Oncorhynchus mykiss (rainbow trout): 110536082
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Entry
110536082 CDS
T07259
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110536082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110536082
Spliceosome [BR:
omy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
110536082
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
110536082
NCBI-ProteinID:
XP_021477298
Ensembl:
ENSOMYG00000016120
LinkDB
All DBs
Position
11:59047677..59052881
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AA seq
494 aa
AA seq
DB search
MVSVKREREIDLEDDEVPVKIGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHIN
VYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV
LKPTFTRQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLRNY
FLEEENYCGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQ
ITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPEEKVAL
LLKEEYQEEMSDTTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYKTY
KENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQVTEK
NTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWK
RRESEDDTTNHTGA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgtaaaacgggagcgagaaattgacttggaagacgatgaagtacctgtgaaa
attggccgttcgtccgaggaccgcagaagtcgccattgtccctacctcgacacaatcaat
aggagtgtactggacttcgattttgagaagctgtgctccatttccctttcccacatcaat
gtatacgcctgtctcatctgtgggaaatacttccaaggtagaggtctgaagtcccatgcc
tacactcacagtgtgcagttcacccaccatgtgttcctcaatctgcacaccctcaagttc
tactgtctgccagataactacgagatcattgactcatcgttggaagacatcacgtatgta
ctgaagcccacattcaccagacagcacatctctggattggataagcagggaaagctgtat
cgagcctatgatggcaccacctatctgcctggcatcgtagggctcaacaacatcaaggct
aatgactacgctaatgtggtgctgcaggccctgtccaatgtgcccccactgcggaactac
tttttggaagaggagaattactgcggcatccgtaggccgccgggtgacatcatgttcctg
ctggtgcagcgattcggtgagctgatgcgcaagctgtggaacccacggaacttcaaggcc
catgtgtcgccccacgagatgttgcaggccgtagtgctgtgcagcaagaagaacttccag
atcaccaagcaaggggatgctgtggacttcctgtcatggttcatgaatgctctgcacggt
gcactgggaggaaccaagaagaaaccctcaagccttaccaaagtgttccagggttccatg
cggatcttctccaagaagcttcctcacccagatttgccaccagaagagaaggtggctctg
cttctgaaggaggagtaccaggaggagatgtctgacaccaccttcctcttcttgaccctt
gacctccccacagccccgctgtacaaggatgaaaaggagcagctcatcatcccacaggtc
cccctcttcaacatcctggccaagttcaatggcaacacagagaaggagtataaaacatac
aaagagaatttcctcaagaggttccagttgctcaagctgcccccctatctcatcttctgc
atcaagaggtttaccaagaacaacttctttgtggagaagaaccccaccattgtcaacttc
cccatcacgaacgtagaccttcgtgagtatctgacagaggaagcacaggtcacagagaag
aacacaacctatgacctggtggccaatgtggtgcatgatgggaagcccactgagggggca
tacagaatacatgtcctgcatcatggcactggaaagtggtacgagctccaggacctgcag
gtgacagatatcctgccccagatgatcacactgtcagaggcttacattcagatttggaaa
agaagagagagcgaagatgacacaactaaccacactggggcgtga
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