Oncorhynchus mykiss (rainbow trout): 110535871
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Entry
110535871 CDS
T07259
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A isoform X1
KO
K08561
germ cell nuclear factor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110535871
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110535871
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
110535871
Nuclear receptors [BR:
omy03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
110535871
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110535871
NCBI-ProteinID:
XP_036791589
Ensembl:
ENSOMYG00000040636
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Position
11:complement(50939912..51039641)
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AA seq
499 aa
AA seq
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MEIEKRTNGFDYPERNNAKSVNGFYGDHPLEAEPNNGIDGMNDSNLDVAADPRVCLICGD
RATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGM
NRKAIREDGMPGGRNKSIGPVQITDEEIERIMSGQEFKEEASLPEHTWSNNGDSSDHSSP
SNGASEGNQPSPASTLSSNRSVEMNGGYTAALRDQYMNTPMNTPYQLLPHLFSYHAQSGL
LAPQPRSLYPQSHPLVLQLVAAEDLAPLTTPMLIEDGYKVTQVELFALLCRLADELLFRQ
ISWIKKLPFFCELSIEDYTCLLSSTWQELILLSCLTIYSAQIFGDLADVTAKYTPSEDEM
QGFSENGMEVMERLIYLFRKFHQLKVSNEEYACMKAINFLNQDIRGLTNVSQLEQLNKRY
WYVCQDYTEYKYPHQPKRFPEIMMCLPEIRFMAGKLVNVPLEQLPLLFKAVLHSCKSSLI
SYRTGSSPCLTSTGTSPGN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagatagagaagaggacgaatgggttcgattacccagagagaaacaatgcgaagtcc
gttaacggcttctacggtgaccatcccttggaagctgaaccaaataatgggatagatgga
atgaatgacagcaatcttgatgttgcagctgacccacgtgtttgcctcatctgtggagac
cgcgccacaggcctgcactatggcatcatctcctgcgagggctgcaagggcttcttcaag
cgcagcatctgcaacaagcgcgtgtaccgctgcagccgcgacaagaactgtgagatgtcg
cgcaagcagcgcaaccgctgccaatactgccgcctgctcaagtgtctacagatgggaatg
aaccgcaaagcaatcagggaagatggcatgccaggagggagaaacaaaagcattgggcct
gtacagatcacagatgaggagattgagcggatcatgtcaggacaggagtttaaggaggaa
gccagtctcccggagcacacctggagcaacaatggtgacagtagtgaccacagttcccct
agcaacggcgcctccgaaggcaaccagccatcacccgcatccactctgtcatccaatcgc
tctgtagagatgaatggcggctacacggcggctctcagggaccagtacatgaacaccccc
atgaacaccccctaccagcttctacctcacctcttcagctaccatgcccagtcaggcctg
ctggccccacagccccgcagcctctacccccagtcacaccccctggtgctgcagctagtg
gctgcagaggacctggccccactgaccacccccatgctgatagaggatgggtacaaggtg
actcaggtggagttgtttgcgctgctgtgtcgtctggccgacgagctgctgtttcgtcag
atctcgtggatcaagaaactgccgttcttctgcgagctgtccatcgaggactacacctgt
ctgctcagctccacctggcaggagctcatcctgctctcctgcctcaccatctacagtgcg
cagatctttggagacttggccgacgtcaccgccaagtacacgccctctgaggacgagatg
caggggttcagtgagaatggcatggaggtgatggagaggctgatctatctgttccgcaag
ttccaccagttgaaggtcagcaacgaggagtacgcctgcatgaaagccatcaacttcttg
aaccaagatatccgtggtctgactaacgtctcccagttggagcagctaaacaagcgctac
tggtacgtgtgtcaggactacactgagtacaagtaccctcaccagcccaaacgcttcccc
gagatcatgatgtgtctgccagagatccgtttcatggcaggcaagctggtgaatgttccc
ctggaacagctcccccttttgttcaaagcagtcttgcactcctgcaaatccagcctaatc
agctacaggacaggaagttccccctgtctgacttctacgggtacctcccctgggaactga
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