Oncorhynchus mykiss (rainbow trout): 110536111
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Entry
110536111 CDS
T07259
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110536111
03036 Chromosome and associated proteins [BR:
omy03036
]
110536111
Spliceosome [BR:
omy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110536111
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
110536111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
110536111
NCBI-ProteinID:
XP_021477349
Ensembl:
ENSOMYG00000003752
LinkDB
All DBs
Position
11:complement(60254373..60276007)
Genome browser
AA seq
961 aa
AA seq
DB search
MAATGNAEETQLQEMEEEAGMEREMDSDEEEGMGIENSDDEEDDSSEDDKENEAEIQRLE
EQLSINAFDYNCHLDLIKLLRQEGELPPLRKARQKMSELFPLTEEIWLDWLKDEIRLTEE
EQNREKVYELFEMAVKDYICPEIWLEYAQYSIGGMGLPGGMEKVRSIFERALTAVGLHMT
KGATLWEAYREFENVILATVQPPPGSVPTCEQQELLNAQLERIHTLFRRQLAIPLMDMEG
TYAEYEEWSDQGVSDTVSQKYKRALQQMEKSKPYEETLMAAEPPKLAEYQTYIDYEQKEG
DPARIQIIFERALAENCLVPDMWAKYTKYLDRQLKIKDLVLSSHDRAVRNCPWTMGLWKN
YLLALERHGADHHTISDVFEKALNAGFIQATDYVNIWEAYLDYLRRRVDFSKGESTLTLE
SSRELEELRAAFTRSLDYMKQDVEERFSESGDPSCTIMQVWAKIEALHCKNIQKARELWD
SIMTKGNAKFANMWLEYYNLERSYGDALHCRKALHRAVQCTSDYPEHVCEVLLTFERVEG
SLEDWDAAVQKTETRLNRVNEQRAKSLSQVAEKEAHLVRQEEEKTEQRRRAKADKKNQKK
GQKGSGPGEKRKAEDEDNENEWGEESEQPPKRHRGEGNQGSFRGGGAEEYMETESGLFGR
RAPPCRRQEPPGAKRGQQMAPATVRKTQEDNPEQRKDDCSVFISNLAFNMEDPEKRLKEL
FEPCGPVQSVRPVYAAKGFRGYCYVQFEGKTSVPEALKMDRREVDGRPMFVSPCVDKNKN
PDFKVFKYNTNLEKHKIFISGLPFSCTKEQLEELCKDQGTIKDIRLVTNRSGKPKGLAYV
EFEDEAQASQAVLKLDGTVLQEHTLSVAISNPPRRNAADKPDFSRPMGAMMPRAMVYGSR
GKGRTQLSLIPRSLHRQTGSESKAENGTAPKPTGGASGDAGFEAQAKPMSNSDFAKMLLR
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacggggaacgcagaagagacgcagttgcaagagatggaggaagaggcaggg
atggagagagaaatggattcagatgaagaggagggtatgggaatcgaaaattccgacgat
gaagaagacgattcgtcagaagatgataaagagaatgaagccgaaattcagcgtttggag
gagcagctgtccatcaatgcttttgactacaactgtcatttggacctcataaaactcctg
aggcaggagggggaactgcctccactgcgtaaggcaaggcagaagatgagtgagctcttc
ccactgactgaagagatatggctggactggctcaaggatgagatccgcctaaccgaggag
gagcagaaccgggagaaagtctacgagctctttgagatggctgtgaaagattatatctgc
cctgaaatctggctggagtatgcccagtactctatcgggggcatgggactgcctggtggg
atggagaaggtgaggtccatcttcgagagagccctgacagccgtggggctgcacatgacc
aagggggcgactctgtgggaggcctacagggagtttgagaacgtcatactggcaactgtt
cagcctcctcctggcagcgtccccacctgcgagcagcaggagcttctgaacgctcagctc
gaacgcatccacactcttttccgccgccagctggccatccccttaatggacatggaagga
acatatgcagagtatgaggagtggtctgaccagggggtgtctgatacagtctcccagaag
tacaagagggccctgcaacagatggagaagagcaagccttatgaggagactttgatggca
gccgagccacccaagctagcagaatatcagacctatattgactatgagcaaaaggagggt
gacccggcacggatccagatcatctttgagcgggcactggcagagaactgcctggtacca
gacatgtgggccaagtacaccaagtacctggatcgtcaactaaaaatcaaagacctggtc
ctgtcctctcacgaccgtgcggtcaggaactgcccctggaccatgggcctgtggaagaac
tacctgcttgccctggagaggcatggggctgaccaccacactatctcagacgtttttgaa
aaggccctgaatgccggattcatacaagctacagattatgttaatatctgggaagcgtac
ctcgattacctgaggcggcgtgtcgatttcagcaaaggtgaaagcaccttaacattggag
tcgagcagagagctggaggagctgcgggcagccttcacccgttctctagactatatgaaa
caggacgtggaagagagatttagtgaaagtggagacccttcctgtaccatcatgcaggtc
tgggcaaagatagaggccctgcattgtaagaacattcagaaagctagagaactgtgggac
agcatcatgacaaaagggaatgccaaattcgccaacatgtggctggagtactataacctg
gagaggtcgtacggagatgctcttcactgcagaaaagccctccacagggccgtccagtgt
acctccgactaccctgagcatgtgtgtgaggtcctgctcacctttgagagggttgagggg
tctctggaggactgggatgcagcggtgcagaagactgagacgaggctgaacagagtcaac
gagcagagggccaagtccctctctcaggtggcagagaaagaggctcatctggtccgacag
gaggaggagaagactgaacagcggcggagggccaaggcagacaagaagaaccaaaagaag
ggacagaaaggcagcgggcctggggagaagcggaaggcagaggatgaggataacgagaat
gagtggggggaggaatcggagcaacctccaaagaggcaccgaggggagggcaaccagggc
agcttcaggggaggaggtgctgaggagtacatggagacagagagtggactgtttgggagg
agagcccccccttgccgcagacaggaaccccctggtgctaagaggggccaacagatggca
ccagccaccgtacggaagacccaggaagacaaccccgaacaacgcaaggatgactgcagt
gtgtttatcagcaacctggccttcaacatggaggatccagagaagagactgaaggagttg
tttgagccctgtggtcctgtccagtcggtgcgccccgtctatgctgccaagggcttcaga
gggtactgctacgtacagtttgagggcaagacgtccgtgcccgaggccctgaagatggac
cggcgtgaggtcgatggcaggccaatgttcgtatcgccttgtgtggataaaaacaagaac
cctgattttaaggtgtttaagtacaacacaaacctagagaaacacaagatctttatctcg
ggcctgcccttttcctgcaccaaggagcagctggaggagctgtgcaaggatcaaggcacc
atcaaagacatccgcctggtcaccaaccgctcaggcaaacccaagggtctggcgtacgtg
gagtttgaagatgaggctcaggcctctcaggccgtgctgaagttggatggcacggtacta
caggaacacacactctctgttgccattagcaacccacctcgcagaaatgcagccgacaag
cctgacttcagcaggcccatgggagccatgatgccccgggctatggtctatggatcgagg
ggaaaagggcgaacccaactctcactaatccctcgttccctacatcggcagactggatca
gaaagtaaagcagaaaatgggactgcacctaaacccacagggggtgcatccggagacgct
gggtttgaagcacaggccaagcccatgtccaattcagactttgccaaaatgcttctcaga
aagtga
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integrated database retrieval system
