Oncorhynchus mykiss (rainbow trout): 110535889
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Entry
110535889 CDS
T07259
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110535889 (gle1)
03015 mRNA surveillance pathway
110535889 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110535889 (gle1)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110535889 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
110535889
NCBI-ProteinID:
XP_021476920
Ensembl:
ENSOMYG00000040905
LinkDB
All DBs
Position
11:51358177..51365114
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AA seq
723 aa
AA seq
DB search
MPAESLRWDTLEALKNSPKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RALQKTCSLGSASTDPGTGLSEEAPVSSTSPFPSANAQPTPLSSPQLVPRLKKDTEQQIV
GDEDSAPDASNNLSPVTNPIPSPTISLLSPRATQMEGFIRIFEEKHRAKAKMELSLRQEL
QEKLVASVASRESEQLKRFEELMELKQRQEYQSMTDMMDRETQESIGRQEKLKEEHKNRI
KILNLRLREAEQQRLREAEFERQRQVEGRERLRALNAVQEEILQLNQLLEPAAPTQSGPS
PDLTSYSTRANQLCSQVSEVVRMTAEGEFPSVEDMTVAERALHEMRSLIRVMQEAAAQAQ
EKRKKEQEEEEERRKMAMLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYQELQD
SANQCAQSFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLLSGR
SVVSGGKSVSTSQHPNGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPK
VGDFILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSGMIR
LYAAMIQLRWPYGSKQGPDPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMK
QYQVQFWKLILLIQEEYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLSSHF
WRS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaaagtttacgatgggatacattggaggccttgaaaaactcaccaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggatgtaat
gaagctcctagcttgtccccactctctgggctcatcttgaagaggcttaacatgagccct
cgagcgcttcagaagacctgctcattgggctctgcttccactgacccaggcacaggcctg
tctgaggaggccccagtctcctcaaccagccccttcccttcagccaatgctcagcccact
cccctctcttctccacaactggtccccaggttgaagaaagacacagagcagcagattgtt
ggtgatgaggacagtgccccagatgccagcaacaatctcagtccagtcaccaaccccatt
ccttctcccaccatctccctgctgtctcccagggcaactcaaatggaaggatttatacgc
atttttgaggagaaacatcgtgccaaagctaagatggagctgagtctgaggcaggagctg
caggagaagctggtggcctcagttgcgagtcgtgagtcggagcagctcaaacgctttgag
gagttgatggagctgaagcagagacaggagtaccagagtatgacggacatgatggacaga
gaaacacaagaaagcattgggcgccaagaaaagttgaaagaagagcacaagaacagaata
aagatcctgaacctgcgcctgcgggaagcggagcaacagcgtttgcgggaggcggaattt
gagaggcagagacaggtggagggtagggagagactgcgtgctctcaatgccgtccaggaa
gagatacttcaactcaatcagctcctggagccggccgcacccacccagtcaggcccctcc
cctgatctcacatcctatagcacccgtgccaaccagctatgctcccaggtgtcagaggtg
gtgcgcatgacagcggagggggagttccccagtgtggaggacatgacggtggcagagcgg
gcactgcatgagatgaggtcactgatccgggtgatgcaagaggcggctgcccaggcccag
gagaagaggaagaaggagcaggaggaggaagaggaacgcaggaagatggcaatgctgcag
gcccagcaggaagagcagaagaagagtgcagctctgtcagccaaagagaaggcacggaaa
aagggcctgcagaccaaagctgagcagagcaccctgaagtggtaccaagagctgcaggac
tccgctaaccagtgtgcacagtcttttgaaggcttgaacaacactaaggatatccagaca
aagaaactaagaatggagctccagaaggcagccacaatccctgtcagccagatctccagt
atctcaggttccaagctcagggaaatatttgacaagattgacaagctgttgtctgggaga
tcagtggtatccggagggaagtctgtctccacctcccagcatcccaacggcctggacttt
gtcagctacaaactggccgagaagtttgtgaaacaaggagaggaggaggtggcgtcccac
catgaggcagccttccccatcgctgtggtagcctctggggtgtgggagcttcaccccaaa
gtcggagacttcatccttgcccaccttcataagaaatgcccctacgccgtgccccactac
ccacctatgaaggatggcacatctgtagaggaatatcagaaaatcttaggctaccgtgtg
gaagatggaggggtggaagctcaggacagctttttgaagaggatgtcaggaatgatccgc
ctctatgctgctatgatacagctcagatggccttatggctccaagcaagggcctgaccca
catgggctgaacaacggctggcgctggctggctcagatgctgaacatggagcccctggca
gacgtcacggcaacactcctttttgacttcctagaggtctgtggcaacgccctaatgaag
cagtatcaggttcagttttggaagctcattctgctcatccaagaggaatacttgccaagg
attgaagctgtcaccagccaaggccaggcaggctcagtcacgaggctcaagcagttccta
gagagttcattaagaagcaggcagatccctccccccaaaggccagctgagctcccacttc
tggagatcctga
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integrated database retrieval system