Oncorhynchus mykiss (rainbow trout): 110536144
Help
Entry
110536144 CDS
T07259
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110536144
09122 Translation
03013 Nucleocytoplasmic transport
110536144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110536144
03041 Spliceosome [BR:
omy03041
]
110536144
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110536144
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110536144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
110536144
NCBI-ProteinID:
XP_036791905
Ensembl:
ENSOMYG00000012056
LinkDB
All DBs
Position
11:60871789..60906526
Genome browser
AA seq
694 aa
AA seq
DB search
MSDALKKRKSKVLRSEMGTPEVKRGRGEGDQVSTGEERGGQQDVRVYSEEVELDGRDPEE
DYQQYKLTCEALAQLMNDIQELKANGAKDGCAEVEQKRMQSCIHFMSLKKLNRLAHMRLK
RGRDQTHEGKQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSVDEFYQEAP
PEVSRTPLTKDDTHQLTLARLDWELEQRKRLAEQYKESLSSKEKIQKGIEVKKEHLSSLQ
PGLNAIMQASLPVQEYLSMPFEQTQRQTEIARHLPTSLYVLLVQASAYGQACDKSLSVSI
SGDVDEAKALSKPPEDSQDDDSGDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSL
CLDLRCKDGSVLHLFFYYLMNLNIMTVKAKVSTATDLTGAISAGELLNSGTLLNCLYAND
QGCETPNPSNRYQFDKVGISSFGDYVAEMGHPYLWVQSLGGLKFPSDAPEGLHAGSSLSA
SHMESTMKLLRGRVLSRMALHKQFSSLEHSIVPVSSECKHLFPAKVLSRLARWTTITHQE
YTNLVFTQHVSEAGLARETDLFFMAVLERGTARLQAAVVLNPRYPVISPLFAVSISWKGE
RSGRTDDNLRAMESEVNVFKSELQGPRPGHQLLTNQVARLGVCLDVYLETDGQDDSVEGP
REFPREKMCLRTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccctgaagaagcgcaagtcgaaggttctccgcagcgagatgggcacaccg
gaggtgaaacgtggccgtggagagggggaccaggtgagcactggagaggagaggggtgga
cagcaggatgtacgtgtgtatagtgaggaggtggagctggatggcagggacccagaggag
gactaccagcagtataaactaacctgtgaagctctggcccaactgatgaacgatatccag
gagctgaaagccaacggcgccaaggatgggtgtgctgaggtagaacagaagaggatgcag
agctgtatccactttatgagtctgaagaaactcaaccgcctggctcacatgagactgaag
agggggagagaccagacgcatgagggcaagcagagagtagatgtgttgcacctgcagctc
cagaacctgctctatgaggtcatgcacctgcagaaggagattagcaagtgtctggagttc
aagtcaaagcatgaggagatagatcttgtgagtgtagatgagttctaccaggaggccccc
cctgaggtatcccgcacccccctcaccaaggacgacacccaccaactcacgctggccagg
ctggactgggaactggagcaaaggaagaggctggctgagcagtacaaggagtctctctcc
agtaaggagaagatccagaaaggcattgaggtgaagaaggaacacctgagttctctacag
cctggactcaacgctatcatgcaggcatccctcccagtccaggagtatctctccatgcca
tttgaacagacccagagacagaccgagatcgcccgccaccttcccacctctctctatgtc
ctactggtacaggccagtgcttacggacaggcctgcgataagagcctgagtgtgtccatc
agtggagacgtggacgaggccaaagctctgtctaaacctccagaggactcccaggatgat
gattctggggattctgatgcagaggaggaacaggagaaaacgaagaggaggagacctact
acaggtggacagctggatgataagagacgtgaaatgctgaagagacaccctctatccctc
tgcctagacctcagatgcaaagacggcagtgtgctgcatctgttcttctactacctgatg
aacctgaacatcatgactgtcaaggccaaagtctccaccgccacagatctcactggagcc
atcagcgccggggagctgttaaactctggcacgctgctcaactgcctgtatgccaacgac
caggggtgcgaaacgcccaacccctctaaccgctaccagtttgataaagtggggatcagt
tcatttggagattacgtggcagaaatgggtcatccctacctgtgggtgcagagtctggga
ggactgaagttccccagtgatgccccagagggtttgcatgcaggcagttctctgagtgcc
agtcacatggaaagcaccatgaagctgctgagaggacgagtcctgtcacgcatggccctg
cacaaacagttctcctcactagagcacagtattgttccagtgtccagtgagtgcaagcac
ctgttccctgctaaggttctctctcgcctggctcgctggactaccatcacacaccaggag
tacacgaatctggtgttcacgcagcatgtgtcagaagcaggtctggctcgggaaactgac
ctcttcttcatggccgtgttggagagaggaacagctcgtcttcaggctgcggtggtgttg
aacccccgttacccagtcatttctcctctcttcgctgtctcaatcagctggaagggggag
cgcagtggacgtactgacgacaaccttcgagccatggagagtgaggtgaacgttttcaaa
tcagagctccaggggccccgcccaggccaccagctgctgaccaatcaggtagctcgtctg
ggtgtctgtctggatgtgtacctggaaactgatggacaggacgacagtgtggagggacca
cgggagttccccagagagaagatgtgtctacgcactgtcaggggtccgaaccgtctgaag
ccattcaagtacaaccacccccagggcttctttagtcaccgctga
DBGET
integrated database retrieval system
