Oncorhynchus mykiss (rainbow trout): 110536120
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Entry
110536120 CDS
T07259
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110536120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110536120
Enzymes [BR:
omy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
110536120
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110536120
Prokaryotic type
110536120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
110536120
NCBI-ProteinID:
XP_021477375
Ensembl:
ENSOMYG00000006003
LinkDB
All DBs
Position
11:60509773..60518067
Genome browser
AA seq
303 aa
AA seq
DB search
MLAMNVPYLRRSPIMFLAAPLTATCVSPTLHFAQYTKVKKLKLSGNGTTESPPSPVCPEL
LARIAKNKQAALEKLSASNTPDAFGESWRKSLVSEFGKPYFINLMSFVNGERKLNTVYPP
PQHVFTWTQMCDIQDVKVVVLGQDPYHGPNQAHGLCFSVQRPIPPPPSLLNMYKELASDI
EGFQHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSSNREGLV
FMLWGAYAQKKGAAIDRKRHHVLPTVHPSPLSAHRGFFGCKHFSKTNELLEKSGKEPIDW
KAL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaatgaatgtaccatatttgagacgttctccaataatgtttttagctgcacca
ttaacagccacatgtgtttcaccaaccttgcattttgctcaatataccaaggtgaagaag
ctgaagctatcaggcaacggaacgacggagtcacccccttctccagtgtgtccagaactg
ctggcccgaatcgccaaaaacaagcaagctgcgttggagaaactgtccgccagtaacaca
ccggatgcatttggggagagttggagaaagagtttggtctctgagtttggaaagccttat
ttcataaacttgatgtctttcgttaatggagagaggaaactgaacactgtctacccaccc
cctcagcatgttttcacctggacacagatgtgtgacatccaagatgtcaaggttgtagtc
ctcggtcaggacccatatcacggtccaaaccaagcccatggattatgcttcagtgtgcag
agacctatcccacctccacccagcttgttgaatatgtacaaagaattggcgtctgatata
gagggcttccagcaccctggacatggagatttaactggatgggctaaacaaggtgtcttg
ctgctcaatgctgtgctgaccgtccgagctcaccaggccaactctcacaaagacaagggc
tgggaaactttcactgacgctgtggtgcagtggctcagctccaaccgggagggcctcgtc
ttcatgctgtggggggcctatgctcagaagaagggagcagctattgataggaaacgtcac
catgtccttcccactgtacacccctcccctttatctgctcatcgaggcttctttggatgc
aagcacttttccaagaccaatgagttgctggagaaatcagggaaggagcccatagactgg
aaggcactttga
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