Oncorhynchus mykiss (rainbow trout): 110535744
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Entry
110535744 CDS
T07259
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110535744
03021 Transcription machinery [BR:
omy03021
]
110535744
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
110535744
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
110535744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
110535744
NCBI-ProteinID:
XP_021476645
Ensembl:
ENSOMYG00000011605
LinkDB
All DBs
Position
11:complement(45923474..45942406)
Genome browser
AA seq
1408 aa
AA seq
DB search
MSSDELLAQREKVERQILVLERTLGPESNSIELSSDSCSSDDGSDDNASQPEDLGPPGDL
EAEREQIQREIEELECTLGPNASNAEILSDEDVQGSETESSKEDSAEELDLPQNTDTCLQ
MNLVYQEVLKEKLEELERLLSDNQHQQKEIMTQLSATGSPQATTSGQPTLKLFLGSFLKP
YFRDKVSCLGPPANPEAREKMSKRIGPTDDVKMKRWEGWQKTLLINAVMKDSMKRMIQPK
LSKVEYLTQKMVNSENVEKQILRKQIAEIEKDIEAISALKEDELMGGRYDDHDWQKISNI
DFEGIREAEPIKSFWQNYLHPSINKASWKENEIEMLKKVALKHGHHNWDLIADKLGTNRT
AFMCLQTYQRYICTDFRRRRWGGVEDEILRELVEKMRIGNYIPYTQISYFMEGRDSCQLM
YRWTQVLDPTLKKGYWSKEEDEMLLSAVAKHGAGNWWKIRQDVPGRNDGQCRDRYLGVLV
GNVKKGPFDEKEKAQLRRLVEKYGRKWSKIAAEIPNRIDCQVLHQWRKMTGYKPRERDKS
KRALQRRRKIAAVRSIKSKLMRLDDDEHSSSDEEENVEIEFMDSDDEKKQKFFEPHWSDQ
ESDIIKDYTQPDMEQWIPVLEKEFEGLGKVRSTMVERPSKNTTQEQATTDSQDAARKVTV
VRSTILDQFGKPAATVIGQNPPILAKKDYNSDLAMLKVCYGEVRNLIAWKKTNARKHKNS
GPISGDQSSRQKESSANRETFVTLNYSLQLAVTPWVGNVLMPPPHSSNKRREADMVRERA
ESIGLTNSPVFLFFLQVLSLDAEGCKQIIKMRNNQAVHLGNKSWEAKQASLKNPKQLHGP
RTVASMLNQKGNEQKRKQNSQLVMMIPQTFVIAPKVVQSIPHPAVPSTPTSRQQLMPSAL
TQLRPSTPSRPIPSTLGQPVLSTPSLPIPSTPGQLITSTPNRPILPASLSIQSSTTIDRV
NEEANENHSGKKRNRKPTAKAQALKDAAIAKKSVEESPKRKKARTKESLVVQPSNVVMSP
PQTAWVLMPIGLVPISGIGIQMTPQSLPRNALAPACPSPIIINQKVPLTLNAAATQASPN
MTYVCPSPSTPKDPSALMVSPASSVAQGTASPSVNSLSTSITITSNTALRMTNPVKRMRI
TNPVMQAVATTCPRLNAVSPIPMNTVISAPIRPQTGPPQALVFNVPPGSLPASFPQGALR
IVQLNHPKSVPPPRNPELMQFDPNLMFMEDPAQVSEWLSGKRGVALPDLGVTLPYLPPFV
SSLNTLSGLLKCKKTLAVRAMQLLPPEEKENQEEQQQVAAVRSFVAERFSHNPGYLLLKA
RFLSCFTMPALLATINPVKLSNSPTPDHGDVEEEPFRNRPVEQTDTGYEQPTTLQAPLLS
TDGKGPPATSFSGITTRNKSRYLNMDTE
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggatgaacttcttgcacagagggagaaagtcgaacgccagattttggtgctc
gagcgcacccttggtcccgaaagcaactccattgaactatcttcagacagttgttcatct
gatgatggatcagacgataatgcatctcaaccagaagatttgggtcctccgggggacctg
gaggcagagcgggagcaaatacagagagagattgaagagttggagtgcactcttggccca
aatgcatctaatgctgagattctgtcagatgaggatgtccaaggaagtgaaacagaatcg
agcaaagaggacagtgctgaggagctggatctaccccagaacacagatacatgtctgcaa
atgaaccttgtttaccaggaagtgttgaaagagaaattagaggagctggagcgactgtta
tcagacaatcaacaccaacaaaaagagattatgactcagctgtctgccacaggatctccc
caggctaccacatctggacaacccacactgaagcttttcttggggagctttctgaagccc
tatttcagagataaagtatcatgtctgggcccacctgctaatccagaagccagagagaag
atgagtaaaaggatcggacctactgacgacgtcaagatgaaaagatgggaaggctggcag
aagactctgctgataaatgctgtcatgaaagacagtatgaaacgcatgatacagcccaag
ctgtccaaggtggaatacctcacacagaaaatggtcaactctgaaaatgtggaaaagcaa
atcctgcggaaacaaatcgctgaaattgaaaaggacattgaggccatcagtgcgctgaag
gaggatgagctgatgggtggccgctatgatgaccatgattggcaaaagatttccaatatt
gattttgaaggcatccgtgaagctgaacccataaaaagcttttggcagaactacctgcat
ccctccattaacaaagccagttggaaggaaaacgaaattgagatgctcaagaaagtcgct
ttaaaacatgggcaccacaactgggatctgattgctgataaacttgggaccaacaggaca
gccttcatgtgtctccagacgtaccagcgttacatctgtaccgacttcaggaggaggagg
tggggcggcgtggaggacgagatccttcgagagctggtggagaagatgcgtatcgggaac
tacatcccgtacacccagatctcctatttcatggagggccgggattcatgccagctgatg
tatcggtggactcaggttctggaccccaccctcaaaaaaggctattggtctaaagaagaa
gatgagatgttactgagcgcagtggctaaacacggggcagggaactggtggaagatccgt
caggatgtgcctggcagaaatgatggccagtgtcgggacaggtacttgggcgtcctggtt
gggaacgtgaagaaggggccctttgacgagaaggaaaaggcacagctcagacgattggtg
gagaaatatggacgtaaatggtctaagatagctgccgagattcccaacagaattgactgc
caggtccttcatcagtggaggaaaatgaccgggtacaagcccagagagagggacaaaagt
aaaagagcattgcagcgaaggagaaagatcgcggctgtgaggagcatcaagagtaagctg
atgaggctagacgatgatgagcactcaagctccgacgaggaggagaacgtcgagattgag
tttatggacagtgacgacgagaagaaacagaagttctttgaaccgcactggtctgatcag
gaaagtgacattatcaaagactacacccaaccagacatggagcaatggatccccgtgcta
gagaaggagtttgaagggctggggaaggtgaggagcacgatggttgaacggcccagcaag
aacacaacgcaagagcaggcaacgacggacagccaggatgcggcgcgcaaggtcacagtg
gtacgttccactatcctggaccaattcggcaagcctgctgccactgtcatcggacaaaac
cccccaatcctagcaaagaaggattacaacagtgacctggccatgctgaaggtgtgctac
ggagaggtgagaaacctgatcgcttggaagaaaaccaatgccagaaaacacaaaaacagt
gggcctatcagcggtgaccagtcctcaagacaaaaggagtcctctgccaaccgtgaaacc
ttcgtcactctcaactattcccttcaattggcagtcactccctgggtgggcaatgtgctt
atgcccccaccacactcttcaaacaagcgccgtgaagcggacatggtgcgagagagagca
gagagcattggactcaccaatagcccagtgttcttgttctttctgcaggtcctcagttta
gatgcagaaggctgtaagcagatcattaaaatgcgtaacaaccaagctgtacacctggga
aacaaatcttgggaagcgaaacaggcttcattgaaaaacccaaagcaactccatggtccc
agaacagtggccagtatgctaaaccagaagggaaatgagcagaagaggaagcagaacagt
caacttgtgatgatgatcccgcagacctttgtcattgcaccgaaggtagtacagtccatc
ccacatcctgcggtcccctccactccaacttccagacaacaactcatgccttccgcactt
acccaactcagaccctctacccccagccgacctataccctccacacttggtcaacctgta
ctctctacccccagcctacccataccctccactcctggtcaacttataacctcaaccccc
aaccgacctatactccctgcttccctttccatccaatcctcaactacaatagaccgggtg
aatgaggaggctaatgagaatcattcagggaaaaaacgcaatcgtaaacctactgcgaaa
gcacaagccctcaaggatgctgcgattgctaaaaagtcagtggaagagtcacccaaacgc
aagaaagcccgtaccaaagagagcctagttgtccagccttctaacgtggttatgtccccc
ccacaaactgcctgggtcctgatgcccattggacttgtgccaatcagtggcattggcatc
cagatgacacctcagagtctaccacgaaatgctcttgcacctgcttgtccatctcctatt
attatcaaccagaaagtccctctaacactaaatgctgctgcaacacaagcctctcccaat
atgacctatgtctgcccatctccctctacccctaaagacccatctgccctcatggtatct
cctgcctcatctgtagcacagggaactgcctccccatctgtaaactctctctccacctcc
attaccatcacaagcaacactgctctaagaatgaccaacccagtaaaacgcatgagaata
actaacccagtcatgcaggctgtggcaaccacttgtcctcggctcaatgcagtttcacct
attcccatgaacacggtcatctcggctcccatcagaccgcagactggccctccacaggct
ttagtcttcaacgtccctccaggctcccttccagcctcattcccacagggagccctccga
atcgtgcagcttaaccaccctaaaagtgtccctccaccccgcaatccggagctaatgcag
tttgatcccaacctgatgttcatggaggacccggcacaagtgagcgagtggttgagcggc
aagcgaggagttgcgcttccggatttgggcgtcactctgccctacttacccccttttgtc
agcagtcttaataccctatcgggtctcctgaaatgtaaaaagacattggcagttcgtgca
atgcagctcctacccccagaggagaaagagaaccaggaagaacagcagcaggtagctgca
gtgcggagctttgtggcagagcgcttcagccataacccaggctacctgctcctgaaggct
cgcttcttgtcctgtttcaccatgcctgctcttttagctactatcaatccggtgaaactc
tccaattcccccaccccggaccatggtgatgtggaggaggaacctttcaggaaccgtcca
gtggaacagacggatactgggtatgaacagccaacaacactccaggcccctctgctaagc
acagacggaaaaggacctcctgccacctccttctctggaatcaccacaagaaataaaagt
cgctacctcaacatggacacagagtaa
DBGET
integrated database retrieval system
