Oncorhynchus mykiss (rainbow trout): 110535971
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Entry
110535971 CDS
T07259
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110535971
Membrane trafficking [BR:
omy04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110535971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
110535971
NCBI-ProteinID:
XP_036791696
Ensembl:
ENSOMYG00000017662
UniProt:
A0A8K9XFC6
LinkDB
All DBs
Position
11:complement(54909625..54940662)
Genome browser
AA seq
1475 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLLASCLVAGERL
NQEHTQGVIYTVFTSLYGNCIMQEDERYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGS
EGYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDGDP
RRKNSLAKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFV
RSVMAGDHLREEEHMLLETMLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRNIG
QQLATSWDSTTTTLSAHIPLVTPFAASRSRSRSELAQQGVAEASSLESLQEVMPEEVLVI
SLGSSPQTIPGMMSENEVLTMQLTDGSQGDTPADDTKHHGKPDKTLRFSLCSDNLEGISE
GPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRD
MMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGATVENMLGSLLCLPGSSSV
LLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTEVREVSS
RPSTPGLSVISATSEDRGKTEDLRSECSSDFGGKDSVTSPDGEESSHGAHHSLASPASQA
DSLLAMFDPLSSGEGFSTGTIVRPKVHYARPLHPPPDPPIPETCALGQEPRYSLFTPHCL
VQAELEHTKQRHSYPDRLVRSRSSDIVCQGRRPTSDPGLNRRAAAEERDPAGHFSMGPSS
SPSKDSLKGEVEERKDSDEEKSDRNRPWWKKRFQSAIPKVLYWTAESEVPAPIAFRKRDR
QEKDDVGHERVPQDDTLSRNSQAQAAEDILDKYRNIKRTSPSEGATAAAYDTTGELCGEE
GLHDEALQNMSTDDLPDSASQTAQQHDSSKFSFSDAKKKLRLALCSADSVAFPLMAPATT
RNGLPDHTDSEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFDARTCRKLLAAI
AEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMEA
KSLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMAHDAIWQYASEDQLQDAQMAIERSVMN
RIFKLAFYPNQDGDILRDQLLQEHIARLSKVVTANHKALQIPEVYAREAPWPSAQSEIRT
ISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTIQ
YINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtatgtg
gcttcagagaagcagctgatccaacggctcaacggggacgtgctgaagactgctgagagg
ctgtaccgtgctgcctggatcaccaaacagcagaggatcaacctcgaccggctcattctc
accagtgctgaggcctccccggccgaatgctgccaacatgccaaagtgctggaggacacg
cagttcctggacggctacaagactctgggctttcaggagagcatctatggggagttcctg
ggtcgggtgcgcgagaaccctcggctgttggcctcctgcctggtggctggggagaggctg
aaccaggagcacacacagggagtcatttacacggtcttcacctccctctacggtaactgt
atcatgcaggaggatgagcgctacctgctgcaggtcctccgctacttggtggagtttgag
ctgaaggagagcgacaaccctcggcggctgctgcggcggggcacgtgcgccttcagcatc
ctcttcaagctcttctccgaggggctgtactcggccaagcttttcctcaccgccaccctc
cacgagcccatcatgcagctgctggtggaggacgaggaccacctggagacggacccctcc
aaggtgacggagcgcttcacgccggcccagcaggagcgcctgtttggggagaagggctcg
gagggctacagacagaaggtggcagctgccgtggaagccaacgaggccaagctggtgacc
ctggtcaacaagttcatcggctacctgaagcagaacacctactgcttcccccacaacctg
cgctggatagtgtctcagatgtacaagacgctatcgtgtgtggaacggctggaggtgggt
gaggtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtc
aaccctgagcagtacggcatcatctcagacgcccctatcaacgaggtggctcgtttcaac
ctcatgcaggtagggcagcttcttcaacagttggcaatggctgacgatgatggagacccc
cggaggaaaaacagtttggccaagttcgataagagctgtgtagctgccttcttggatgtg
gtaatcggagggagagctgtggagacaccgcccatgtcctccatgaacctactagaagga
ctcagcaggactgtggcgtacatgacacacagtcagctcctctgcctggtggactttgta
cggagtgtgatggcaggggaccacctccgggaggaggagcacatgctcctggagaccatg
ctggccaacgttccccagtcccgcacggtgaagagcaacagtctggagctcaccccctcc
aacacaccccagctatccccagccaccacccccgccaacaaaaaaaacaggaacatagga
caacagttagcaacttcctgggactccacaaccaccaccctgtctgctcacattccatta
gttaccccttttgcagcctcccgcagtcgtagccgttccgagctggcccagcaaggggtg
gcagaggctagctctctggagtccctgcaggaggttatgccagaggaggtgctggtgatc
tcactaggaagcagcccgcagaccatccctgggatgatgtcagagaatgaggtgttgacc
atgcagctgactgatgggtcacaaggggacactcctgcagatgacaccaagcaccatggc
aagccagacaaaaccctacgcttctccctctgcagtgacaacctggagggcatctcagag
ggtccgtccaaccggtctaactccgtgtcatctctggacctggagggagagtctgtgtct
gagctgggagctgggccatcagggagcaatggggtggaggctctacaactgctggagcat
gaacatgccaccactcaggacaacctggatgacaaactgcgtaagtttgagatccgcgac
atgatgggcctaacagatgaccgggacatctctgagacagtgagtgagacctggagcaca
gacgtgctgggcagcgactttgaccccaacatggatgaggatcgactgcaggaaatagct
ggggcgactgttgagaacatgctgggcagcctgctgtgcctaccaggctccagctcagtg
ctgctagacccttatggatccaccatctcagagaccaccagcgaggcctggagtgtggag
gtcctgcccagcgactcagaagccccagatctgaagcaggaagagcgtctacaggagttg
gagagctgctcagggctgggcagcacctccgatgacacagaggtcagagaggtcagctcc
cggcccagcaccccagggctcagcgtcatctcagcgacatcagaagatagaggcaagacg
gaggacctgcggtcggagtgcagctcggactttggggggaaggactctgtgaccagtcca
gatggggaggagtcgtcccacggagcacaccacagtttggcttctccggcctcgcaggca
gactccttactggccatgttcgatcccctatcctccggggaaggtttctctactggtacc
atcgtgaggcccaaagtgcactacgccaggccccttcatcctccccctgaccctcccatc
ccagagacctgtgccctgggccaggagccccgctactccctgttcacgccccactgcctg
gtccaagccgagctggagcacaccaagcagcgccactcctacccagacaggctggtacgc
agtcgcagctctgacattgtctgccaaggccgccggcctaccagcgacccgggcctcaac
cgcagagcggcagccgaggagcgggatcctgccgggcacttctccatggggccgtcctcg
tcccccagcaaggattccctaaaaggagaggttgaggagagaaaggacagtgatgaggaa
aagtctgatcgcaacagaccatggtggaagaaacgctttcagtcagccattcccaaagtg
ctgtattggacggctgagagtgaagtcccagctccgatagccttccggaaaagggacagg
caggagaaagacgatgtgggccatgaacgcgtcccacaagatgacactctgtccaggaac
tcccaggcccaggcagcagaagacatcctggacaaatacaggaacatcaagaggaccagc
cctagtgaaggagccaccgctgcagcctatgacactacaggagagctgtgtggagaggag
ggtttacacgacgaagctctgcagaacatgtccacagacgacctgccagactcagccagc
cagacagcccagcaacacgactccagcaagttctcattcagtgatgcaaagaagaagttg
agactggccttgtgttcagcagactctgtggctttccccctcatggctcctgccaccaca
cgcaatgggctgccagaccacacagactctgaagacaatgagatcgtgtgcttcctgaag
gtccagctggcggaggccatcaacctgcaggataagaaccagatggcccagatccaggag
accactcgctgcgtcagccgcttcgacgcacgtacctgcaggaagctgctggcagccatc
gccgaggattacaggaagcgggcgccctacatagcttatctgacgcggtgtcgacaaggc
ctgcagacgtcccaggcccacctggagcggctgctgcagcgggtgctgagggacaaggag
gtggctaaccgctacttcaccacagtatgtgttcgcctcctactggaacacatggaggcg
aagtccctggacttcatcaaagccttccaggggtgcacagcgtcagacgacaagacggcg
gcggtggaggacttcctgcgctacctgtacggggccatggcccatgatgccatctggcag
tacgccagcgaggaccagctgcaggatgcccagatggccatagagcgcagcgtcatgaac
cgcatcttcaagctggccttctaccccaaccaggacggggacatcctgagagaccagctt
ctacaggaacacatagcgcgtctctcaaaggtggtgacggcaaatcacaaagctcttcaa
atcccagaggtgtatgcgagggaggctccctggccgtctgcccagtcagagatccggacc
atcagtgcctacaagactcctcgggacaaagtgcagtgtatcctgcgcatgtgttccacc
atcatgaacctcctgagtctggccaacgaggactctgtccctggagctgacgacttcgtc
cctgtgcttgtctttgtcctgataaaggcaaacccgccctgcctgctgtccactattcag
tacatcaataatttctacgccagccggctgagtggggaggagtgctattggtggatgcag
ttcaccgcggcagtggaattcattaagaccatcgatgatcgcaagtga
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integrated database retrieval system
