Oncorhynchus mykiss (rainbow trout): 110535909
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Entry
110535909 CDS
T07259
Symbol
cux2b
Name
(RefSeq) homeobox protein cut-like 2 isoform X1
KO
K09313
homeobox protein cut-like
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110535909 (cux2b)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
110535909 (cux2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF3095
Motif
Other DBs
NCBI-GeneID:
110535909
NCBI-ProteinID:
XP_021476955
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All DBs
Position
11:51724488..51846901
Genome browser
AA seq
1554 aa
AA seq
DB search
MAADVGSMFQYWKKFNLRRLQRELNSIASELAGRQEESEHSHKHLVELSREFKRNVPEEV
REMVAPVLKSFQAQVVALNKRSKEAESAFLGIYKQLIEAPDPVPVLEATHTLEERLQQLQ
SSAPNSEALVREISGHWKRHLECLDKPGDTEEDPAAAESGPGEASSWTAGVMTPNSKQAL
RVTGSPQQNHQGQNQTEGEAEDTDATLADRLGEAEERIKVLHSSLSTAQTDLLDLRCKYD
QEKANKAEEVGVIMMNLEKANQKAEMAQREVERLKEQLASPRSATPGSCHPPEGTSGERG
DVLPSKLEAKLMAKDREILRLLENVQRLQFALQEVQNISANQIIELESQLAYKTEAIERL
EAKLQSQLDYEEIKTELRILKVMKLASTNGSSSQDTAEAFLRDKEAFLPSPKYLMDKARI
VHNNDEDRSEESGRESDREWGRPSGSFSSVSQVDERTSASPGPPTMDVSSSSHDLPRPFS
VSPCSRDRLSADHVVHKQLLSSPLFKKESGSPLMAFPTALYAAKVTLMSANQGPAGAGGI
EAGLPSDQSESGSSTAGDDDQLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEI
LARPKPWRKLTVKGKEPFIKMKQFLSDDQNILALRTIQVRQRGSITPRIRTPETGSDDAI
KNILEQAKKEIQSQRGGVSGTGDIKSSLGSPSGLSSNGAGGSSDDTIKNILEQARREMQA
QQQALMEMDVCGRASATSAGPQVERLGLPEPSKVLPLPTFIKQEEGGTVTVCMANPISSP
QTPLSVLSPAAFVQNIIRKVKSEIGEAGTYFDQHWSVERGPIGMVGGVGGGSSRPFTSVS
PSLSSSSSSGPSALPRPWPRLENGECLPNSEEASAAEEDTGSGMVRSVEVKVESDVSVSG
ESPGPGRGLSYYPSYLPRTLKPTVPPLTPEQYEMYMYHEVDTIELTRQVKEKLAKNGICQ
RIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQALTQLPSQSLS
RDKSPVTAQSSPSPPPSPEESHPSPLVEPVSHTLESSKENQQPDGLGLMPPHPEGGKSTP
SLLSLHQPHTPLGIQELVAMSPELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVS
DLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSTGSD
SDSPSARSECVSPALASIDLCPYSQVKKPRVVLGAEEKEALRKAYLLEPYPSQHTIEMLA
CQLNLKTNTVINWFHNYSRSRMRREVLMEGLQDNDTDTEHHSYSPSAIQSPISDGDERRL
LHPAGRTPHPIRPLSANTPLPHVKQEASEREDEGEEEERNGYIKQPKIQCFSMGVQFPQL
KTEHEDLMGGCRELHLAPHYPQSLRQEEGMSSQAQGLFQEALSLDGPQRNSQSRHEVDDS
SKSPVDPVSFKASSEPSRSSLEVSLNSPSAASSPGLMMSVSPVSSSSAPISPSLPNPPTT
STNHSLDPNPMPPIQSPKPNRSVQRRTEKIANLNNIIHRLERAANREETLEWEF
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatgtgggatcgatgtttcaatattggaagaaatttaatctacggcggctt
cagagggagctaaactcaatagcgtctgagctggcggggcgacaggaagagagcgagcac
tcccacaagcacctggtggagctgagccgggagttcaagagaaatgttccggaggaagtc
cgggagatggtggctcctgtcctcaagagtttccaagctcaggtggtcgctctgaacaag
cgcagtaaggaggcagagtcggcattcctgggaatctacaagcagcttatcgaagcccct
gacccagttcccgttcttgaggccacacacaccctggaggagaggctgcagcagctgcag
agttcagccccaaacagcgaggccctggtcagggagatcagcgggcactggaagagacac
ctggagtgccttgacaagccaggagacacagaggaggacccagcagcagcagagtcagga
cctggggaggcatcgagctggacagctggtgtgatgactccaaacagcaaacaggccctc
agagtcacaggctcacctcagcagaaccaccagggccagaaccagacagaaggggaagcc
gaagacacagatgccactctggccgacagactgggtgaggccgaggagaggatcaaagtg
ctgcattcatctctgagcacagcccagacagatcttctggacctgcggtgtaaatatgac
caggagaaggccaacaaggcggaggaggtcggtgtgatcatgatgaatcttgagaaggca
aaccagaaagcagaaatggcccagagggaggtggagaggctaaaggaacaactggccagt
ccccggagcgccaccccagggagctgccatccaccagagggcactagtggggagaggggt
gatgtgttgccatccaagctggaggctaagctgatggctaaagaccgagagatcctcagg
ctactggaaaacgtacagagactacagttcgcactacaggaagtccaaaacatctcagcc
aatcagatcattgagctggaaagccagctggcctataagacagaagctattgagagatta
gaagctaaactgcaatcccagttggactatgaagagattaaaacagaactccgtatcttg
aaggtaatgaagctggcctcaacgaatggtagctcgtcccaggacactgcagaggctttt
ttgcgggacaaagaggcctttcttccctctcccaagtacctgatggataaggccagaatc
gtacacaacaatgatgaggaccgatcggaggagtcaggcagggagtcagacagggagtgg
ggcaggccctcagggtccttctcctcagtctcccaagtggatgagcgtacctctgccagc
cctggaccccccacaatggacgtctcctcctctagccacgacctcccccgccccttctct
gtgtccccctgctcaagggacaggctgtctgcggaccacgtcgtccacaagcagctcctc
tcctccccactctttaagaaggaatccggcagccccctcatggccttccccaccgccctg
tatgcagccaaagtcaccctaatgtcagccaatcagggacctgcaggggccggcggcatc
gaggccggcctgcccagtgaccaatcggaaagcgggagctccactgcgggtgatgacgac
cagttggagacagcagagattgccttccaggtcaaagagcagctgctgaagcacaacatt
ggccagcgtgtgtttggtcactatgtgctgggcctatcacagggctcggtcagtgagata
ctggcccgacccaagccctggaggaagctgacagtgaaaggcaaggagcccttcatcaag
atgaaacagttcctgtctgacgatcagaacatcttggccctcaggaccatccaggtccga
cagagagggagcatcactcctcgcatccgaactcctgaaactgggtcagacgacgccatc
aaaaatatcttggagcaggccaagaaggagatccagtcccagagaggaggtgtgtctgga
acaggtgacattaaatcgtccctgggcagcccctccggcttgagcagtaatggggcgggc
ggcagctcagacgacaccatcaagaacatcctggagcaggccaggagggagatgcaggcg
cagcagcaggccctgatggagatggatgtctgtggtagggcctctgccaccagcgctggg
ccccaggtggagcgcctggggctccctgagccttccaaggtcctgcctttacccaccttc
atcaaacaggaggaggggggcacggtgaccgtgtgcatggccaaccccatcagcagcccc
cagacccccctcagtgtcctctcccccgccgcctttgtccagaacatcatccgtaaagtc
aagtcggagatcggtgaggcggggacttacttcgaccagcactggtctgtggagcggggg
cccataggcatggtaggtggcgtagggggcggcagctctcggcccttcacctcagtgtct
ccctccctgtcctcctcctcgtcttcgggcccctcggccctgccccggccctggccccgg
ctggagaacggagagtgtcttcccaacagtgaggaggcgtctgcagccgaggaggacact
ggctcggggatggtacggtctgtggaagtaaaagtggagtcggacgtgtcagtgagtggg
gagtcacccggccctggtcgtggtctgtcctattacccatcatacctcccccgcaccctg
aagcccaccgtgccgccgctgacgccggagcagtatgagatgtacatgtaccatgaggtg
gacaccatcgaactcacccggcaggtcaaagagaagctggccaagaacggcatctgtcag
aggatctttggtgaaaaggtgctgggtctgtctcagggcagtgtgagtgacatgctgtct
cggcccaaaccctggagcaagctgacccagaaaggcagggaacccttcatccgcatgcag
ctgtggctgctggaccagctgggccaagcactcacccagcttcccagccaaagcctctct
cgagataaaagcccagtgacggcccagtcgtcgccctccccaccccccagcccagaggag
agccaccccagcccattggtggagcccgtcagccataccctggagagcagcaaagagaac
cagcagcctgatggcctgggcctgatgcccccccacccagaaggagggaaatccaccccc
agtctgctgtccctccaccagccccacacccccctgggcatccaggagctggtggcaatg
tccccagagctggacacatacgccatcaccaagaaggtcaaggaggtgctaacagacaac
aacctaggccagcggctgtttggggagagtatactgggcctcacccagggctcagtgtca
gacctgctctccaggcccaagccctggcacaaactcagcctcaaaggcagggagcctttc
gtccgcatgcaactgtggctcaacgacccgcacaacgtggacaagctgagggacatgaag
aagatggagaagaaagcctacctgaagaggcggtatgggctgctgagtaccggctcagac
agtgactctcccagtgcccgctctgagtgtgtgagcccagctctggcctcaatagacctg
tgtccctacagtcaggtgaagaagcccagggtggtgctaggggcggaggagaaggaggct
ctgaggaaggcctacctcctggagccatacccctcccagcacaccattgagatgctggcc
tgccagctcaacctcaaaaccaataccgtcatcaactggttccacaactacagcaggtcc
aggatgcgacgggaggtcctcatggagggtctccaggacaacgacacagacacagaacac
cacagctactctccctcggccatacagagccccatctcagacggagatgagaggaggctg
ctgcaccccgctggacgcaccccccaccccatccgccccctcagcgccaacacaccactg
cctcatgtcaaacaggaggccagtgagcgggaggacgagggagaggaggaggagaggaat
ggctacatcaaacagcctaagatccagtgtttctctatgggtgtccagttccctcagttg
aaaacggagcatgaggacctgatgggtggctgccgagagctccacctggctccacactat
cctcagagcctgaggcaggaagagggtatgagcagccaggctcaggggctcttccaggag
gcgctctccctagatggtccccagagaaacagccagtccaggcacgaggttgacgactcc
agcaagtctcccgtggacccggtcagcttcaaggcctcgtctgagccctcccgcagcagc
ctggaggtctcactcaactccccctccgctgcctcttcgcccggcctcatgatgtccgtc
tcccctgtctcatcttcctctgcacccatctccccatccctgcccaacccacccacgaca
agcaccaaccacagcctggaccctaatcccatgcctcccatccagagccccaagcccaac
aggagcgttcagagacgcaccgagaaaattgccaacctcaacaacatcatccacaggctg
gagagagcggctaaccgggaggagaccctggagtgggagttttag
DBGET
integrated database retrieval system
