Oncorhynchus mykiss (rainbow trout): 110536066
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Entry
110536066 CDS
T07259
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110536066 (hip1rb)
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
110536066 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
110536066
NCBI-ProteinID:
XP_021477270
Ensembl:
ENSOMYG00000012773
LinkDB
All DBs
Position
11:58649753..58690358
Genome browser
AA seq
1068 aa
AA seq
DB search
MNSIRQVPSRVKTKRTETNLGAEREHFDKQQLSSISKAINSNEAPVKEKHARRIILGTHR
EKGAFTFWSYALGLPLSSNSILSWKFCHVVHKVLRDGHHNSLQDCMRHHSNIVETGQLWG
NLHDRYGQLVALYAKLLCTKMEFHVKHSEIRANLEVTDEVLERVAGTDINNVFQLTVEVF
DYLDTELRLAETVIRQLNTSIAISTLTSGQCRLSPLIQVIQDCSHLYHFTVKLLFKLHAC
LPADTLQGHRDRFHDQFHSLKTFFNKARDMMYFKRLIQIPKLPESPPNFLHAASLAKHAR
PVVVIPDEDEPEQVDDEDDDPEPLINVSDVTVPSMAVPQQFDIFDQTFGPANGGFDDRDI
QIENLKRDLELLRTDLERVKGEAQRYITQLKSQINSLEAELEEQRVQKQRALVENEQLRM
ELEATRRRNAEHESVQATFGEAETRAQATEQRYNKLKEKHTELVSSHAELLRKSADTVKM
LSATQQTQEEVERTKQQLAFEVDRIKQDADMKLEEQKFEMEKLKREFEEKKAEVERVKGT
LQSNEKVGEQQTRSMSALQAEKERLMHSVSEKEAALSALRHAAQLQQSSLQQERERSTRE
LGELQGRLQEKSSREEQLQQKLLEEQFSLLQGTVSEAESIIQDAVAKLDDPLHIRCTSSP
DYLVSRADATLGSIDKVKRGHSDYLTNMGDVGGLLRALTQFSHLAADTIINGSATAHMAP
TDHADRLTENCRGCATHSLQFLKDLKSKASLQRADPASIRIVVQKILRLGEELRPKGVDV
RQDELGDLVDKEMAATSAAIEEAVRRIDEMMNQARKDTSGVKLEVNERILYSCTDLMKAI
HLLVLTSTDLQKEIVEGGRGAATIKEFYARNSRWTEGLISASKAVGWGATQMVESADKVV
LHTGKYEELIVCSHEIAASTAQLVASSKVKADRNSTKLTALQQASRRVNEMAANVVASTK
TGQENLEDKDTMDFSGMSLIKLKMEEMESQVKVLELENQLGNERLRLGELRKKHYDIAGV
PAAGLSEGNGLAPSSASEPSSPKPSKPSIMRKPALAQKPNLPPKNMFR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatacgacaggtgccttcaagggtgaaaaccaaaaggaccgaaacgaattta
ggtgctgagagggaacattttgataaacagcagctcagcagcatcagcaaagccatcaac
tccaacgaggcgcctgtgaaagagaaacatgcacgccggatcattctggggacccacaga
gagaagggagcctttaccttctggtcctatgccttgggcctccctttgtccagcaactcc
atcctcagctggaagttctgccacgtggtgcacaaagtgttgcgggatggccaccataac
agccttcaggactgcatgagacatcacagtaacatagttgaaacagggcaactatggggc
aaccttcatgacagatatggccagctggtggctctgtacgctaagctcctctgcacaaag
atggagttccacgtgaagcattctgaaatccgagccaacctagaggtaacagatgaggtt
ctggagcgcgttgcaggaacagacatcaataatgtgttccagctcactgtggaagtgttt
gattacctggatacagagctgaggctagccgagacagtgatccggcagctcaacacgtcc
attgccatctctacgctgacgtcaggccagtgtcgcctgtcccccctcatccaggtcatt
caggactgcagtcacctctaccacttcaccgtcaagctgctcttcaagctgcacgcttgt
ctcccagcagacaccctgcaaggacatcgtgatcgtttccatgaccagttccacagcctc
aagaccttcttcaacaaagccagagacatgatgtacttcaagagactcatccagatcccc
aagctgccagaatcccctcctaatttcctgcatgcggcttccctggccaagcatgcaagg
ccagtggtggtcatcccagacgaggatgagcccgagcaggtggatgatgaagatgacgac
cctgaaccgctgatcaatgtcagtgacgtcaccgtgcccagcatggcggtgccacagcag
ttcgacatatttgatcaaacctttggacctgccaatggtggttttgatgacagggatatc
cagattgagaacctcaagcgggacttggagctattgaggacagatctggaaagggtcaaa
ggagaggcccagcgctacatcactcagcttaagtcccagatcaacagtctggaggcggag
ctggaggagcagcgggtacagaaacagcgtgccttggtggagaacgagcagctgcgcatg
gagctggaggccacacgccgccgcaatgctgagcatgagagtgtgcaggccaccttcgga
gaggccgagacaagagcccaggccacagagcagcgctataacaagctgaaggagaagcac
actgagctagtgtctagccatgcggaactgctcaggaagagtgcagacacagtgaagatg
ctgtcagccacccagcagactcaggaggaggtggagaggactaagcagcagttggctttt
gaggtggatcgcatcaaacaggatgctgacatgaagcttgaggagcagaagtttgagatg
gagaagcttaaaagagagtttgaggagaagaaggcagaagtggaacgtgtcaaaggcact
ctgcagagcaacgagaaggtgggggaacagcagaccagatccatgtccgccctgcaggcg
gagaaggaacgtctgatgcactctgtgagtgagaaggaggcagcactgtcagccctgcgc
catgctgcacagctgcagcagtcatccctgcagcaggagagggagaggagcaccagggag
ctgggagagctgcagggcaggctgcaggagaagtctagccgtgaggagcagctgcagcag
aagctgctggaggagcagttctctctgctgcagggaacggtctctgaggctgagagcatc
atccaggatgctgtggccaaactggatgaccccctgcacatccgctgcaccagctcccca
gattaccttgtcagtcgggctgatgccactttaggctccattgacaaagtgaaaaggggt
cactcagactacctgacaaacatgggagatgttggtgggctgctgagggccctgacccag
ttctcccacctggctgctgacaccatcatcaacggcagtgccacagcgcacatggctccc
accgaccacgccgaccgtctgactgagaattgcaggggctgtgccactcatagtctgcag
ttcctgaaggacctcaagtccaaggcctctctccagagggcagatccggcctccattcgc
attgtggtccaaaagatcctgaggctgggggaggagctgcgacctaaaggcgtggatgtg
cgacaggatgagctgggagatctggtggacaaggagatggcagcaacatcagcagccatt
gaggaggcagtgcgcagaatcgatgaaatgatgaatcaggcacgaaaggacacctctggc
gtcaaacttgaggtcaatgaacgaatcctctacagctgcacagacctgatgaaggccatc
catctactggtcctgacatcaaccgacctacagaaggagattgttgagggagggaggggt
gcagccactattaaggaattctacgccaggaactcccgttggactgagggactcatctct
gcctccaaagctgtgggatggggagccacacagatggttgagtctgctgataaagtggtg
ctgcacactggtaaatatgaggagctcatcgtctgttcacacgagatcgctgctagtaca
gcacagctggttgcttcctccaaggtaaaggcagaccgcaacagtacgaaactgacagct
ctccagcaggcatctcgccgtgtgaacgagatggcggccaacgtggtggcctccaccaag
acaggccaggagaacctagaggacaaggataccatggacttctctggaatgtccctcatc
aagttaaaaatggaggaaatggagtcgcaggtgaaggtgttggagctagagaatcagctg
ggtaatgagcgtctgcgtctgggagagctcaggaagaagcactatgatatagcaggtgtt
ccagcagcaggcctctcagagggcaatggcctggccccttcatctgcctctgagccctcc
tcacccaaaccctccaagcctagcatcatgaggaaacctgccttggctcagaaacccaac
ttaccacctaaaaatatgttcaggtag
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integrated database retrieval system
