacatcaacaatgagctgcccatcttcgagatgaatgactatggtagt
cacaacctgtctgaagacacagctctaggccacaccctcctgacagtgaaagccacagac
gctgacgaccctggaacaggaagctcccgcatcgagttccacataaccgctggcaacgaa
gatggagttttcgccatggagacagacgacaatggggagggcaggcttgttgttgctaag
cctctgaactatgagactgcttcctcctataagctacagattgatgctcgtaacccagag
ccgctggtgagcggtctcgagtacggcgctgagtcgtccgccgtggtcttggtggcgatc
agtgacgttgatgaggctccagtgtttgacatggacattctggatgtcacggtgccagag
gacaccaaggagggagctacgctgctcaaaatagacgccaaggacccagagggaaaagag
atactgttcaagatggagggagacactaagggttggttggagattgatcctgctactgga
gagataaagataaagaataaagctgtgctggacagagagatggtggaggccttccaattt
actgttgtcgccttcgagaaagccaatccagagctgtcctcagagcgcgaggtgtctgtg
aggctgctggatgtgaatgacaatgtccccaagctgacagagaaccaggccttcatctgt
gtgaagaagccccagcctatagtcctgacggccctggacgcggacgcagaccccttcgga
gcacctttcacattcagcctggcccagggcaagaagtcgcccaactgggacctaagcgct
gtggacggtacgtctgctaaactgaccctgaagaaatctcccagcgaggacaaaaccttc
ctaatccccatcaacatcaaagacaacgctggcatgggcatcacacagaagtttgaggtg
cgagtgtgtaactgcacagagctgggatactgtttcaccgagccgggcgttcatgcaggg
gtgttaggaatgcccaccaccatcggaatcctggctggaactgtcggattcatcgccctg
gtcctgatcatcgctttccatcgtataaagaaggacaaccagaagaaagccttgctggga
gaaacggacgccattctctag
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