Oncorhynchus mykiss (rainbow trout): 110535897
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Entry
110535897 CDS
T07259
Symbol
nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
omy04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110535897 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
110535897 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omy03032
]
110535897 (nbn)
03400 DNA repair and recombination proteins [BR:
omy03400
]
110535897 (nbn)
DNA replication proteins [BR:
omy03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110535897 (nbn)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110535897 (nbn)
BRCA1-C complex
110535897 (nbn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
110535897
NCBI-ProteinID:
XP_036794948
UniProt:
A0A8K9WZI2
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Position
2:complement(15634314..15650474)
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AA seq
840 aa
AA seq
DB search
MWTLNPLESGGVTHYLLPEKEYVVGRKNCEVILPNDQSISRAHAHLTATDQALTLKDSSK
YGTFVNEERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQTLH
LLGGRLTNTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTEALRQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTGKTFLFLNAKQQKRLSLAVSCGGGRSQLLE
EGSVPVSLLESPLSCVIGMAMGNSQALLSHSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQKADSESMRMKPTIPGATLSQNAPVDETVMPAASQNITAYAVNTEPS
QGISGVDVAGVSAVGETPERDQSRTTSHLNRPKPSGRELAGTCTVAETMMSSFSASDSAG
GGGSDRKKGELQHPGGGKGDAITRFLATAPRTNGGVQTMSPQNRSSQKQQVSRKCSPQKQ
SALTNFFQPVGKKRPREGKESSTVQSEAKFSRREEEKEKMKRTVPQHSETSNPTHPPTGR
SQGQHSSVAHLFPSQTEALSEGFSNPAQQGLQSRKRKEMEEDTKGSGASEIEMDELESIM
SEDMDESDEPMSASQGQRLKLTEQSSTNQGQRSQLIDKSSTNRKSLLETVDLTSANKKQR
VYSVEPIAANHRSGFDSEERLSASRRQGAEPVAEVKDEEVSFIESKPVNGVTPGHLEEPE
TDVKQEASGLGGENLPSRLIVVAFKSLTVATPARPKPRPMETHGNVNRKDFKRFRKVPVP
GAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAAEDERQNKKEETLGDDLFRYNPKPTKKR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtggacactgaaccctttagaatctggaggtgtcacccactacctcctgccagagaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcacctcactgctacagatcaggccctgaccctgaaggacagttctaag
tatggcacgtttgttaacgaggagcgtctgtctggagacacccctcgcagcctgacggca
ggggacagagtgacatttggggtctttcacagcaaattcagtgtgcagcaggtaactgtg
gtggtgtgctcgtcctgtgttgataatgaagggaaggtctctctgtctcagaccctgcat
cttctgggtggccggctgaccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcaccgaagccctgcgacagaaacaaccacctccaaaagct
gagagtttctttccagagatagacgagcccagtctgaataaggatgaggtggatctgaca
gagaggccagaacgtaaagaacttttcactggcaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgagttgtggaggtgggaggagccagctcttggag
gaggggtctgtccctgtgtcactcctggaatcaccattgagctgtgtgatcggcatggca
atgggaaactcccaagcactactgtcccactccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgcaatccctccaatcagaaggctgactcagaatcc
atgagaatgaaacccaccatccctggcgccacgctatcccagaatgcaccagtggacgag
actgtaatgccagcggcatctcagaacatcacagcctatgctgtaaacacagagccgtca
cagggcatcagtggggtggacgtggctggggtgagcgcagttggagagacccctgagagg
gaccagagccggaccacttctcatcttaaccgacccaaaccctcaggccgagagctggcc
gggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagtgctggt
ggtggcggctcggacagaaaaaagggagagctacaacatccaggtggagggaaaggtgat
gctatcaccagattcctggccacagcccctcggaccaacggaggagtgcagacgatgtct
ccacagaatcgctcctcccagaaacaacaggtctcgcggaaatgttccccccagaaacag
tctgccctcactaatttcttccagcctgttggcaagaaaagacctcgggaaggcaaggag
tcctctactgtccaatcagaggccaagttctccaggagggaagaagagaaggagaagatg
aagaggacagtaccacagcactcagagacctccaaccccacacacccccccacaggcagg
tcccagggccaacacagctcagttgcacatctgtttccaagtcagactgaggctctgtca
gaggggttctccaaccctgcccagcaggggctccaatccaggaagaggaaggagatggag
gaggacactaaagggagtggggcttcagagatagagatggatgaactggagtccatcatg
tctgaggacatggacgaatcggatgagcccatgtcagccagtcaaggccagcggttgaag
ctgacggaacagagttcaaccaatcaaggccagaggtctcaactgatagacaagagctca
accaatagaaaatcgctcctagagacagtggatcttacctctgccaataagaaacagcgg
gtttattcagtggaaccaatcgcagccaatcataggtcaggctttgattcagaagagcga
ttgtcagccagcagacgacagggagcggagcctgtagctgaggtcaaagacgaagaggtg
tctttcattgagtcaaaaccagttaatggtgtgacccctggtcatctggaagagccagag
actgatgtcaaacaggaagcctcaggtttagggggtgagaatctccccagcagacttata
gtggtggcgttcaaatccctcaccgtggcaacaccggcaagacctaaaccacgccccatg
gagacgcacggcaatgtcaacaggaaggactttaaacgcttccgcaaggtcccagttccc
ggtgcccagggtttgcccaacatcatcggcgggtcagacctgttggcccacaaccgaggc
aagaactctgagctggaggagtggctgagagacgcagcagaggatgagcgtcagaacaag
aaagaggagactttgggagatgaccttttcaggtacaaccccaaacccaccaagaaaaga
tga
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