KEGG   Oncorhynchus mykiss (rainbow trout): 110535977
Entry
110535977         CDS       T07259                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1-A isoform X1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omy03036]
    110535977
   03400 DNA repair and recombination proteins [BR:omy03400]
    110535977
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110535977
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110535977
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML eIF2A NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_HPS5 B-prop_COPA_B_2nd Beta-prop_DCAF12 Beta-prop_ELP1_1st RMC1_N
Other DBs
NCBI-GeneID: 110535977
NCBI-ProteinID: XP_021477086
Ensembl: ENSOMYG00000018702
LinkDB
Position
11:complement(55070446..55072756)
AA seq 332 aa
MKDTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGH
QRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE
DDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQGTDTAWKCVC
TLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQD
VNCIAWNPKEAGLLVSCSDNGEIAVWNYQSEV
NT seq 999 nt   +upstreamnt  +downstreamnt
atgaaggacactttggcccttctacagaaattcaacgcgcatccagattcccgctgttgg
tatgttgcatggaaccccaagggcacattgctggcctcgtgtggtggtgaccgggccatt
cggatatggggaagggaaggtgactcttgggaatgcaagacagtgctccaggatggacac
cagagagctgtcagaaaggtggcatggtccccatgtggaaactacctggcctcagccagc
tttgatgccacaacctgcatctggaagaagaagaatgatgactttgagtgcttgacagtg
ttggaaggacatgagaatgaggtcaaatgtgtggcctgggccccatccggtaacctgctg
gctacatgtagcagagacaagagtgtctggatctgggaggtggatgaggaggatgagtat
gagtgtgtgagcgtggtgaactctcatacacaggatgtcaagcatgttgtctggcatcca
acacaggagcttctggcctcgtgtagctacgacaacaatgtgtgcgtctataaagaagag
gatgatgactgggagtgcagggcgaccttggagggtcacacctccactgtctggggtttg
acctttgacccaagtggccagagactggcctcgtgcagtgatgaccgtactgtgaagatc
tggaaagaatgtcagcctggaggtgggcagggcacagacacggcttggaaatgtgtttgc
accctttcagggtttcatggacggacagtgtatgatattgcatggtgtccgctgaccggt
gctctggcgactgcatgtggtgatgacggagtgcgtgtgtttaaggaggatgagacggct
gacccagaccagcctgttttctccctgtctgcccatgtacccaaggcccacagccaggat
gtcaactgtatcgcctggaaccccaaggaggctgggctccttgtctcctgcagtgacaat
ggggagatagccgtctggaactaccagtctgaggtctga

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