Oncorhynchus mykiss (rainbow trout): 110535695
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Entry
110535695 CDS
T07259
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110535695
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110535695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
ERCC3_RAD25_C
CUE_1
HHH_3
T2SSK
Na_Ca_ex_C
Motif
Other DBs
NCBI-GeneID:
110535695
NCBI-ProteinID:
XP_021476547
Ensembl:
ENSOMYG00000004546
UniProt:
A0A8C7V8Q2
LinkDB
All DBs
Position
11:40787327..40815032
Genome browser
AA seq
1020 aa
AA seq
DB search
MSLFNLERFRFDKNKPTSNQDKYSGSVCPESGKENKPARVTTPVSNLGKPGRGVVFEDVI
SDSDDLASDSRSDKLTQRVTEPVKESLKQEVREMTETSDKEDKMDKDLEERLAKLQEIFP
QRDGKELLEVIKSTSTLDGAVASCLMFGDKDSTRKRKQDGSSSSQDSDVVPQPSKKRRSS
LPEDSEEGAEPSWERREAMVRKLQRKFPDQDKEELRSVLQEHEWNVDDALEVLRMFSDTD
EDSSAPEVSSSPEVKQKELNAKSNAKPSKAKSDAKPSRDRWESKDSKEEARRSNASALKW
LFKKPAPESRPNSSSSSSTSTSQKLSNGTSVAKKEASERKRKVRASYERASSSEDEDTEG
ASSEFEGEDDELDFVADDAGTSTLKGQILSFFQEASLDELSLIAGCSLKKAQKIVELRPF
AVWQDLEEVFHKENGLSAELLLGCRVVLRERAVVQGLMSKCQTISGKMVKGVTQVIDKDM
GSMTQPSVLNRKLQLKPYQLIGLKWLLLLHQHKLNGILADEMGLGKTIQAIAFLGRLHQD
GIDGPHLITVPSSTLDNWVRELKLWCPSLKVLVYYGSVEDRRYLRHDILSNQVDFNVIVS
TYNLAIGNDSDRSLFRKLRLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQN
NLLELMSLLNFIMPSMFSSSTTQIVKMFSMKSHEEQSRFERDRIAQAKLIMKPFILRRVK
SEVLKQLPAKEERLEFCTMSEKQQLLYQNMVGKLKKSAIGEKKVLCNVMMQLRKMANHPL
LHRQYYTTERLEAMSHLMLKEPTHLDADPVLIQEDMAVMSDFELHRLCQQYSSLHKYQLE
KDLLLDSGKFHLLQTLLATLKTKGDRVVLFSQFTMMLDIVEILLKHLGHRYVRLDGSTPI
ADRIVLIDDYNMDPEIFVFLLSTRAGGLGINLTSANVVIMHDIDCNPYNDKQAEDRCHRL
GQTRTVQVIKLIHKDTIEGGMLQLGQKKLKLEQDMTAAEEGDEGTMSEDMAVLLKASLGL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctttaatttagagcggtttcgttttgacaagaataaaccgacatcaaaccag
gacaaatacagcggttccgtatgtccagagtcgggaaaggagaataaaccagcccgagta
acaacacctgtatccaaccttggaaaacctgggcggggagtagtatttgaagatgtcatc
agtgactctgacgatttggcaagtgactcgagaagtgataaattaacacaaagggtgacg
gaacctgtaaaggaatcactgaagcaagaggtaagagagatgactgagacatctgataag
gaagacaaaatggacaaggatctggaagagagactggccaaactgcaggaaatcttccct
caaagagacgggaaggagctgctggaggtgattaaaagcacaagcactttggatggtgcc
gtagcctcatgcctgatgtttggtgacaaagactcaacgcgaaagaggaaacaggatggc
tccagcagttcccaagacagcgacgtggttccacagcccagtaagaagaggagatcgtct
ctgcctgaagactctgaggagggagcagagcccagctgggagagacgggaggccatggtc
aggaaactgcagaggaagttccccgaccaggataaggaggaactgaggtccgtgctccag
gaacatgagtggaatgtggatgacgccctggaggtgctgcgcatgttctcggacacagat
gaagactctagtgcacctgaagtatccagctcccctgaagtcaagcaaaaggaactgaat
gccaagagtaatgccaaaccaagcaaagcaaagagtgatgccaagccgagcagagaccgc
tgggagtctaaggatagcaaggaggaggccaggcgaagcaatgcttccgctctgaaatgg
ctgttcaagaaacctgcacctgaatctaggcctaactcctcgtcctcctcttcgacttct
accagccagaagctctccaacgggaccagcgtggctaagaaggaggcttcggagaggaag
aggaaggttcgcgcctcatacgaaagggccagcagctcggaggatgaggacacagaaggg
gccagcagtgagtttgagggcgaggacgacgagctagattttgtggcggatgacgcgggc
acatccacgctcaaaggccagatcctgagcttcttccaggaggcctcgctggatgagctg
tccctcatcgccggctgctcgttgaagaaggcccagaagattgtggagctacggcccttt
gctgtttggcaggacctggaggaggtgttccacaaagagaacggcctgtctgcagagctg
ctgctgggctgcagggtggtgctgagggagagagccgtggtccagggcctcatgtccaag
tgccagaccatctcgggcaagatggtaaagggagtcacccaggtcatagacaaggacatg
ggctccatgacccagccctcagtcctcaacagaaagttgcagttgaaaccctaccagctg
attgggctgaagtggcttctcctgctgcaccaacacaagctgaatggaatcctggctgac
gagatgggtttgggaaagaccatccaagccatagccttcctgggcagactgcaccaggac
ggcatcgacggcccccacctcatcactgtgccctcctccacccttgataactgggttcgt
gagctaaagctgtggtgccctagtctcaaggtgttagtctactacggctctgtggaggac
cggcggtacctgcgacatgacatcctcagcaatcaggtggacttcaacgtcatcgtgtcc
acctacaatctggccatcggaaacgacagcgaccgcagtctcttccgcaagctcagactg
aagtatgccgtgttcgacgagggccacatgctgaaaaacatgaactccctccgttaccgc
cacctcatggccatcaacgcggagcaccggctgctcctgaccggcacccctctgcagaac
aacctgctggagctgatgtcgctgctcaacttcatcatgccctccatgttctccagcagc
accacgcagatagtcaagatgttctccatgaaatcccacgaggaacagagtcgttttgag
agggaccgcatcgcccaggctaaactcatcatgaaacctttcatcctcagacgagttaag
agcgaggttcttaagcagctgccagcgaaggaggagaggctggaattctgcaccatgagc
gagaagcagcagctactttaccagaacatggtgggcaagctcaagaagtctgccatcgga
gagaagaaagtgctgtgcaacgtgatgatgcagttgaggaagatggccaaccaccctctg
ctccaccggcagtactacaccacagagcgactcgaggccatgagtcacctcatgctcaag
gagccgacccatttggacgcggacccggtgctgatccaggaggacatggcggtgatgtcg
gactttgagcttcaccggctgtgccagcagtactcgtcgctgcacaaataccagctggag
aaagacctactgctggactccgggaagttccacctgctccagacgctactggccacactt
aagaccaagggagaccgggtggtactcttcagtcagttcaccatgatgctggacattgtg
gagattctgcttaaacacctgggccaccgctacgtccgactggatggctccacacccata
gcagacaggattgtgctgattgacgactacaacatggacccggagatctttgtgtttctg
ctgtcgacgcgggcgggtggcctgggcatcaacctgacctcggccaacgtggtcatcatg
cacgacatcgattgtaacccctacaacgacaagcaggcagaggaccgctgccacagattg
ggccagactaggactgtccaggtgatcaagctgatccataaggacaccatagagggtggc
atgctgcagctgggccagaagaagctcaaactggagcaggacatgaccgctgccgaggag
ggtgatgagggcaccatgtctgaggatatggccgtcctcctcaaggcatcgctgggcctg
tga
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