Oncorhynchus mykiss (rainbow trout): 110535815
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Entry
110535815 CDS
T07259
Name
(RefSeq) low-density lipoprotein receptor-related protein 1B isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110535815
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110535815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
hEGF
Vgb_lyase
EGF_3
EGF
EGF_LRP2
DUF4520
Motif
Other DBs
NCBI-GeneID:
110535815
NCBI-ProteinID:
XP_021476796
Ensembl:
ENSOMYG00000030423
UniProt:
A0A8C7SEL4
LinkDB
All DBs
Position
11:complement(49246900..49255611)
Genome browser
AA seq
1502 aa
AA seq
DB search
MAFYLLLSISILEISVLSVAVRTPLKCNLGTKPCKDGSECILYQHVCDGEVDCRDGSDEE
DCTVTCTKGQFLCAHGKKCIDQRQVCDGVAQCQDRSDEVDCLEYMEGCAHHCDKTRCLPD
TFLCDGEEDCLDGTDEADCDSDSGGHTTPDDEVSENDSSNYKGITTMSAPAPLKCPFGMK
PCQDKTECVLYSHVCDGDADCKDGSDEETCSLECENGQFQCAHGKKCIDQRQVCDRVAQC
QDRSDEMHCLKPMEGCAHHCDNKTRCLPDTFLCDGERDCLDGTDEANCDSDSTDDHKNHR
YFVAEDYDGNNEGNATSMSAPAPLKCTFGTKPCKNNIECVLYSHVCDGEADCKDGSDERE
CSLECGSGQFQCAHGKKCIDQRQVCDRVAQCQDRSDEMHCMKPMEGCAHHCDNKTRCLPD
TFLCDGERDCLDGTDEANCADESCGSGEFRCTSGQCVSISMRCDGHPDCWDHSDEESCHK
PPQCTTNRRCPQSQECLLEEWVCDGEQDCKDGSDEENCEMVQLKCGEFQWACTSKSQCVP
KAWRCDGTKDCADDSDEAGCGQVGTCPSHQFQCASTSECLDMALVCNSVRNCADGSDEGG
DCKTTCPDKGICVQNCYSTPQGTRCGCKAGYQLDEDAVSCGDIDECVGGRQGVCSHSCVN
TPGSFHCHCNPGYLLESDGRHCKIMGEPYLLASVQTDLFLVGLRSSSLDVLVSSAKKAIL
SVDYDWRDQRVFWVSLDSESIKWSSLDQKKRGTLFKGIKSDCIAVDWVGRNLYWIDGIGG
GRIIAIGLNSTITSTLDLTVILDKEFKQLLSLALLPQKGLLFWSEISNEAKIERAGMDGS
ERRVVVSHSLSWPGSLAVDPIGERLYWTDKKLGCIGSATLDGGDVKILQLTETTNPFSVT
VFNDMLYWSDTKRGTIQGANKITGKNCKVLLKRPAQPFGLKVIHPLLQTSTDSPCEKLHC
SHLCVLAPGPKGVCKCPSGLLLAEDGLNCSNLVNSAFLLVLSPTVVTQIYLQTMLSAVGL
KTWPEHLSLPLANVNEADILDYTLRDKMLYLADSGQSSVGLFKLKETSLVPRGQFLQLKG
DTVTALALDWITLNVYWSSTKQSHLQVTSSNGEHTAVLIDDMGSLKSIALHPLSGRLCFA
KQGEGAHVECAHMDGGKRAQVWKDAVQPTSLTFSNDGGEIYWADIGAGVIGSVRVDGSGY
IEFTTGDGLIAFALSNSMLLWVTDLDTTQVWYRDDQLIKTLWFEVNTEVVSLKAYSKSSQ
MGFNFCSDGNGDCSHFCLAVPGGRTCRCAHGHRPVNATHCALDQHCPAGSRPCLDGHTCL
PLEKFCDGHPDCLDTSDENCVHLKGQSEVQSKAPTLPPSPSIPTSADLGSTTSLDNSGLV
RNLDVKQQCSKKRCNGNGECVETNGGTSCACGLGYSGDSCQDQLANTMQGPLIYGAIGLC
AAIVVISVLVAVVRRKTANARRASPVVKQTSMTDLAKHGDSPSTQHSPDDTNFSEEVASS
VA
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggctttctatctgcttctgagtatatcaattttggaaatctcagttttgagtgtagct
gtgcggactccattgaaatgcaacctgggcaccaaaccttgcaaggatggatctgagtgt
attctctaccagcatgtgtgtgacggtgaagtcgactgtagggatggctctgatgaggag
gactgcactgtcacatgcactaaaggccagtttctgtgtgcccatgggaagaagtgcatt
gaccagaggcaggtgtgtgacggggtggcccagtgtcaggaccgctctgatgaggtggac
tgcctagagtacatggagggctgtgcccaccactgtgacaagacccgctgcctccctgac
accttcctctgtgatggagaggaggactgcctggatggcactgatgaggcagactgtgat
tcagactccggtggtcacacaactcctgatgatgaagtttctgaaaatgactcaagcaac
tacaaagggattaccaccatgtctgcaccagcacccctcaaatgtccttttggcatgaaa
ccatgtcaggacaagactgagtgtgttctttacagccatgtgtgtgatggagatgcagat
tgtaaagatggctcagatgaggagacatgttcattagaatgtgaaaatggccagtttcag
tgtgcccatgggaagaagtgcattgaccagaggcaggtgtgtgaccgggtggcccagtgt
caggaccgctctgatgagatgcactgcctgaagcccatggaaggctgtgctcaccactgt
gacaacaagacccgctgcctccctgacaccttcctctgtgatggggagagggactgcctg
gacggcaccgacgaggccaactgtgattcagactccactgatgatcataaaaatcatcgc
tattttgttgctgaagattatgacggcaacaacgaagggaatgccacctcaatgtctgca
ccagcacccctcaagtgtacttttggcactaaaccatgcaagaacaatattgagtgtgtg
ctttacagccatgtgtgtgatggagaggcagattgtaaagatggctccgatgagagagaa
tgttcattagaatgtggaagtggccagtttcagtgtgcccatgggaagaagtgcattgac
cagaggcaggtgtgtgaccgggtggcccagtgtcaggaccgttctgatgagatgcactgc
atgaagcccatggaaggctgtgcccaccactgtgacaacaagacccgctgcctccctgac
accttcctctgtgatggcgagagggactgcctggacggcaccgacgaggccaactgtgct
gatgagagctgcggcagtggggagttccgttgcaccagtggtcagtgtgtatctataagc
atgcgctgcgacgggcatcctgactgttgggaccactctgacgaggagagctgccacaag
cccccccagtgcaccaccaaccgccgctgcccacaaagccaggagtgtctgctggaggag
tgggtctgtgatggggagcaggactgtaaagatggctctgatgaagagaattgcgagatg
gtccaattgaagtgtggggagttccagtgggcctgtacatcaaagagccaatgtgttccc
aaagcttggagatgtgatgggacaaaggactgtgctgatgacagtgacgaggcaggatgt
ggtcaggtgggaacatgcccctctcaccagttccagtgtgctagtacatcagagtgtttg
gacatggccctggtgtgtaactcagtcagaaattgtgctgatggttctgatgagggtggc
gactgcaaaaccacgtgtccagacaaaggcatatgtgtccaaaactgctacagcacacca
cagggaacaaggtgtgggtgtaaggctggttaccagctcgacgaggatgcagtgtcctgt
ggtgatattgatgagtgtgtaggtggtagacaaggtgtttgcagccactcatgcgtaaac
actccgggctccttccactgtcactgcaaccctggttacctgctggaatctgatggccgc
cactgcaagatcatgggtgagccttatcttctggcctctgtgcagacagacctgttcctt
gttgggctgagaagcagtagtctggatgtcctggtgtcctctgctaagaaagccatcctg
tctgtggactatgactggagggatcagagggtgttctgggtcagcctggattcagagagc
ataaagtggtcctctctagaccaaaaaaaacgaggaactcttttcaaaggcatcaaatct
gactgcattgctgttgactgggtagggagaaacctgtactggattgatggcattggaggt
ggtcggattattgctattggattaaactcaaccattacaagcactctggatctcactgtc
attcttgacaaggaatttaaacaacttctctctctggcactcctgccacagaaggggctc
ctgttctggtcggagattagtaacgaggcaaagattgagcgggccggaatggatgggtct
gagaggagagtggtggtcagtcacagcctcagctggccaggcagtctggctgtggaccca
ataggggagcggctctactggacggacaagaagcttgggtgcattggctcagccaccctg
gatggcggggacgtcaagattctgcagttgacggagaccaccaacccgttctcggtcaca
gttttcaatgacatgctctactggtcagacaccaagaggggaactattcaaggggctaat
aaaatcactggaaagaactgcaaagttctactcaaacgacctgcacaaccctttggactc
aaagtcattcatccactgctgcaaacaagcactgatagtccctgtgagaaacttcattgc
tctcacctgtgtgtattggcccccggccccaaaggggtctgcaagtgtccctctggtctg
ctcctagcagaggatggcctcaactgctccaacctggtcaactctgccttcctcttggtg
ttgtctccaacagttgtcacacagatctacctgcagaccatgctcagtgctgtgggcctg
aagacctggcctgagcacctctctctacctcttgccaatgtcaatgaggcagacattttg
gattacaccctacgagacaagatgttgtacctggctgactccggccagtcctctgtaggc
ctcttcaagctgaaggagaccagcttggtgcctcgtggccagttcctgcaacttaaaggg
gacactgtcacagccctggctctagactggataaccctcaacgtgtactggagtagcacc
aaacagtcacacctgcaggtcacctcttccaatggggaacacactgctgtgttaattgat
gatatgggaagtctgaagtccatagctcttcacccacttagtggaagactctgttttgcc
aagcagggggaaggtgctcatgtggagtgtgctcacatggacggggggaagcgagcgcag
gtttggaaggatgctgtgcagcccacctccctgactttctccaatgatggtggggagatt
tactgggctgacattggcgctggggtgatcggctctgtcagagttgatggttctggatac
attgagtttacaactggggatggcctgattgcatttgcactcagcaacagcatgctcctc
tgggtgacagaccttgacacgacccaagtttggtatagagatgaccaactgatcaagaca
ctttggtttgaggtcaacactgaagttgtcagtttgaaggcctacagcaagtccagccag
atgggcttcaacttctgctctgatgggaatggagactgcagtcacttctgtctggctgtc
cctggtggtaggacatgtaggtgtgcccatggccatcgaccagtcaatgccacacactgc
gccctagaccagcactgcccagctggtagtagaccctgtctggatgggcacacatgcctc
cccctggagaagttctgtgatgggcatcctgattgccttgacacctcagatgagaattgt
gtccatctcaaagggcagtctgaagtccagtccaaagctccaaccctgcctccaagcccc
agcattcccacgtctgcagatcttggctctaccacctctctggacaacagtgggctggtg
agaaacctggatgtcaagcagcagtgtagcaagaagcgctgtaatgggaatggggagtgt
gtggagaccaatgggggcacctcctgtgcctgtggtctaggctacagtggagactcctgc
caagaccagctcgccaacaccatgcaaggcccactaatctatggggccattggtctctgt
gctgcgattgtagttatcagtgtcctcgttgccgtggtcaggaggaagactgcaaatgca
aggcgagccagccctgtggtaaagcagaccagtatgactgacttggcgaaacatggagat
tctccctctacacaacattcacctgacgacaccaacttttcagaggaagtggcatcgtct
gtggcgtaa
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integrated database retrieval system
