KEGG   Oncorhynchus mykiss (rainbow trout): 110535938
Entry
110535938         CDS       T07259                                 
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110535938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110535938
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110535938
 Complex B
    110535938
 Complex C
   U2 SnRNP specific factors
    110535938
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 110535938
NCBI-ProteinID: XP_021477007
Ensembl: ENSOMYG00000005733
UniProt: A0A8C7NRE6
LinkDB
Position
11:complement(52605772..52620232)
AA seq 790 aa
MPPGPVQLVQLEPNSKADEPTGETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQQALLNSQQLP
QKVQAQVIHETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKE
QRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLMKLKREAENPREVLDQVRYRVEW
AKFQERERKKEEEEREKERVSYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARIL
TQERYDKFGESEEVEMEVESEDEDDVEQEDRDDGRPTQPDQDTQLQDMDEGSDEEDDGKA
PLPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPPAKTLDEFLISPITGERIQASKMQEH
MRIGLLDPRWLEQRDRGIRERQIEDEVYAPGMDIESSLKQLAERRTDIFGVEETAIGKKI
GEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDESKEKIGPS
KPELYHHHHQSPLISSAPLLPKPSPPMNTMARAPPSMLPPVRTTLLSAVPVIPRPPMAPV
QMRLAPGQVLTPMPPMMHAPRINVVPMPQPPHMMAPRPPPMVVPTAFVPAPPVPQPPRPR
PDPQPPSQPPPPHNDEPASKKMKTEDNLMPEEEFLRRYKGSVSVTVQVPNMQDKTEWKLS
GQALNFTIPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNINNGSVIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtacaacttgttcagcttgagcccaacagcaaggcagatgagcct
acaggggaaaccccagcaacgaaacccatagttgggatcatctatccacctcctgaggtc
cgaaacatcgttgataagactgccagctttgttgccaggaatggaccagagttcgaagca
aggatccgtcagaatgagatcaacaacccaaagttcaacttcctgaaccctaatgacccc
taccatgcttactatcgccacaaggtcaatgaattcaaggagggcaagggccaggagccg
tctgcggccgtgccaaaggtcatgcagcagcaggccctgctgaactcgcagcagcttcct
caaaaggtgcaggcccaggtgattcatgagacagtggtgccaaaggaacctccgcctgag
tttgagttcattgcggaccctccttcaatctcggcattcgacctggatgttgtcaagctg
accgcccagtttgtggctcgcaacgggcgccagttcctcacacagctcatgcagaaagaa
cagcgaaattaccagtttgacttcctgcgacctcaacacagcctcttcaactacttcacc
aagctggtggagcagtacactaagattctgatccctcccaagggactgctcatgaagctg
aaaagagaggctgagaaccccagggaggtgctggaccaggtgaggtaccgcgttgagtgg
gcgaaatttcaggagcgtgaaaggaagaaagaggaggaggagcgggagaaagagcgtgtg
tcctacgcccaaattgactggcatgactttgtagtggtggagaccgtggacttccaacct
aatgagcaaggccactttcccccacccaccacacctgaggagctgggagctcgcatcctg
acccaggagcgttatgacaagtttggagagagtgaggaggtggagatggaggttgaaagt
gaggacgaggatgacgttgagcaggaggatcgggatgatgggcgtcccacacagcctgat
caggacacacagctgcaagacatggatgagggttctgatgaagaggatgatggcaaggca
ccattgcccccagacaaccccatgccacccccactgccccctactccagaccaggtcatt
atccgcaaggactacgaccccaaagcctccaagccccagcctccagccaagactctggat
gagttcctcatctctcccatcaccggtgagaggatccaagccagtaagatgcaggagcac
atgcgcatcggactattggatccccgctggctggagcagagggaccgcggcatcagagag
aggcaaatagaggatgaggtttacgcccctggcatggacattgagagcagcctaaaacag
ctggctgagaggcgtactgatatctttggtgtggaggagaccgccatcggtaagaagatt
ggagaagaggagatccagaagcctgaggagaaggtgacctgggatgggcactctggcagc
atggcgcgtactcagcaggcagcacaggccaacatcaccctacaagagcagattgaggcc
attcacaaggccaagggactggtgcaggaggatgaaagcaaagagaagattgggccaagc
aagcctgagctttaccatcatcatcatcaatcacccctcatctcctctgccccccttctg
cccaaacccagccctccaatgaacacgatggcacgggcccctccttccatgctgccccct
gtacgcaccactctcctgtcagctgtgcctgtgattccacggccccccatggcccctgtg
cagatgcgcctagccccagggcaggttctaacacccatgccccccatgatgcatgctccc
cgcatcaacgtggtgcccatgccccaaccacctcacatgatggcccccagaccaccaccc
atggtggtcccaactgcatttgtccctgcccctccagtcccgcaacccccccgcccccgc
cctgacccgcagccaccttcccagccacctccaccccataatgatgagcctgccagcaag
aagatgaagacagaggacaacctcatgccagaggaggagttcctccgtagatacaagggt
tcagtgtccgtcacagtgcaagttcccaacatgcaggacaagactgaatggaagctaagt
ggacaagcgctcaatttcactatcccactcacagatcaggtgtctgttattaaagtgaaa
atccatgaagccactggaatgccagccggaaagcaaaagctgcagtatgagggaattttc
atcaaagattccaactcgctggcctactacaacataaacaacggttcagtcatacacctg
gcactgaaggagagaggtgggagaaagaagtga

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