Oncorhynchus mykiss (rainbow trout): 110535958
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Entry
110535958 CDS
T07259
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110535958 (adamts13)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
110535958 (adamts13)
Peptidases and inhibitors [BR:
omy01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
110535958 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_4
Reprolysin_3
Reprolysin_5
TSP1_spondin
TSP1_CCN
Reprolysin_2
Peptidase_M10
DUF6055
Motif
Other DBs
NCBI-GeneID:
110535958
NCBI-ProteinID:
XP_036791685
Ensembl:
ENSOMYG00000016378
UniProt:
A0A8C7QCI8
LinkDB
All DBs
Position
11:complement(54082834..54096962)
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AA seq
1555 aa
AA seq
DB search
MAALALLCLLSVLPGSTAILMRSPLEELFLHSLDQKDMVFYFGTDSATSVPEFQLIWTDC
ASTELHTGPWRCSFETEGKRFVLGLGERKQSFSCQSRLETARNTTLNTRRKSHAMCCQQA
KVLHPPSTKGFLTICARKMQGLVVAGKEKERLYIQPVLQKHIHLTEVRNCSSPGTPHLVF
HQPFTARGPPRHSHMKRLRRRRSAIMPEVTHLELLVVVAPDVQLVHRQDTERYILTNLNI
ASELLRDMTLGANMRVHLVRMIILSEPEPEINISTNISSSLTSVCEWARRVIPSNDTDPL
HADLVLYITRFDLELPNGNKQVRGVTQLGGACSSQWSCVITEDTGFDLGITIAHEIGHSF
GINHDGIGNTCSSSGFMMASDGGYNSVDLTWSQCSRQQLYTFFSEGKADCVKDLPVLVGS
LQDWKPGLYYGVDDQCRIAFGSTARACSFTNTDLPVCRVLSCHIKPDDNSSCKRLLVPLL
DGTECAPNQWCLKGRCVSPDQLSSSSSVVVHGSWSSWSQFSPCSRICGGGVTSRTRQCNN
PRPAFGGNDCKGRDTEAELCHQQQCERTQLAFMAEQCAQTDLQPLYLSPNTASLYTWIPA
VGFVTGDEQCRYMCQCKGENFIVSRGSQFVDGTRCEPDSPAPLGATTACLGGTCQLFGCD
GVLKSGKVEDVCGVCGGDGSSCSLTSQSYSGGQAREYVTFLTLPVNATQVHIVNRAPVFT
HLAVLIGNQYVVSGSGSIALNITHPSPLEDGRLVYRLYLTPDLLPLMEELLLPGTVTEET
HVQVYRKYGKEYGEQTSPNITYHFYTPMSNNAFIKEIPRGKWTVVTTSCSVTCGSGIQKS
MYVCMDEDTKEHLEEVYCNSAPLLLLQQTTCHLPACPPSWEMGEFGPCSALCGGGEKVRP
VRCVQRQGADVLQVAVSECPQHSATQSVDTCNFQPCPARWNASEAGECSAVCGPGAAKRV
VTCVRSEGGHDVEVDHSLCSGLFKPPVLVSCVIDVCPIGWESKGQDQPILNKSPGLRYRS
RYLTVYVWSPVIGQCSKTCGNGTLQVWFSCLDHQTRLAVPEVYCDASSKPEPHTESCNPS
PCPPMWRYKQGVCSVSCGGGVAHRVLYCSQETEGDEEVVVNNTECSNMTKPIAVVTCNSN
SCPARWRVLRTGACTTSCDLGLARRHVSCVEYIHGEDSEVSEERCHAAVKPATTVPCLVQ
VCTFRWDVKDWNQCSVPCGYGIQSRAVSCMGPTKPEPLSPLLCMHMPKPITIRGCQMDDC
RVLEKTSALTHTHTTNTPSLETRDQLPSPQGMEVTSMDEEPLLSPTLSLTQTPPTATEPT
TPQTTTAMPTVTPKTSLCGQLLLEESGTVDLRHETGRCILSIGRPLDEVIHMKVESSSLS
CKKREYVAFYDRLVLVRKCDQLEDTELTSRTNVLLVRQHLLSPGNGVLLTYSSQKNNKKS
HHQDCDVQLFAPSGVIENPAMTSELGSHTCRVLINAPPSVKIRIRALSMGPVVNSTAAQS
TFIMIRDVDVLKTNVFKGQQLFEWRSAGNMAEIEFHGEYLHSNGSFRAEYSFVEP
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttggcgctgctctgtctgctgtcagtgctgccaggctccacagcaatacta
atgagatctccactggaggagctatttctgcactccctggatcaaaaggacatggtgttt
tattttggtactgactctgctacttcagtgccggagtttcagctcatctggacagactgt
gcctctacggagctgcacactggcccctggcgatgctccttcgagaccgaagggaagcgc
tttgtgctggggctcggagagaggaagcagtccttctcctgtcagtccagattagagaca
gcgcggaacaccactctcaacaccagaaggaaaagtcatgccatgtgttgtcagcaggcc
aaagttctacatcccccttcaactaaaggatttctcaccatctgtgccaggaaaatgcaa
ggcctggttgttgcaggtaaagagaaggagagactatacattcagccagtgcttcaaaaa
cacattcatctgactgaagtcagaaactgttccagtccaggaacacctcatctggtgttc
caccagccatttactgccagaggcccccccagacactctcacatgaagaggctgcgtcgc
cgaaggtcagccataatgcctgaggtgacccacctggagctgctagtggtggtggcgcct
gacgtgcagcttgtccacaggcaggacacagagagatacatacttaccaacctcaacatt
gcctcagagctgctgagggacatgacactgggagccaacatgagagtgcatctggtccgc
atgatcatcctctcagaaccagagccagagattaacatctccaccaacatctcctcgtct
ctgacgagtgtgtgtgagtgggccagaagggtcatcccctctaatgacactgaccccctg
catgctgaccttgtgttatacatcacaagatttgatctggagctgcccaatgggaacaag
caggtgaggggcgtgacccagctaggcggggcatgttctagccaatggagttgtgtaatc
acagaggacacaggctttgatctgggcatcaccatcgctcatgagataggccacagcttt
ggtataaaccatgatgggattggtaacacatgcagcagcagtggctttatgatggcctct
gatggaggctacaacagtgtggatctcacctggtcccagtgcagcagacagcagctgtac
acattcttcagtgaaggcaaggctgactgtgtgaaagacttgcctgtcctggttggctct
ctgcaagactggaagccaggcctttactatggtgtggacgaccagtgccggatagcgttt
ggtagcaccgccagggcctgctccttcaccaacactgacctgcctgtgtgccgtgttctc
tcctgccacatcaaacctgatgacaacagctcatgtaaacgtctgctggtgcctctgttg
gatgggacagagtgtgcacccaaccagtggtgcctgaagggccgctgtgtgtccccagac
caactcagctcctcttcctctgtggtggtgcacgggtcctggtccagctggtcccagttc
tccccatgctcacggatatgtggcgggggcgtcacttcccggaccaggcaatgcaataac
ccacgacctgcatttggtgggaatgattgcaagggcagggatacagaggcggaactttgt
caccagcagcagtgtgaaaggacccagctggccttcatggcagagcagtgcgcccagaca
gatctacagcccctgtacctgtcccccaacacggcctccctctacacctggatccctgct
gtaggctttgtcacaggggatgaacagtgcaggtacatgtgccagtgtaagggagagaac
ttcattgtgagccgtgggtctcagtttgtggatgggactcgttgtgaaccagacagtcca
gctccccttggtgccacgacagcttgtctaggagggacgtgccagctgtttggctgtgat
ggagtgttgaagtctgggaaggtggaggatgtgtgtggggtatgtggaggggatggctcc
tcttgcagtctcacctctcagtcttacagtggtggtcaggccagagagtacgtcacattc
ctgaccctgccagtaaacgccactcaggttcacattgtcaacagggcacccgtcttcact
cacctggcggtgttgattgggaatcagtatgttgtgtctgggagtggcagtattgcgtta
aacatcactcacccctctcctctggaggacggtcgtctggtttatcgtctgtacctgacc
cctgacctcctgcctctcatggaggagctgctgctgcctggaactgttacagaggagaca
cacgttcaggtctatcggaaatatggaaaagaatatggagaacaaaccagtccaaacatc
acctaccacttttatactcccatgagtaataatgcttttataaaagagatacccaggggc
aagtggactgttgtcacaacatcctgctctgtcacctgtggatctggcatacagaaatct
atgtatgtctgtatggatgaagacaccaaggagcatctggaggaggtctactgtaattca
gctccccttctcctgcttcagcagacaacctgtcacctcccagcctgtccccccagctgg
gagatgggggagtttgggccctgcagtgccttgtgtggtggtggagagaaagtgcgccct
gtgagatgtgttcaaaggcaaggagcagatgtcctacaggtggccgtttctgaatgtcca
caacactcagccacacaatcagtggatacatgcaactttcaaccctgccctgcaaggtgg
aatgcgtcagaagccggggagtgttcagcggtgtgtgggcccggagcggccaaacgcgtt
gtgacatgtgtgcggtccgaaggtggtcatgatgttgaggtggaccatagcttgtgttca
gggctcttcaaaccacctgtcttagtgtcttgtgtgatcgatgtctgccctattggctgg
gagtctaagggacaggatcaacctatacttaacaaatcccctggtttaaggtaccgctcc
aggtacctaacagtgtatgtttggagccctgtgataggccaatgctcaaagacctgcgga
aatggtaccctgcaggtgtggttttcatgtctggaccaccagaccaggctagcggtgcct
gaggtctactgtgatgcctccagcaaaccagagcctcacacagagtcctgcaacccttcc
ccttgccctcccatgtggcgctacaagcagggagtgtgcagtgtgtcgtgtggaggaggc
gtggcccatagggtgctatactgctcccaggagacagagggagatgaggaggtggttgtg
aacaatacagagtgcagtaacatgaccaaacccatagcagtggtcacatgcaactccaac
agctgtccagccaggtggagagtgctgaggacgggggcctgtactacgtcttgtgatctg
gggttagccaggaggcatgtctcctgtgttgagtatatccatggggaggacagtgaggtg
tctgaggagagatgccatgcagccgttaaacctgctaccacggtaccctgtctggtgcag
gtgtgcaccttcagatgggacgtgaaagactggaaccagtgttcagtgccgtgtgggtat
gggatccagtctagagcagtgtcctgcatgggacccactaagcctgagcccctcagccca
ctgctctgcatgcacatgcccaagcccatcaccatccggggctgccagatggacgactgc
agggtcttagagaagactagtgccctcacccacacacacaccaccaacaccccctcacta
gagaccagggaccagttacccagtccccagggcatggaagtcacttccatggatgaggag
ccactcctgtctcctactctcagcctgacccagacacccccgactgcaacagaaccgacc
accccacagaccaccacagccatgcccactgtgacacctaaaaccagtctgtgtgggcag
cttctgctggaggagtcaggcacagtggacttgagacatgagacaggtcgctgcatcctg
tcaataggccggcccctggatgaggtcatccacatgaaagtagagtccagctccctaagc
tgcaagaaaagggagtatgtggcgttctatgacaggctggtactggtcagaaagtgtgac
cagcttgaggacactgaactgacctccaggaccaacgtcctgctggtgcgccagcatctc
ttgtcccccggaaacggagtgctgctgacttacagcagtcagaagaacaacaagaagagt
caccaccaggactgtgatgtccagctgtttgctcccagcggggtcattgagaatccagcg
atgacctcagagttgggcagtcacacctgtcgagtcctcatcaacgcccctccctcagtg
aagattaggatccgggctctgagcatgggccctgtggtcaacagcacagcagcccagtcc
accttcattatgatacgagatgtagacgtcttgaagaccaacgtgttcaagggccaacag
ctttttgaatggcgatcagctggaaacatggcagagatagagtttcatggcgagtacctg
catagcaatgggagcttccgagctgaatactcattcgtggagccttga
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integrated database retrieval system
