Oncorhynchus mykiss (rainbow trout): 110536052
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Entry
110536052 CDS
T07259
Name
(RefSeq) vacuolar protein sorting-associated protein 33A isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
omy04148
Efferocytosis
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110536052
04148 Efferocytosis
110536052
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110536052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110536052
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110536052
Hops complex
110536052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
110536052
NCBI-ProteinID:
XP_036791787
Ensembl:
ENSOMYG00000011575
LinkDB
All DBs
Position
11:58363005..58378703
Genome browser
AA seq
599 aa
AA seq
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MSAHLSNGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRLPAADVKNIIFFVRPRLELMDIIAENVISEDKMHSPRDFHILFVPRRSML
CEQRLKEQGVLGSFINIDEYILDLIPYDGDLLSMESEGAFRECYLESDQTSLYHTAKGLM
TLQALYGTIPQIFGKGECARHVANMMLRMKREFAGSQTQILPVFDSLLLLDRNIDLLTPL
ATQLTYEGLIDEVYGITNGYAKLPPEKFAAQKKQGEVGKDLPTEPKKMQLNSAEELYAEI
RDKNFNAIGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDSIAQKDPLIKILRLVCMQSVCNNG
LKQKILDYYKREILQTYGYEHMLTLNNLEKTGLLKPQTSTRNNYPTIRKTLKLWMEDANE
QNPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQ
GENRTTLVFFLGGVTYAEVAALRFLSQMEDGGTEYIIATTKLINGTSWIKSLMDRPEAP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcacttatccaatggaagagtaaatttaaacattttgagggaagcagcgcgg
aaggagctccgtgagtttttggacaaatgtgcaggaagcaaggctattgtgtgggatgaa
tacctgactggaccctttggattgatagcacaatattccttgctgaaggaacatgaggtg
gagaagatgttcaccctcaaaggggggcgtcttcctgctgctgatgtgaaaaatataatc
ttctttgttcgtcccagactggaactgatggatattatagctgagaatgtcatcagtgag
gataagatgcattccccacgtgacttccacatcctgtttgtgccccggcggagcatgctc
tgtgagcagcggctgaaggagcagggggtcctgggctcgttcatcaacatagatgagtac
atcctagacctcatcccttatgatggagacttgctctccatggagtctgagggggccttc
agggaatgctatctagaaagtgaccagacaagtctttaccacaccgccaagggccttatg
accctccaggctctgtatgggaccatcccccagatatttgggaaaggggagtgtgcacgg
catgtagctaatatgatgcttaggatgaagagggagtttgctggcagtcagactcagatc
ctgcctgtgtttgactcactgctgctgctggaccgtaacatagacctgcttacccctctg
gccacacagctcacctatgagggcctcattgacgaagtttatggaatcaccaacggttat
gcgaagttgcctccggagaagtttgctgcccaaaagaagcagggtgaggtgggtaaagac
ctgcccacggagcccaagaagatgcaactcaactcagcggaggagctgtatgctgagata
cgggacaaaaacttcaacgccataggtgctgcactgagcaagaaggccaagatcatctct
gctgcctttgaggagcgacataatgccaaaacagttggcgagataaagcagtttgtgtcc
cagctgccccacatgcaggcagcacggagctcgctggccaatcacacctccatagctgaa
ctcattaaggacatcaccacctcagaggccttctttgataacctgacagtggagcaggag
tttatgactggagttgacacagacaaggttaacacatatattgaggactctattgcccag
aaggatcctctgattaaaatcttacggctggtctgtatgcagtcagtctgcaacaatggc
ctcaagcagaagatattggactactacaagagagagatcctgcagacctatggatatgaa
cacatgcttaccctcaacaacctggagaagacaggtcttctgaagccccagacaagcacc
aggaataactaccccaccatcaggaagacactcaaactttggatggaggatgccaacgaa
cagaaccccaatgacatctcctatgtgtacagtggttatgctcctctcagcatccgtctg
acccaggtgttggccaggcccggctggcgcagcatcgaggaagttctgaagatgctccct
ggtccacactttgaggagagacaacagctgcctgctggtctccataagaaacgccagcag
ggggagaacaggaccaccctggtgttctttctgggaggggtgacttacgcagaagttgct
gccctgcgcttcctgtctcagatggaggatggtggcacagagtacatcattgccactacc
aagctcatcaatggtaccagctggatcaagtctctgatggaccgcccggaggccccctga
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